RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 HSD3B7Q9H2F3 369 aa26.51■■□□□ 1.83
RAB40B-201ENST00000269347 PCDHA5Q9Y5H7 936 aa26.51■■□□□ 1.83
RAB40B-201ENST00000269347 IGKV6D-41A0A0C4DH26 115 aa26.5■■□□□ 1.83
RAB40B-201ENST00000269347 YDJCA8MPS7 323 aa26.5■■□□□ 1.83
RAB40B-201ENST00000269347 CAVIN2O95810 425 aa26.5■■□□□ 1.83
RAB40B-201ENST00000269347 PTGS1P23219 599 aa26.5■■□□□ 1.83
RAB40B-201ENST00000269347 CCDC144BQ3MJ40 725 aa26.5■■□□□ 1.83
RAB40B-201ENST00000269347 CNNM3Q8NE01 707 aa26.5■■□□□ 1.83
RAB40B-201ENST00000269347 UBA5Q9GZZ9 404 aa26.5■■□□□ 1.83
RAB40B-201ENST00000269347 GREB1LQ9C091 1923 aaPredicted RBP26.5■■□□□ 1.83
RAB40B-201ENST00000269347 ACTN4O43707 911 aaKnown RBP26.5■■□□□ 1.83
RAB40B-201ENST00000269347 PTGDRQ13258 359 aa26.5■■□□□ 1.83
RAB40B-201ENST00000269347 ZNF579Q8NAF0 562 aaKnown RBP26.5■■□□□ 1.83
RAB40B-201ENST00000269347 STK32BQ9NY57 414 aa26.5■■□□□ 1.83
RAB40B-201ENST00000269347 MTMR4Q9NYA4 1195 aa26.5■■□□□ 1.83
RAB40B-201ENST00000269347 TCP10Q12799 353 aa26.49■■□□□ 1.83
RAB40B-201ENST00000269347 CCDC178Q5BJE1 867 aa26.49■■□□□ 1.83
RAB40B-201ENST00000269347 SH3BP5LQ7L8J4 393 aa26.49■■□□□ 1.83
RAB40B-201ENST00000269347 HEATR3Q7Z4Q2 680 aa26.49■■□□□ 1.83
RAB40B-201ENST00000269347 BLIDQ8IZY5 108 aa26.49■■□□□ 1.83
RAB40B-201ENST00000269347 ZNF287Q9HBT7 754 aa26.49■■□□□ 1.83
RAB40B-201ENST00000269347 PYCARDQ9ULZ3 195 aa26.49■■□□□ 1.83
RAB40B-201ENST00000269347 FRMPD2Q68DX3 1309 aaPredicted RBP26.49■■□□□ 1.83
RAB40B-201ENST00000269347 PLIN4Q96Q06 1357 aa26.49■■□□□ 1.83
RAB40B-201ENST00000269347 NT5C2P49902 561 aa26.48■■□□□ 1.83
RAB40B-201ENST00000269347 DDTLA6NHG4 134 aaPredicted RBP26.48■■□□□ 1.83
RAB40B-201ENST00000269347 C21orf2O43822 256 aa26.48■■□□□ 1.83
RAB40B-201ENST00000269347 TOP1P11387 765 aaKnown RBP26.48■■□□□ 1.83
RAB40B-201ENST00000269347 CASP1P29466 404 aa26.48■■□□□ 1.83
RAB40B-201ENST00000269347 TMX4Q9H1E5 349 aaPredicted RBP26.48■■□□□ 1.83
RAB40B-201ENST00000269347 VAT1LQ9HCJ6 419 aa26.48■■□□□ 1.83
RAB40B-201ENST00000269347 FAM198AQ9UFP1 575 aa26.48■■□□□ 1.83
RAB40B-201ENST00000269347 SERPINB13Q9UIV8 391 aa26.48■■□□□ 1.83
RAB40B-201ENST00000269347 PCDHA6Q9UN73 950 aa26.48■■□□□ 1.83
RAB40B-201ENST00000269347 PCDHA4Q9UN74 947 aa26.48■■□□□ 1.83
RAB40B-201ENST00000269347 PCDHA8Q9Y5H6 950 aa26.48■■□□□ 1.83
RAB40B-201ENST00000269347 COL4A5P29400 1685 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 GOLGA6L19H0YKK7 550 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 MCM7P33993 719 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 ATP2C1P98194 919 aaPredicted RBP26.47■■□□□ 1.83
RAB40B-201ENST00000269347 STRIP1Q5VSL9 837 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 SARM1Q6SZW1 724 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 HOMER1Q86YM7 354 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 C4orf32Q8N8J7 132 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 SYMPKQ92797 1274 aaKnown RBP26.47■■□□□ 1.83
RAB40B-201ENST00000269347 ZDHHC15Q96MV8 337 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 BRMS1Q9HCU9 246 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 MYH4Q9Y623 1939 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 BECN2A8MW95 431 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 PDHBP11177 359 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 LRMPQ12912 555 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 CCDC186Q7Z3E2 898 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 BARHL2Q9NY43 387 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 CEP131Q9UPN4 1083 aa26.47■■□□□ 1.83
RAB40B-201ENST00000269347 PARP1P09874 1014 aaKnown RBP26.46■■□□□ 1.83
RAB40B-201ENST00000269347 PIGSQ96S52 555 aa26.46■■□□□ 1.83
RAB40B-201ENST00000269347 VWA3AA6NCI4 1184 aa26.46■■□□□ 1.83
RAB40B-201ENST00000269347 ARID5BQ14865 1188 aa26.46■■□□□ 1.83
RAB40B-201ENST00000269347 SPZ1Q9BXG8 430 aa26.46■■□□□ 1.83
RAB40B-201ENST00000269347 GNAQP50148 359 aa26.45■■□□□ 1.82
RAB40B-201ENST00000269347 SH3GLB2Q9NR46 395 aa26.45■■□□□ 1.82
RAB40B-201ENST00000269347 FAM13BQ9NYF5 915 aa26.45■■□□□ 1.82
RAB40B-201ENST00000269347 MORC2Q9Y6X9 1032 aaPredicted RBP26.45■■□□□ 1.82
RAB40B-201ENST00000269347 CNKSR1Q969H4 720 aa26.44■■□□□ 1.82
RAB40B-201ENST00000269347 BPIFA3Q9BQP9 254 aa26.44■■□□□ 1.82
RAB40B-201ENST00000269347 CLIP2Q9UDT6 1046 aa26.44■■□□□ 1.82
RAB40B-201ENST00000269347 KIAA2012Q0VF49 1180 aa26.44■■□□□ 1.82
RAB40B-201ENST00000269347 POSTNQ15063 836 aa26.44■■□□□ 1.82
RAB40B-201ENST00000269347 DHX58Q96C10 678 aa26.44■■□□□ 1.82
RAB40B-201ENST00000269347 MAN1B1Q9UKM7 699 aa26.44■■□□□ 1.82
RAB40B-201ENST00000269347 CDC25AP30304 524 aa26.43■■□□□ 1.82
RAB40B-201ENST00000269347 TMEM60Q9H2L4 133 aa26.43■■□□□ 1.82
RAB40B-201ENST00000269347 ATP1A3P13637 1013 aa26.43■■□□□ 1.82
RAB40B-201ENST00000269347 SARSP49591 514 aaKnown RBP26.43■■□□□ 1.82
RAB40B-201ENST00000269347 RBM5P52756 815 aaKnown RBP eCLIP26.43■■□□□ 1.82
RAB40B-201ENST00000269347 INF2Q27J81 1249 aa26.43■■□□□ 1.82
RAB40B-201ENST00000269347 KCNA3P22001 575 aa26.42■■□□□ 1.82
RAB40B-201ENST00000269347 TTBK2Q6IQ55 1244 aa26.42■■□□□ 1.82
RAB40B-201ENST00000269347 MED15Q96RN5 788 aa26.42■■□□□ 1.82
RAB40B-201ENST00000269347 SNHG28P0DPA3 235 aa26.41■■□□□ 1.82
RAB40B-201ENST00000269347 C10orf71Q711Q0 1435 aa26.41■■□□□ 1.82
RAB40B-201ENST00000269347 STAMQ92783 540 aa26.41■■□□□ 1.82
RAB40B-201ENST00000269347 NAT10Q9H0A0 1025 aaKnown RBP26.41■■□□□ 1.82
RAB40B-201ENST00000269347 OFD1O75665 1012 aa26.4■■□□□ 1.82
RAB40B-201ENST00000269347 CALML3P27482 149 aa26.4■■□□□ 1.82
RAB40B-201ENST00000269347 DRC7Q8IY82 874 aa26.4■■□□□ 1.82
RAB40B-201ENST00000269347 DAGLBQ8NCG7 672 aa26.4■■□□□ 1.82
RAB40B-201ENST00000269347 RIOX1Q9H6W3 641 aa26.4■■□□□ 1.82
RAB40B-201ENST00000269347 TDRD3Q9H7E2 651 aaKnown RBP26.4■■□□□ 1.82
RAB40B-201ENST00000269347 GPCPD1Q9NPB8 672 aa26.4■■□□□ 1.82
RAB40B-201ENST00000269347 JAG1P78504 1218 aa26.4■■□□□ 1.82
RAB40B-201ENST00000269347 ZMYND12Q9H0C1 365 aa26.4■■□□□ 1.82
RAB40B-201ENST00000269347 LMOD1P29536 600 aaPredicted RBP26.39■■□□□ 1.82
RAB40B-201ENST00000269347 AFMP43652 599 aa26.39■■□□□ 1.82
RAB40B-201ENST00000269347 ZRSR1Q15695 479 aaKnown RBP26.39■■□□□ 1.82
RAB40B-201ENST00000269347 NT5DC1Q5TFE4 455 aa26.39■■□□□ 1.82
RAB40B-201ENST00000269347 SH3RF1Q7Z6J0 888 aa26.39■■□□□ 1.82
RAB40B-201ENST00000269347 ELOA2Q8IYF1 753 aaPredicted RBP26.39■■□□□ 1.82
RAB40B-201ENST00000269347 CACTINQ8WUQ7 758 aaKnown RBP26.39■■□□□ 1.82
RAB40B-201ENST00000269347 FERMT2Q96AC1 680 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms