RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Il4rP16382 810 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Rapgef5Q8C0Q9 814 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Psma7Q9Z2U0 248 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Baz2bA2AUY4 2123 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ccdc155Q80VJ8 648 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Clec11aO88200 328 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Spc24Q9D083 201 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Bpifb4A2BGH0 617 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Gpc4P51655 557 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Dab2ipQ3UHC7 1189 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Gbp11A9YVJ5 442 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Gm4758L7N258 96 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Olfm4Q3UZZ4 505 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ncoa7Q6DFV7 943 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Fchsd1Q6PFY1 688 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Stambpl1Q76N33 436 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Cracr2bQ80ZJ8 394 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Tbc1d23Q8K0F1 684 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 AmotQ8VHG2 1126 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Pde3aQ9Z0X4 1141 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ppp4r1Q8K2V1 951 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Rtn3Q9ES97 964 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Hsdl2Q2TPA8 490 aaKnown RBP20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Pde5aQ8CG03 865 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 HnrnprQ8VHM5 632 aaKnown RBP20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 MthfsQ9D110 203 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Gm14819Q62478 212 aa20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 Eef1gQ9D8N0 437 aaKnown RBP20.04■□□□□ 0.8
Trim71-201ENSMUST00000111816 HpdP49429 393 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Tpp2Q64514 1262 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Kif1bpQ6ZPU9 617 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Polr2dQ9D7M8 142 aaKnown RBP20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Kcnh3Q9WVJ0 1095 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 NfkbiaQ9Z1E3 314 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Nek1P51954 1203 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Arl13bQ640N2 427 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ccdc82Q6PG04 518 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Fam47cQ14BE7 430 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Zyg11aA2BFL2 627 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Trim5E9PV98 497 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Nuak1Q641K5 658 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 CenpuQ8C4M7 410 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Myl7Q9QVP4 175 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Nr1d1Q3UV55 615 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ap1b1O35643 943 aaKnown RBP20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Tmem232Q5K6N0 675 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Arhgap29Q8CGF1 1266 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ankrd26Q811D2 1581 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Cfap70D3YVL2 1141 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Gas2l2Q5SSG4 860 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Tekt3Q6X6Z7 490 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Rdm1Q9CQK3 281 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ddit3P35639 168 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Kiaa1024Q8K3V7 917 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Bloc1s4Q8VED2 215 aa20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 Xpo5Q924C1 1204 aaKnown RBP20.03■□□□□ 0.8
Trim71-201ENSMUST00000111816 TchhA0A0B4J1F9 1599 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Krt36B1AQ75 473 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Pms2P54279 859 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ccdc92bQ5SUE3 299 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Lrrc43Q3V0L5 667 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Fkbp6Q91XW8 327 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 S100a9P31725 113 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Pdha1P35486 390 aaKnown RBP20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Nkx1-2P42580 305 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Zfp781Q0P5U5 243 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ap2b1Q9DBG3 937 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Slc27a3O88561 667 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Mx1P09922 631 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Atf2P16951 487 aaKnown RBP20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Tmem247Q497K7 211 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Dhx38Q80X98 1228 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Gid8Q9D7M1 228 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Cwf19l2Q8BG79 887 aaKnown RBP20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Kif21bQ9QXL1 1668 aa20.02■□□□□ 0.8
Trim71-201ENSMUST00000111816 Rad23aP54726 363 aa20.02■□□□□ 0.79
Trim71-201ENSMUST00000111816 Nhej1Q3KNJ2 295 aa20.02■□□□□ 0.79
Trim71-201ENSMUST00000111816 Lrch2Q3UMG5 773 aa20.02■□□□□ 0.79
Trim71-201ENSMUST00000111816 GptQ8QZR5 496 aa20.02■□□□□ 0.79
Trim71-201ENSMUST00000111816 Znf711A2ANX9 761 aa20.02■□□□□ 0.79
Trim71-201ENSMUST00000111816 Cnbd1B1AWM0 430 aa20.02■□□□□ 0.79
Trim71-201ENSMUST00000111816 Fgfr1op2Q9CRA9 253 aa20.02■□□□□ 0.79
Trim71-201ENSMUST00000111816 Dydc2Q9D3X8 139 aa20.02■□□□□ 0.79
Trim71-201ENSMUST00000111816 Gspt2Q149F3 632 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Tlk1Q8C0V0 766 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Echdc1Q9D9V3 322 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Abcc4E9Q236 1325 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Akr1b10G5E895 316 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Parp1P11103 1013 aaKnown RBP20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Ero1aQ8R180 464 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Sestd1Q80UK0 696 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Serpinb12Q9D7P9 423 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Cd274Q9EP73 290 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Psma3O70435 255 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Top2aQ01320 1528 aaKnown RBP20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 ThrspQ62264 150 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Trpa1Q8BLA8 1125 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 XpcP51612 930 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Usp6nlQ80XC3 819 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 CinpQ9D0V8 212 aa20.01■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms