RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 DEXIO95424 95 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 PDIA4P13667 645 aaKnown RBP13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 SEC23AQ15436 765 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 FAM177A1Q8N128 213 aaPredicted RBP13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 SYT17Q9BSW7 474 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 MYOZ2Q9NPC6 264 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 SEC63Q9UGP8 760 aaKnown RBP13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 KLRF2D3W0D1 207 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 DGKHQ86XP1 1220 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 GPKOWQ92917 476 aaPredicted RBP eCLIP13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 RBM28Q9NW13 759 aaKnown RBP13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 FAM198AQ9UFP1 575 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 BTBD18B2RXH4 712 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 GH2P01242 217 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 IFNAR1P17181 557 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 PTPN21Q16825 1174 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 ABCB5Q2M3G0 1257 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 ISM2Q6H9L7 571 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 DIS3L2Q8IYB7 885 aaKnown RBP13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 KIF18AQ8NI77 898 aa13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 SCAND2PQ9GZW5 306 aaPredicted RBP13.38□□□□□ -0.27
TNFAIP1-201ENST00000226225 MARCKSP29966 332 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 TNNI2P48788 182 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 HDLBPQ00341 1268 aaKnown RBP13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 SEPT2Q15019 361 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 FBXO38Q6PIJ6 1188 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 SLC16A2P36021 539 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 TROAPQ12815 778 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 SHROOM1Q2M3G4 852 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 C11orf57Q6ZUT1 292 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 KRT222Q8N1A0 295 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 NEDD1Q8NHV4 660 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 MYH13Q9UKX3 1938 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 WNT10BO00744 389 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 TOP1P11387 765 aaKnown RBP13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 ICA1Q05084 483 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 RASA3Q14644 834 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 KCTD1Q719H9 257 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 SWAP70Q9UH65 585 aa13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 DDX41Q9UJV9 622 aaKnown RBP13.37□□□□□ -0.27
TNFAIP1-201ENST00000226225 SLFN14P0C7P3 912 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 LMOD1P29536 600 aaPredicted RBP13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 CCDC84Q86UT8 332 aaPredicted RBP13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 FAM217BQ9NTX9 383 aaPredicted RBP13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 TMEM51Q9NW97 253 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 USP17L5A8MUK1 530 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 DDAH1O94760 285 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 EGFRP00533 1210 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 SLC1A4P43007 532 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 EVCP57679 992 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 FOXP4Q8IVH2 680 aaPredicted RBP13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 TUBGCP6Q96RT7 1819 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 FMNL1O95466 1100 aaPredicted RBP13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 TTLL1O95922 423 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 GNAQP50148 359 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 NR5A1Q13285 461 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 ERCC6LQ2NKX8 1250 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 SRBD1Q8N5C6 995 aaKnown RBP13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 LEO1Q8WVC0 666 aaPredicted RBP13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 USP28Q96RU2 1077 aa13.36□□□□□ -0.27
TNFAIP1-201ENST00000226225 BIN1O00499 593 aa13.35□□□□□ -0.27
TNFAIP1-201ENST00000226225 DDNO94850 711 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP1-201ENST00000226225 CDAN1Q8IWY9 1227 aa13.35□□□□□ -0.27
TNFAIP1-201ENST00000226225 SMC2O95347 1197 aa13.35□□□□□ -0.27
TNFAIP1-201ENST00000226225 LMNB1P20700 586 aa13.35□□□□□ -0.27
TNFAIP1-201ENST00000226225 RCSD1Q6JBY9 416 aa13.35□□□□□ -0.27
TNFAIP1-201ENST00000226225 LRRN4CLQ8ND94 238 aa13.35□□□□□ -0.27
TNFAIP1-201ENST00000226225 CCDC17Q96LX7 622 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 MTMR4Q9NYA4 1195 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 PAXBP1Q9Y5B6 917 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 EEF2P13639 858 aaKnown RBP13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 NAPAP54920 295 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 PDE4CQ08493 712 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 TERF2Q15554 542 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 ZRSR1Q15695 479 aaKnown RBP13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 KIF4BQ2VIQ3 1234 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 TMTC3Q6ZXV5 915 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 NBPF11Q86T75 865 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 LRRC8AQ8IWT6 810 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 FBXL16Q8N461 479 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 PGBD1Q96JS3 809 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 ANKRD31Q8N7Z5 1873 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 SHMT1P34896 483 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 TNFAIP1Q13829 316 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 TTLL12Q14166 644 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 PPP2R5BQ15173 497 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 NTRK3Q16288 839 aa13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 EAPPQ56P03 285 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP1-201ENST00000226225 BAZ2AQ9UIF9 1905 aaKnown RBP13.33□□□□□ -0.27
TNFAIP1-201ENST00000226225 RESTQ13127 1097 aa13.33□□□□□ -0.27
TNFAIP1-201ENST00000226225 SYT10Q6XYQ8 523 aa13.33□□□□□ -0.27
TNFAIP1-201ENST00000226225 RRP36Q96EU6 259 aaKnown RBP13.33□□□□□ -0.27
TNFAIP1-201ENST00000226225 NUP88Q99567 741 aaPredicted RBP13.33□□□□□ -0.27
TNFAIP1-201ENST00000226225 MTA3Q9BTC8 594 aa13.33□□□□□ -0.27
TNFAIP1-201ENST00000226225 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.33□□□□□ -0.27
TNFAIP1-201ENST00000226225 ASTN2O75129 1339 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 FKBP1AP62942 108 aaKnown RBP13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 IRX5P78411 483 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms