RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Ppp2r3dQ9Z176 491 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Zfyve9A2A8R0 1397 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Epb41l2O70318 988 aaKnown RBP12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Tmem165P52875 323 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Plekhf1Q3TB82 279 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ckap2Q3V1H1 664 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Foxd1Q61345 456 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Secisbp2lQ6A098 1086 aaKnown RBP12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Nme8Q715T0 586 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Clec4gQ8BNX1 294 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Slc39a11Q8BWY7 342 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Krt23Q99PS0 422 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Col11a2Q64739 1736 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Speer4dL7N216 212 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Gm4340L7N2C4 268 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Enc1O35709 589 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Cnnm2Q3TWN3 875 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 VmacQ8BP01 174 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Q8C1R3 189 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Rtn1Q8K0T0 780 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 MeiocA2AG06 965 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ugt1a8D3Z748 530 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ugt1a10E9PXN7 530 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Phldb3E9QAF4 648 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Impdh2P24547 514 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Pth1rP41593 591 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Olfr119Q7TRJ5 321 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Hps6Q8BLY7 805 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Phldb2Q8K1N2 1249 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Rrp1bQ91YK2 724 aaKnown RBP12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Srgap2Q91Z67 1071 aa12.1□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ubr3Q5U430 1889 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Acad12D3Z7X0 555 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Slc4a4O88343 1079 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Nub1P54729 614 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Rps6kc1Q8BLK9 1056 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Caps2Q8BUG5 550 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ano2Q8CFW1 1002 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Cnpy3Q9DAU1 276 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 WtapQ9ER69 396 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Lgr5Q9Z1P4 907 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Golgb1E9PVZ8 3238 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Trim30cD3YVI9 513 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Pola2P33611 600 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Snrpa1P57784 255 aaKnown RBP12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Chp1P61022 195 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Usp27Q8CEG8 438 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 NapgQ9CWZ7 312 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Mfap3lQ9D3X9 409 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Klhl10Q9D5V2 608 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Lztfl1Q9JHQ5 299 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Abcd1P48410 736 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 1810065E05RikQ5NC41 235 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Cyp4x1Q6A152 507 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Cfap69Q8BH53 942 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Anks1bQ8BIZ1 1259 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Kif2bQ8C0N1 668 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Apol10aQ8CCA5 318 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Nod2Q8K3Z0 1020 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ctage5Q8R311 779 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Card14Q99KF0 999 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Cfap45Q9D9U9 551 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Rcan1Q9JHG6 198 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Stk39Q9Z1W9 556 aa12.09□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Krt24A1L317 512 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Zfand4D3Z3C6 739 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Znf496Q5SXI5 585 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Dnph1Q80VJ3 173 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Pold4Q9CWP8 107 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Mageb16Q9CWV4 363 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Egfl6Q9JJZ5 550 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Gm5580A0A0N4SVP8 411 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Kifc2O08672 792 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cd3dP04235 173 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Klra1P20937 262 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Inf2Q0GNC1 1273 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 RragbQ6NTA4 374 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cep85Q8BMK0 761 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Lrrd1Q8C0R9 853 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Ufl1Q8CCJ3 793 aaKnown RBP12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Krt222Q8CCX5 294 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Fam217aQ9D9W6 419 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 AmfrQ9R049 643 aa12.08□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Tbc1d8bA3KGB4 1114 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Zscan20B2KFW1 1030 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Zbtb7aO88939 569 aaKnown RBP12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Nkx2-5P42582 318 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Nat1P50294 290 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cct5P80316 541 aaKnown RBP12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cct6aP80317 531 aaKnown RBP12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Fam89aQ14BJ1 175 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 HrQ61645 1182 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Tspyl4Q8VD63 406 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Txndc5Q91W90 417 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Ferd3lQ923Z4 168 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 FliiQ9JJ28 1271 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Dennd3A2RT67 1274 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Gm21969J3QJZ1 289 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 PparaP23204 468 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Wnt7aP24383 349 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms