RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 MCM7P33993 719 aa20.61■□□□□ 0.89
SLC22A4-201ENST00000200652 FMR1Q06787 632 aaKnown RBP eCLIP20.61■□□□□ 0.89
SLC22A4-201ENST00000200652 NEDD1Q8NHV4 660 aa20.61■□□□□ 0.89
SLC22A4-201ENST00000200652 CCDC34Q96HJ3 373 aa20.61■□□□□ 0.89
SLC22A4-201ENST00000200652 USP27XA6NNY8 438 aa20.61■□□□□ 0.89
SLC22A4-201ENST00000200652 TNNT1P13805 278 aa20.61■□□□□ 0.89
SLC22A4-201ENST00000200652 AFMP43652 599 aa20.61■□□□□ 0.89
SLC22A4-201ENST00000200652 GTF2IP78347 998 aa20.61■□□□□ 0.89
SLC22A4-201ENST00000200652 ATP6V0A2Q9Y487 856 aa20.61■□□□□ 0.89
SLC22A4-201ENST00000200652 FOCADQ5VW36 1801 aa20.61■□□□□ 0.89
SLC22A4-201ENST00000200652 M0R2N6 131 aa20.6■□□□□ 0.89
SLC22A4-201ENST00000200652 RIMBP2O15034 1052 aa20.6■□□□□ 0.89
SLC22A4-201ENST00000200652 RBM10P98175 930 aaKnown RBP20.6■□□□□ 0.89
SLC22A4-201ENST00000200652 IL17AQ16552 155 aa20.6■□□□□ 0.89
SLC22A4-201ENST00000200652 WWC2Q6AWC2 1192 aa20.6■□□□□ 0.89
SLC22A4-201ENST00000200652 ENOX1Q8TC92 643 aaKnown RBP20.6■□□□□ 0.89
SLC22A4-201ENST00000200652 DHX8Q14562 1220 aaKnown RBP20.59■□□□□ 0.89
SLC22A4-201ENST00000200652 CFAP100Q494V2 611 aa20.59■□□□□ 0.89
SLC22A4-201ENST00000200652 DAGLAQ9Y4D2 1042 aa20.59■□□□□ 0.89
SLC22A4-201ENST00000200652 RIOK3O14730 519 aaKnown RBP20.59■□□□□ 0.89
SLC22A4-201ENST00000200652 C4orf32Q8N8J7 132 aa20.59■□□□□ 0.89
SLC22A4-201ENST00000200652 RASGRP4Q8TDF6 673 aa20.59■□□□□ 0.89
SLC22A4-201ENST00000200652 MED15Q96RN5 788 aa20.59■□□□□ 0.89
SLC22A4-201ENST00000200652 LZTS2Q9BRK4 669 aa20.59■□□□□ 0.89
SLC22A4-201ENST00000200652 KCND1Q9NSA2 647 aa20.59■□□□□ 0.89
SLC22A4-201ENST00000200652 GOLGA8HP0CJ92 632 aa20.58■□□□□ 0.89
SLC22A4-201ENST00000200652 SFPQP23246 707 aaKnown RBP eCLIP20.58■□□□□ 0.89
SLC22A4-201ENST00000200652 COA1Q9GZY4 146 aa20.58■□□□□ 0.89
SLC22A4-201ENST00000200652 BARHL2Q9NY43 387 aa20.58■□□□□ 0.89
SLC22A4-201ENST00000200652 NFE2L3Q9Y4A8 694 aa20.58■□□□□ 0.89
SLC22A4-201ENST00000200652 KLRF2D3W0D1 207 aa20.58■□□□□ 0.88
SLC22A4-201ENST00000200652 STXBP3O00186 592 aa20.58■□□□□ 0.88
SLC22A4-201ENST00000200652 ZNF18P17022 549 aa20.58■□□□□ 0.88
SLC22A4-201ENST00000200652 CASP1P29466 404 aa20.58■□□□□ 0.88
SLC22A4-201ENST00000200652 DPYDQ12882 1025 aa20.58■□□□□ 0.88
SLC22A4-201ENST00000200652 RASGRP2Q7LDG7 609 aa20.58■□□□□ 0.88
SLC22A4-201ENST00000200652 HEATR3Q7Z4Q2 680 aa20.58■□□□□ 0.88
SLC22A4-201ENST00000200652 DAGLBQ8NCG7 672 aa20.58■□□□□ 0.88
SLC22A4-201ENST00000200652 CCDC148Q8NFR7 591 aa20.58■□□□□ 0.88
SLC22A4-201ENST00000200652 PCDHA6Q9UN73 950 aa20.58■□□□□ 0.88
SLC22A4-201ENST00000200652 PCDHA8Q9Y5H6 950 aa20.58■□□□□ 0.88
SLC22A4-201ENST00000200652 RRP9O43818 475 aaKnown RBP20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 E2F4Q16254 413 aa20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 ARL6IP4Q66PJ3 421 aaKnown RBP20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 VSTM4Q8IW00 320 aa20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 TRMT44Q8IYL2 757 aaKnown RBP20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 CCAR2Q8N163 923 aaKnown RBP20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 NRXN2Q9P2S2 1712 aa20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 TMEM232C9JQI7 657 aa20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 SRGNP10124 158 aa20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 HMGB2P26583 209 aaKnown RBP20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 ERCC5P28715 1186 aaPredicted RBP20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 HSP90AA4PQ58FG1 418 aa20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 GALNT17Q6IS24 598 aa20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 CEP95Q96GE4 821 aa20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 SPZ1Q9BXG8 430 aa20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 INTS13Q9NVM9 706 aa20.57■□□□□ 0.88
SLC22A4-201ENST00000200652 CCDC194A0A1B0GVG4 234 aa20.56■□□□□ 0.88
SLC22A4-201ENST00000200652 HSP90AA2PQ14568 343 aaPredicted RBP20.56■□□□□ 0.88
SLC22A4-201ENST00000200652 NYAP1Q6ZVC0 841 aa20.56■□□□□ 0.88
SLC22A4-201ENST00000200652 COL23A1Q86Y22 540 aaPredicted RBP20.56■□□□□ 0.88
SLC22A4-201ENST00000200652 NLGN1Q8N2Q7 840 aa20.56■□□□□ 0.88
SLC22A4-201ENST00000200652 IQUBQ8NA54 791 aa20.56■□□□□ 0.88
SLC22A4-201ENST00000200652 TSC1Q92574 1164 aa20.56■□□□□ 0.88
SLC22A4-201ENST00000200652 GSDMAQ96QA5 445 aa20.56■□□□□ 0.88
SLC22A4-201ENST00000200652 CPVLQ9H3G5 476 aa20.56■□□□□ 0.88
SLC22A4-201ENST00000200652 TRMT1Q9NXH9 659 aaKnown RBP20.56■□□□□ 0.88
SLC22A4-201ENST00000200652 PARP1P09874 1014 aaKnown RBP20.55■□□□□ 0.88
SLC22A4-201ENST00000200652 TOP1P11387 765 aaKnown RBP20.55■□□□□ 0.88
SLC22A4-201ENST00000200652 NOVP48745 357 aa20.55■□□□□ 0.88
SLC22A4-201ENST00000200652 CT47A1Q5JQC4 288 aaPredicted RBP20.55■□□□□ 0.88
SLC22A4-201ENST00000200652 SUGT1Q9Y2Z0 365 aa20.55■□□□□ 0.88
SLC22A4-201ENST00000200652 USP17L2Q6R6M4 530 aa20.55■□□□□ 0.88
SLC22A4-201ENST00000200652 CERS5Q8N5B7 392 aa20.55■□□□□ 0.88
SLC22A4-201ENST00000200652 ZC3H12CQ9C0D7 883 aaKnown RBP20.55■□□□□ 0.88
SLC22A4-201ENST00000200652 F8W031 263 aaPredicted RBP20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 NPR1P16066 1061 aa20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 CD44P16070 742 aaKnown RBP20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 CDK11BP21127 795 aaKnown RBP20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 LONP1P36776 959 aaKnown RBP20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 E4F1Q66K89 784 aaPredicted RBP20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 PDXDC2PQ6P474 469 aa20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 FAM177A1Q8N128 213 aaPredicted RBP20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 STAMQ92783 540 aa20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 AKT1S1Q96B36 256 aa20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 PYM1Q9BRP8 204 aaKnown RBP20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 SAMSN1Q9NSI8 373 aaKnown RBP20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 QSER1Q2KHR3 1735 aa20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 PICALMQ13492 652 aa20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 PTPN14Q15678 1187 aa20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 PTPN21Q16825 1174 aa20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 CEP135Q66GS9 1140 aa20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 PAXBP1Q9Y5B6 917 aa20.54■□□□□ 0.88
SLC22A4-201ENST00000200652 KCNJ6P48051 423 aa20.53■□□□□ 0.88
SLC22A4-201ENST00000200652 CUL4BQ13620 913 aa20.53■□□□□ 0.88
SLC22A4-201ENST00000200652 INF2Q27J81 1249 aa20.53■□□□□ 0.88
SLC22A4-201ENST00000200652 GABPAQ06546 454 aa20.53■□□□□ 0.88
SLC22A4-201ENST00000200652 MTRQ99707 1265 aa20.53■□□□□ 0.88
SLC22A4-201ENST00000200652 ZMYND12Q9H0C1 365 aa20.53■□□□□ 0.88
SLC22A4-201ENST00000200652 NRDCO43847 1150 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms