RNA–Protein interactions for RNA: ENST00000261597.8

NDC80-201, Transcript of NDC80, kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC80, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-201ENST00000261597 MCTP1Q6DN14 999 aa7.79□□□□□ -1.16
NDC80-201ENST00000261597 TMEM179Q6ZVK1 233 aa7.79□□□□□ -1.16
NDC80-201ENST00000261597 MKL1Q969V6 931 aa7.79□□□□□ -1.16
NDC80-201ENST00000261597 NYAP2Q9P242 653 aa7.79□□□□□ -1.16
NDC80-201ENST00000261597 RBM27Q9P2N5 1060 aaKnown RBP7.79□□□□□ -1.16
NDC80-201ENST00000261597 GREB1LQ9C091 1923 aaPredicted RBP7.79□□□□□ -1.16
NDC80-201ENST00000261597 PALM3A6NDB9 673 aaPredicted RBP7.78□□□□□ -1.16
NDC80-201ENST00000261597 FAM196BA6NMK8 535 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 GRIN3BO60391 1043 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 PLEKHA8P1O95397 391 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 EGFRP00533 1210 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 PRKAR2AP13861 404 aaKnown RBP7.78□□□□□ -1.16
NDC80-201ENST00000261597 SMARCA1P28370 1054 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 RESTQ13127 1097 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 TRIM29Q14134 588 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 RASA3Q14644 834 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 GPR162Q16538 588 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 C9orf131Q5VYM1 1079 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 SRBD1Q8N5C6 995 aaKnown RBP7.78□□□□□ -1.16
NDC80-201ENST00000261597 TMUB1Q9BVT8 246 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 TMEM106CQ9BVX2 250 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 TMEM39BQ9GZU3 492 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 CABP5Q9NP86 173 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 CLIP2Q9UDT6 1046 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 MAD2L2Q9UI95 211 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 HACL1Q9UJ83 578 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 V9GY48 417 aaPredicted RBP7.78□□□□□ -1.16
NDC80-201ENST00000261597 PARP1P09874 1014 aaKnown RBP7.78□□□□□ -1.16
NDC80-201ENST00000261597 SLURP2P0DP57 97 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 SKOR2Q2VWA4 1001 aaPredicted RBP7.78□□□□□ -1.16
NDC80-201ENST00000261597 KRT40Q6A162 431 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 DPY19L2Q6NUT2 758 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 FERMT3Q86UX7 667 aa7.78□□□□□ -1.16
NDC80-201ENST00000261597 APOBEC3FQ8IUX4 373 aaKnown RBP7.78□□□□□ -1.16
NDC80-201ENST00000261597 CMTR1Q8N1G2 835 aaKnown RBP7.78□□□□□ -1.16
NDC80-201ENST00000261597 CCDC97Q96F63 343 aaPredicted RBP7.78□□□□□ -1.16
NDC80-201ENST00000261597 DDNO94850 711 aaPredicted RBP7.77□□□□□ -1.17
NDC80-201ENST00000261597 SNHG28P0DPA3 235 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 MYH6P13533 1939 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 XBP1P17861 261 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 LMOD1P29536 600 aaPredicted RBP7.77□□□□□ -1.17
NDC80-201ENST00000261597 GUCY1A2P33402 732 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 EPS15P42566 896 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 FOSBP53539 338 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 GUCY1B3Q02153 619 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 SEPT2Q15019 361 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 PKN1Q16512 942 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 CSPP1Q1MSJ5 1256 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 ATL3Q6DD88 541 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 STAG2Q8N3U4 1231 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 CNTNAP5Q8WYK1 1306 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 HOOK2Q96ED9 719 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 TEPSINQ96N21 525 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 AIFM3Q96NN9 605 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 LMBRD1Q9NUN5 540 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 SYNPO2Q9UMS6 1093 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 TCHHQ07283 1943 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 ZC3H4Q9UPT8 1303 aaKnown RBP7.77□□□□□ -1.17
NDC80-201ENST00000261597 USP17L5A8MUK1 530 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 KLRF2D3W0D1 207 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 GDF11O95390 407 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 PDHBP11177 359 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 EEF2P13639 858 aaKnown RBP7.77□□□□□ -1.17
NDC80-201ENST00000261597 KRT85P78386 507 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 DNM1Q05193 864 aaKnown RBP7.77□□□□□ -1.17
NDC80-201ENST00000261597 RRP1BQ14684 758 aaKnown RBP7.77□□□□□ -1.17
NDC80-201ENST00000261597 FOXD4L6Q3SYB3 417 aaPredicted RBP7.77□□□□□ -1.17
NDC80-201ENST00000261597 ASPRV1Q53RT3 343 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 OTUD7BQ6GQQ9 843 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 FOXD4L3Q6VB84 417 aaPredicted RBP7.77□□□□□ -1.17
NDC80-201ENST00000261597 BRAPQ7Z569 592 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 TMEM87AQ8NBN3 555 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 SPZ1Q9BXG8 430 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 DEFB129Q9H1M3 183 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 PLSCR2Q9NRY7 297 aa7.77□□□□□ -1.17
NDC80-201ENST00000261597 ADARB2Q9NS39 739 aaKnown RBP7.77□□□□□ -1.17
NDC80-201ENST00000261597 PITPNM2Q9BZ72 1349 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 MYH4Q9Y623 1939 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 PRPF40AO75400 957 aaKnown RBP7.76□□□□□ -1.17
NDC80-201ENST00000261597 GH2P01242 217 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 U2AF2P26368 475 aaKnown RBP eCLIP7.76□□□□□ -1.17
NDC80-201ENST00000261597 CAP2P40123 477 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 ATP2B2Q01814 1243 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 ICA1Q05084 483 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 SAFBQ15424 915 aaKnown RBP eCLIP7.76□□□□□ -1.17
NDC80-201ENST00000261597 SKIV2LQ15477 1246 aaKnown RBP7.76□□□□□ -1.17
NDC80-201ENST00000261597 PFKFB3Q16875 520 aaPredicted RBP7.76□□□□□ -1.17
NDC80-201ENST00000261597 GPATCH4Q5T3I0 446 aaKnown RBP7.76□□□□□ -1.17
NDC80-201ENST00000261597 ANGEL2Q5VTE6 544 aaKnown RBP7.76□□□□□ -1.17
NDC80-201ENST00000261597 USP17L2Q6R6M4 530 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 MIGA2Q7L4E1 593 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 CLEC10AQ8IUN9 316 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 SIAH1Q8IUQ4 282 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 CDAN1Q8IWY9 1227 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 RETREG2Q8NC44 543 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 TRPM4Q8TD43 1214 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 CHAMP1Q96JM3 812 aa7.76□□□□□ -1.17
NDC80-201ENST00000261597 ZNF396Q96N95 335 aaPredicted RBP7.76□□□□□ -1.17
NDC80-201ENST00000261597 SCAND2PQ9GZW5 306 aaPredicted RBP7.76□□□□□ -1.17
NDC80-201ENST00000261597 GJB4Q9NTQ9 266 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms