RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 CAPNS2Q96L46 248 aa17.73■□□□□ 0.43
COPS3-201ENST00000268717 USP28Q96RU2 1077 aa17.73■□□□□ 0.43
COPS3-201ENST00000268717 STX8Q9UNK0 236 aa17.73■□□□□ 0.43
COPS3-201ENST00000268717 CLRN2A0PK11 232 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 GOLGA6L4A6NEF3 574 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 KIF28PB7ZC32 967 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 SMARCA1P28370 1054 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 ECE1P42892 770 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 SRBD1Q8N5C6 995 aaKnown RBP17.72■□□□□ 0.43
COPS3-201ENST00000268717 KCNG4Q8TDN1 519 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 CEP95Q96GE4 821 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.72■□□□□ 0.43
COPS3-201ENST00000268717 MTMR4Q9NYA4 1195 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 TMOD2Q9NZR1 351 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 MYH15Q9Y2K3 1946 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 PALM3A6NDB9 673 aaPredicted RBP17.72■□□□□ 0.43
COPS3-201ENST00000268717 FKBP1BP68106 108 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 ZFPM1Q8IX07 1006 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 DEFB129Q9H1M3 183 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 GJB4Q9NTQ9 266 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 MAD2L2Q9UI95 211 aa17.72■□□□□ 0.43
COPS3-201ENST00000268717 GNL2Q13823 731 aaKnown RBP17.71■□□□□ 0.43
COPS3-201ENST00000268717 SPDYE2Q495Y8 402 aa17.71■□□□□ 0.43
COPS3-201ENST00000268717 NOSTRINQ8IVI9 506 aa17.71■□□□□ 0.43
COPS3-201ENST00000268717 VEZTQ9HBM0 779 aa17.71■□□□□ 0.43
COPS3-201ENST00000268717 PPP2R3BQ9Y5P8 575 aa17.71■□□□□ 0.43
COPS3-201ENST00000268717 V9GY48 417 aaPredicted RBP17.71■□□□□ 0.43
COPS3-201ENST00000268717 AKR1B1P15121 316 aa17.7■□□□□ 0.42
COPS3-201ENST00000268717 CACNB3P54284 484 aa17.7■□□□□ 0.42
COPS3-201ENST00000268717 GRM1Q13255 1194 aa17.7■□□□□ 0.42
COPS3-201ENST00000268717 PFKFB3Q16875 520 aaPredicted RBP17.7■□□□□ 0.42
COPS3-201ENST00000268717 TATDN1Q6P1N9 297 aa17.7■□□□□ 0.42
COPS3-201ENST00000268717 DIS3L2Q8IYB7 885 aaKnown RBP17.7■□□□□ 0.42
COPS3-201ENST00000268717 CMTR1Q8N1G2 835 aaKnown RBP17.7■□□□□ 0.42
COPS3-201ENST00000268717 CCDC82Q8N4S0 544 aa17.7■□□□□ 0.42
COPS3-201ENST00000268717 LINC00301Q8NCQ3 95 aa17.7■□□□□ 0.42
COPS3-201ENST00000268717 PHF20Q9BVI0 1012 aa17.7■□□□□ 0.42
COPS3-201ENST00000268717 SPZ1Q9BXG8 430 aa17.7■□□□□ 0.42
COPS3-201ENST00000268717 TDRD3Q9H7E2 651 aaKnown RBP17.7■□□□□ 0.42
COPS3-201ENST00000268717 SH3GLB2Q9NR46 395 aa17.7■□□□□ 0.42
COPS3-201ENST00000268717 ZNF70Q9UC06 446 aaPredicted RBP17.7■□□□□ 0.42
COPS3-201ENST00000268717 TTLL1O95922 423 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 HSPA1AP0DMV8 641 aaKnown RBP17.69■□□□□ 0.42
COPS3-201ENST00000268717 HSPA1BP0DMV9 641 aaKnown RBP17.69■□□□□ 0.42
COPS3-201ENST00000268717 SCG2P13521 617 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 MRE11P49959 708 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 SH3BP5LQ7L8J4 393 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 PGBD1Q96JS3 809 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 DNAJC18Q9H819 358 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 MORC2Q9Y6X9 1032 aaPredicted RBP17.69■□□□□ 0.42
COPS3-201ENST00000268717 GREB1LQ9C091 1923 aaPredicted RBP17.69■□□□□ 0.42
COPS3-201ENST00000268717 DDTLA6NHG4 134 aaPredicted RBP17.69■□□□□ 0.42
COPS3-201ENST00000268717 UBE2Q2LH0YL09 131 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 SNHG28P0DPA3 235 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 NF2P35240 595 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 ANO1Q5XXA6 986 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 RGMBQ6NW40 437 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 LRSAM1Q6UWE0 723 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 BRMS1Q9HCU9 246 aa17.69■□□□□ 0.42
COPS3-201ENST00000268717 DDX19AQ9NUU7 478 aaKnown RBP17.69■□□□□ 0.42
COPS3-201ENST00000268717 SIPA1L1O43166 1804 aa17.68■□□□□ 0.42
COPS3-201ENST00000268717 MYH8P13535 1937 aa17.68■□□□□ 0.42
COPS3-201ENST00000268717 A0A1W2PQ27 194 aa17.68■□□□□ 0.42
COPS3-201ENST00000268717 A0A1W2PQ64 194 aa17.68■□□□□ 0.42
COPS3-201ENST00000268717 A0A1W2PQD8 194 aa17.68■□□□□ 0.42
COPS3-201ENST00000268717 PARP1P09874 1014 aaKnown RBP17.68■□□□□ 0.42
COPS3-201ENST00000268717 TNFAIP1Q13829 316 aa17.68■□□□□ 0.42
COPS3-201ENST00000268717 RILPL1Q5EBL4 403 aa17.68■□□□□ 0.42
COPS3-201ENST00000268717 FAM151AQ8WW52 585 aa17.68■□□□□ 0.42
COPS3-201ENST00000268717 TRIM34Q9BYJ4 488 aa17.68■□□□□ 0.42
COPS3-201ENST00000268717 HERC5Q9UII4 1024 aaKnown RBP17.68■□□□□ 0.42
COPS3-201ENST00000268717 AOC2O75106 756 aa17.67■□□□□ 0.42
COPS3-201ENST00000268717 MAP2K2P36507 400 aa17.67■□□□□ 0.42
COPS3-201ENST00000268717 TCP10Q12799 353 aa17.67■□□□□ 0.42
COPS3-201ENST00000268717 RASA3Q14644 834 aa17.67■□□□□ 0.42
COPS3-201ENST00000268717 SLC39A14Q15043 492 aa17.67■□□□□ 0.42
COPS3-201ENST00000268717 STK38Q15208 465 aa17.67■□□□□ 0.42
COPS3-201ENST00000268717 ASPRV1Q53RT3 343 aa17.67■□□□□ 0.42
COPS3-201ENST00000268717 MOB2Q70IA6 237 aa17.67■□□□□ 0.42
COPS3-201ENST00000268717 FAM83AQ86UY5 434 aa17.67■□□□□ 0.42
COPS3-201ENST00000268717 FTOQ9C0B1 505 aaKnown RBP eCLIP17.67■□□□□ 0.42
COPS3-201ENST00000268717 SSC5DA1L4H1 1573 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 MYH6P13533 1939 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 BTBD18B2RXH4 712 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 SPTLC2O15270 562 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 PPP6R2O75170 966 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 CALML3P27482 149 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 KRT2P35908 639 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 ADALQ6DHV7 355 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 ZSCAN29Q8IWY8 852 aaPredicted RBP17.66■□□□□ 0.42
COPS3-201ENST00000268717 STAG2Q8N3U4 1231 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 BICD2Q8TD16 824 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 MKL1Q969V6 931 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 WBP1LQ9NX94 342 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 VPS54Q9P1Q0 977 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 SYNPO2Q9UMS6 1093 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 KCNJ14Q9UNX9 436 aa17.66■□□□□ 0.42
COPS3-201ENST00000268717 FAM155AB1AL88 458 aaPredicted RBP17.65■□□□□ 0.42
COPS3-201ENST00000268717 hCG_1984214I3L0E3 225 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 SLURP2P0DP57 97 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms