RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 MORC3Q14149 939 aa21.64■■□□□ 1.05
CPNE7-201ENST00000268720 SBK1Q52WX2 424 aa21.64■■□□□ 1.05
CPNE7-201ENST00000268720 FAM196AQ6ZSG2 479 aa21.64■■□□□ 1.05
CPNE7-201ENST00000268720 SH3RF3Q8TEJ3 882 aaPredicted RBP21.64■■□□□ 1.05
CPNE7-201ENST00000268720 MKRN1Q9UHC7 482 aaKnown RBP21.64■■□□□ 1.05
CPNE7-201ENST00000268720 HOOK1Q9UJC3 728 aaKnown RBP21.64■■□□□ 1.05
CPNE7-201ENST00000268720 CTNND2Q9UQB3 1225 aa21.64■■□□□ 1.05
CPNE7-201ENST00000268720 TFAP4Q01664 338 aa21.63■■□□□ 1.05
CPNE7-201ENST00000268720 PARP3Q9Y6F1 533 aa21.63■■□□□ 1.05
CPNE7-201ENST00000268720 UBAP1LF5GYI3 381 aa21.63■■□□□ 1.05
CPNE7-201ENST00000268720 RBL2Q08999 1139 aa21.63■■□□□ 1.05
CPNE7-201ENST00000268720 PTGDRQ13258 359 aa21.63■■□□□ 1.05
CPNE7-201ENST00000268720 PHLPP2Q6ZVD8 1323 aa21.63■■□□□ 1.05
CPNE7-201ENST00000268720 RNF225M0QZC1 329 aaPredicted RBP21.63■■□□□ 1.05
CPNE7-201ENST00000268720 STAG2Q8N3U4 1231 aa21.63■■□□□ 1.05
CPNE7-201ENST00000268720 SLC44A5Q8NCS7 719 aa21.63■■□□□ 1.05
CPNE7-201ENST00000268720 ZCCHC17Q9NP64 241 aaKnown RBP21.63■■□□□ 1.05
CPNE7-201ENST00000268720 PES1O00541 588 aaKnown RBP21.62■■□□□ 1.05
CPNE7-201ENST00000268720 LDHBP07195 334 aaKnown RBP21.62■■□□□ 1.05
CPNE7-201ENST00000268720 SCG2P13521 617 aa21.62■■□□□ 1.05
CPNE7-201ENST00000268720 TRAPPC3LQ5T215 181 aa21.62■■□□□ 1.05
CPNE7-201ENST00000268720 SPECC1LQ69YQ0 1117 aa21.62■■□□□ 1.05
CPNE7-201ENST00000268720 SPATA20Q8TB22 786 aa21.62■■□□□ 1.05
CPNE7-201ENST00000268720 PAGE5Q96GU1 130 aa21.62■■□□□ 1.05
CPNE7-201ENST00000268720 VPS16Q9H269 839 aa21.62■■□□□ 1.05
CPNE7-201ENST00000268720 PUF60Q9UHX1 559 aaKnown RBP21.62■■□□□ 1.05
CPNE7-201ENST00000268720 PNMA6AP0CW24 399 aaPredicted RBP21.62■■□□□ 1.05
CPNE7-201ENST00000268720 USP5P45974 858 aa21.62■■□□□ 1.05
CPNE7-201ENST00000268720 GYS2P54840 703 aa21.62■■□□□ 1.05
CPNE7-201ENST00000268720 BMS1Q14692 1282 aaKnown RBP21.62■■□□□ 1.05
CPNE7-201ENST00000268720 TTC38Q5R3I4 469 aa21.62■■□□□ 1.05
CPNE7-201ENST00000268720 C12orf60Q5U649 245 aa21.62■■□□□ 1.05
CPNE7-201ENST00000268720 LRRC4BQ9NT99 713 aa21.62■■□□□ 1.05
CPNE7-201ENST00000268720 KIAA1551Q9HCM1 1747 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 USP17L3A6NCW0 530 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 USP17L4A6NCW7 530 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 NLRP5P59047 1200 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 RAD9BQ6WBX8 426 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 USP17L1Q7RTZ2 530 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 DLEC1Q9Y238 1755 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 ZNF18P17022 549 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 ERCC3P19447 782 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 GRAPQ13588 217 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 IL17AQ16552 155 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 MLKLQ8NB16 471 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 ACRBPQ8NEB7 543 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 GRAPLQ8TC17 118 aaPredicted RBP21.61■■□□□ 1.05
CPNE7-201ENST00000268720 BRMS1Q9HCU9 246 aa21.61■■□□□ 1.05
CPNE7-201ENST00000268720 TADA3O75528 432 aa21.6■■□□□ 1.05
CPNE7-201ENST00000268720 PLA2G4AP47712 749 aa21.6■■□□□ 1.05
CPNE7-201ENST00000268720 PLCD1P51178 756 aa21.6■■□□□ 1.05
CPNE7-201ENST00000268720 CUL4BQ13620 913 aa21.6■■□□□ 1.05
CPNE7-201ENST00000268720 CNBD1Q8NA66 436 aa21.6■■□□□ 1.05
CPNE7-201ENST00000268720 TGFBRAP1Q8WUH2 860 aa21.6■■□□□ 1.05
CPNE7-201ENST00000268720 ARHGAP6O43182 974 aa21.6■■□□□ 1.05
CPNE7-201ENST00000268720 CCP110O43303 1012 aa21.6■■□□□ 1.05
CPNE7-201ENST00000268720 PFKFB3Q16875 520 aaPredicted RBP21.6■■□□□ 1.05
CPNE7-201ENST00000268720 RNF216Q9NWF9 866 aaPredicted RBP21.6■■□□□ 1.05
CPNE7-201ENST00000268720 GDAQ9Y2T3 454 aa21.6■■□□□ 1.05
CPNE7-201ENST00000268720 CCDC88AQ3V6T2 1871 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 TRIM49BA6NDI0 452 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 GOLGA8HP0CJ92 632 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 CASP14P31944 242 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 TBX2Q13207 712 aaPredicted RBP21.59■■□□□ 1.05
CPNE7-201ENST00000268720 IGSF22Q8N9C0 903 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 PNMA1Q8ND90 353 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 CCDC12Q8WUD4 166 aaPredicted RBP21.59■■□□□ 1.05
CPNE7-201ENST00000268720 UIMC1Q96RL1 719 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 SYNRGQ9UMZ2 1314 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 ZSCAN12O43309 604 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 SPTY2D1Q68D10 685 aaPredicted RBP21.59■■□□□ 1.05
CPNE7-201ENST00000268720 TYW1BQ6NUM6 668 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 TRERF1Q96PN7 1200 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 MTRQ99707 1265 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 KAT14Q9H8E8 782 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 TAB2Q9NYJ8 693 aa21.59■■□□□ 1.05
CPNE7-201ENST00000268720 LAMB1P07942 1786 aa21.58■■□□□ 1.05
CPNE7-201ENST00000268720 CASQ1P31415 396 aa21.58■■□□□ 1.05
CPNE7-201ENST00000268720 ATP2C1P98194 919 aaPredicted RBP21.58■■□□□ 1.05
CPNE7-201ENST00000268720 DHX8Q14562 1220 aaKnown RBP21.58■■□□□ 1.05
CPNE7-201ENST00000268720 SLC35G1Q2M3R5 365 aa21.58■■□□□ 1.05
CPNE7-201ENST00000268720 KANK3Q6NY19 840 aa21.58■■□□□ 1.05
CPNE7-201ENST00000268720 ENOX1Q8TC92 643 aaKnown RBP21.58■■□□□ 1.05
CPNE7-201ENST00000268720 SAP30BPQ9UHR5 308 aaKnown RBP21.58■■□□□ 1.05
CPNE7-201ENST00000268720 FAM205AQ6ZU69 1335 aa21.58■■□□□ 1.05
CPNE7-201ENST00000268720 FXR1P51114 621 aaKnown RBP eCLIP21.58■■□□□ 1.04
CPNE7-201ENST00000268720 PRR5LQ6MZQ0 368 aa21.58■■□□□ 1.04
CPNE7-201ENST00000268720 TMCO3Q6UWJ1 677 aa21.58■■□□□ 1.04
CPNE7-201ENST00000268720 SH3RF1Q7Z6J0 888 aa21.58■■□□□ 1.04
CPNE7-201ENST00000268720 MAPKAPK5Q8IW41 473 aa21.58■■□□□ 1.04
CPNE7-201ENST00000268720 WDR66Q8TBY9 1149 aa21.58■■□□□ 1.04
CPNE7-201ENST00000268720 FERMT2Q96AC1 680 aa21.57■■□□□ 1.04
CPNE7-201ENST00000268720 NOL10Q9BSC4 688 aaKnown RBP21.57■■□□□ 1.04
CPNE7-201ENST00000268720 XDHP47989 1333 aa21.57■■□□□ 1.04
CPNE7-201ENST00000268720 TRIML1Q8N9V2 468 aa21.57■■□□□ 1.04
CPNE7-201ENST00000268720 HINFPQ9BQA5 517 aa21.57■■□□□ 1.04
CPNE7-201ENST00000268720 MKNK2Q9HBH9 465 aa21.57■■□□□ 1.04
CPNE7-201ENST00000268720 LEMD3Q9Y2U8 911 aa21.57■■□□□ 1.04
CPNE7-201ENST00000268720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.56■■□□□ 1.04
CPNE7-201ENST00000268720 GPSM2P81274 684 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms