RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Dhx37Q6NZL1 1150 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Cacna2d2Q6PHS9 1154 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Efcab14Q8BGQ6 484 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Arhgef6Q8K4I3 771 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 GlyctkQ8QZY2 523 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 HmcesQ8R1M0 353 aaKnown RBP12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Q922C1 641 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Krtap5-3Q9D226 196 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Znf521Q6KAS7 1311 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Zbtb7aO88939 569 aaKnown RBP12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 RpsaP14206 295 aaKnown RBP12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 XpcP51612 930 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Spata18Q0P557 537 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Fam83bQ0VBM2 1012 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Haus6Q6NV99 933 aaKnown RBP12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Tmco5aQ9D9D5 303 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Large1Q9Z1M7 756 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Psma7Q9Z2U0 248 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Sox5P35710 763 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Psmc4P54775 418 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Fam207aP58468 219 aaKnown RBP12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Hps5P59438 1126 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 SlmapQ3URD3 845 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 RgmbQ7TQ33 436 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Micall1Q8BGT6 870 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 SyncQ9EPM5 470 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Speer2E9Q9U2 264 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Map3k7clP58500 142 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Stmn4P63042 189 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Proser2Q8C5R2 471 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Lin9Q8C735 542 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Mfap3Q922T2 349 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tpd52l2Q9CYZ2 220 aaKnown RBP12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Zfp408H7BX78 710 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Mei1Q9D4I2 1268 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Abt1Q9QYL7 269 aaKnown RBP12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Ttc41Q692V3 1318 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Serpinb6eI7HJI3 429 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Hpcal4Q8BGZ1 191 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Armcx3Q8BHS6 379 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Zbtb1Q91VL9 713 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Emilin1Q99K41 1017 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 EcsitQ9QZH6 435 aa12.89□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Cbfa2t2O70374 594 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Camk4P08414 469 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Usp53P15975 1069 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Atp8a1P70704 1164 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Kctd19Q562E2 927 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Ccdc92bQ5SUE3 299 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 LgsnQ8CIX8 563 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Gimap7Q8R379 293 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Dhx58Q99J87 678 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 AceP09470 1312 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Mdh1P14152 334 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Prl3d1P18121 224 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 IvlP48997 467 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tubb2aQ7TMM9 445 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tubb2bQ9CWF2 445 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Mis18aQ9CZJ6 204 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Krt20Q9D312 431 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Myl7Q9QVP4 175 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 CebpaP53566 359 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Atp1b3P97370 278 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 F13a1Q8BH61 732 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Snx1Q9WV80 522 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Usp42B2RQC2 1324 aaKnown RBP12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Col17a1Q07563 1470 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Armc3A2AU72 881 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Atf5O70191 283 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Ctnnd1P30999 938 aaKnown RBP12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Akr1b8P45377 316 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Cct6bQ61390 531 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Znf219Q6IQX8 726 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Bola2Q8BGS2 86 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Bst2Q8R2Q8 172 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Usp33Q8R5K2 909 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Creb3l3Q91XE9 479 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Calml3Q9D6P8 149 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Ccdc124Q9D8X2 217 aaKnown RBP12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Azi2Q9QYP6 405 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Plcb1Q9Z1B3 1216 aa12.88□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Ubn2Q80WC1 1314 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 AW822073A0A0N4SUK1 652 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Ccdc170D3YXL0 722 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 NppbP40753 121 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Nsun2Q1HFZ0 757 aaKnown RBP12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 AsphQ8BSY0 741 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Ccdc28aQ8CEI3 192 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Slc26a7Q8R2Z3 656 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 JmyQ9QXM1 983 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Ankrd2Q9WV06 328 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Mtus1Q5HZI1 1210 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 NfkbibQ60778 359 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Vps52Q8C754 723 aaKnown RBP12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Slc35f6Q8VE96 372 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Krt7Q9DCV7 457 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Gdf11Q9Z1W4 405 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Pard3Q99NH2 1333 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Uhmk1P97343 419 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Nlrp1aQ2LKU9 1182 aa12.87□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms