RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SART1O43290 800 aaKnown RBP14.49□□□□□ -0.09
PCDHGA3-201ENST00000253812 TBC1D8O95759 1140 aa14.49□□□□□ -0.09
PCDHGA3-201ENST00000253812 BATF3Q9NR55 127 aa14.49□□□□□ -0.09
PCDHGA3-201ENST00000253812 BTG4Q9NY30 223 aa14.49□□□□□ -0.09
PCDHGA3-201ENST00000253812 ANGPTL2Q9UKU9 493 aa14.49□□□□□ -0.09
PCDHGA3-201ENST00000253812 AMFRQ9UKV5 643 aa14.49□□□□□ -0.09
PCDHGA3-201ENST00000253812 GIPC1O14908 333 aa14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 TRAF1Q13077 416 aa14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 ALS2CLQ60I27 953 aa14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 TTC16Q8NEE8 873 aa14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 PDZD8Q8NEN9 1154 aa14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 ZNF219Q9P2Y4 722 aaPredicted RBP14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 RTL9Q8NET4 1388 aa14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 RNF123Q5XPI4 1314 aa14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 NAPAP54920 295 aa14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 SFMBT2Q5VUG0 894 aa14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 NBPF6Q5VWK0 638 aa14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 NBPF4Q96M43 638 aa14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 CABP5Q9NP86 173 aa14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 MORC2Q9Y6X9 1032 aaPredicted RBP14.48□□□□□ -0.09
PCDHGA3-201ENST00000253812 C6orf229H3BNL8 230 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 LDHCP07864 332 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 RFC4P35249 363 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 ADALQ6DHV7 355 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 SLF2Q8IX21 1173 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 CHL1O00533 1208 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 KCNK3O14649 394 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 LMNAP02545 664 aaKnown RBP14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 TRMT1LQ7Z2T5 733 aaKnown RBP14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 SIRT1Q96EB6 747 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 MRPL46Q9H2W6 279 aaKnown RBP14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 MAPK8IP1Q9UQF2 711 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 UGGT1Q9NYU2 1555 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 RBM6P78332 1123 aaKnown RBP14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 NNTQ13423 1086 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 TYW1BQ6NUM6 668 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 GABPB2Q8TAK5 448 aaPredicted RBP14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 SNX14Q9Y5W7 946 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 NR1D1P20393 614 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 FAM133BQ5BKY9 247 aaKnown RBP14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 CDC37L1Q7L3B6 337 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 CHST3Q7LGC8 479 aa14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 NBPF5PQ86XG9 351 aaPredicted RBP14.47□□□□□ -0.09
PCDHGA3-201ENST00000253812 MAN1A2O60476 641 aa14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 INPP1P49441 399 aa14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 TBC1D1Q86TI0 1168 aaPredicted RBP14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 C2CD5Q86YS7 1000 aa14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 RRP36Q96EU6 259 aaKnown RBP14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 OSBPL9Q96SU4 736 aa14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 TYW1Q9NV66 732 aaKnown RBP14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 EPN1Q9Y6I3 576 aaPredicted RBP14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 ZBTB7BO15156 539 aaPredicted RBP14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 GNA11P29992 359 aa14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 NRBP1Q9UHY1 535 aa14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 FRMD4BQ9Y2L6 1034 aa14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 ERCC6L2Q5T890 1561 aa14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 DEUP1Q05D60 604 aa14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 TRMT44Q8IYL2 757 aaKnown RBP14.46□□□□□ -0.09
PCDHGA3-201ENST00000253812 RASSF10A6NK89 507 aa14.46□□□□□ -0.1
PCDHGA3-201ENST00000253812 PHBP35232 272 aa14.46□□□□□ -0.1
PCDHGA3-201ENST00000253812 MRPS9P82933 396 aaKnown RBP14.46□□□□□ -0.1
PCDHGA3-201ENST00000253812 LIN9Q5TKA1 542 aa14.46□□□□□ -0.1
PCDHGA3-201ENST00000253812 KRT80Q6KB66 452 aa14.46□□□□□ -0.1
PCDHGA3-201ENST00000253812 SLC35F6Q8N357 371 aa14.46□□□□□ -0.1
PCDHGA3-201ENST00000253812 METP08581 1390 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 BAG3O95817 575 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 ZNF790Q6PG37 636 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 SLC30A9Q6PML9 568 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 SDCCAG3Q96C92 435 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 ATICP31939 592 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 PSMD7P51665 324 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 LMNB2Q03252 620 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 RRAGAQ7L523 313 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 SRLQ86TD4 932 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 CRNKL1Q9BZJ0 848 aaKnown RBP14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 DPH5Q9H2P9 285 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 STOML1Q9UBI4 398 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 IQSEC3Q9UPP2 1182 aaPredicted RBP14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 NIP7Q9Y221 180 aaKnown RBP eCLIP14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 NR1I2O75469 434 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 CHGBP05060 677 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 SOS1Q07889 1333 aaPredicted RBP14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 EEF1DP29692 281 aaKnown RBP14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 ELF1P32519 619 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 TRIML2Q8N7C3 387 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 NRBF2Q96F24 287 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 PLIN2Q99541 437 aa14.45□□□□□ -0.1
PCDHGA3-201ENST00000253812 CHD1O14646 1710 aa14.44□□□□□ -0.1
PCDHGA3-201ENST00000253812 THAP12O43422 761 aa14.44□□□□□ -0.1
PCDHGA3-201ENST00000253812 TRPA1O75762 1119 aa14.44□□□□□ -0.1
PCDHGA3-201ENST00000253812 DZIP3Q86Y13 1208 aaKnown RBP14.44□□□□□ -0.1
PCDHGA3-201ENST00000253812 HELBQ8NG08 1087 aaPredicted RBP14.44□□□□□ -0.1
PCDHGA3-201ENST00000253812 IL15P40933 162 aaPredicted RBP14.44□□□□□ -0.1
PCDHGA3-201ENST00000253812 DNM2P50570 870 aa14.44□□□□□ -0.1
PCDHGA3-201ENST00000253812 MYO1EQ12965 1108 aa14.44□□□□□ -0.1
PCDHGA3-201ENST00000253812 NELFBQ8WX92 580 aa14.44□□□□□ -0.1
PCDHGA3-201ENST00000253812 GFM2Q969S9 779 aaKnown RBP14.44□□□□□ -0.1
PCDHGA3-201ENST00000253812 RIC8AQ9NPQ8 531 aa14.44□□□□□ -0.1
PCDHGA3-201ENST00000253812 PAG1Q9NWQ8 432 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms