RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Rhpn1Q61085 643 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Phc1Q64028 1012 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ccdc43Q9CR29 222 aaKnown RBP8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ccdc182Q9D9C6 152 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Camta1A2A891 1682 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Gm28042B7ZCM9 1014 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Maml3D4QGC2 1135 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Parp2O88554 559 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Pak1O88643 545 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 RpsaP14206 295 aaKnown RBP8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Sstr3P30935 428 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Sap30bpQ02614 308 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 EnahQ03173 802 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Skap2Q3UND0 358 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Irf9Q61179 399 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Utp14bQ6EJB6 756 aaKnown RBP8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Haus7Q8BKT8 364 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 E330017A01RikQ8BU47 192 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Itga2bQ9QUM0 1033 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Uts2Q9QZQ3 123 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Pnpla7A2AJ88 1352 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Snapc4Q8BP86 1333 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Chmp6P0C0A3 200 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Asic3Q6X1Y6 530 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Mb21d2Q8C525 428 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Lmbrd2Q8C561 694 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 4930504O13RikQ8C5Z9 145 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Gtpbp10Q8K013 366 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 HibchQ8QZS1 385 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Stap2Q8R0L1 411 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Trim29Q8R2Q0 587 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ctage5Q8R311 779 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Gm28360A0A087WR25 190 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Zfp275G3X904 499 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Sec24cG3X972 1096 aaKnown RBP8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Scgb2b19J3QM75 112 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Klc1O88447 541 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Rps6ka3P18654 740 aaKnown RBP8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 ClgnP52194 611 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 GnpatP98192 678 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 RalgdsQ03385 852 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Dnajc8Q6NZB0 253 aaKnown RBP8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Vps53Q8CCB4 832 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Exd1Q8CDF7 570 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 N4bp2F8VQG7 1678 aaKnown RBP8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Slit2Q9R1B9 1521 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Fbf1A2A870 1173 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Taf4bG5E8Z2 855 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ncf2O70145 525 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Hspd1P63038 573 aaKnown RBP8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Olfr121Q5CZY0 321 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Kctd16Q5DTY9 427 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Sun3Q5SS91 320 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 HellsQ60848 821 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Xlr3bQ6P205 226 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ahcyl1Q80SW1 530 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ccdc14Q8K2J4 934 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 NptxrQ99J85 493 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Pik3c2aQ61194 1686 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Sall1Q9ER74 1322 aa8.3□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Cyb5rlB1AS42 316 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Cyp2d11P24457 504 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Chp1P61022 195 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 GmncQ3URY2 333 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Prpf38aQ4FK66 312 aaKnown RBP8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 GpkowQ56A08 488 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Tab3Q571K4 716 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Cep131Q62036 1060 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 DbnlQ62418 436 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Suds3Q8BR65 328 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 CntrobQ8CB62 887 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Znf445Q8R2V3 986 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Kcnh5Q920E3 988 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Bzw1Q9CQC6 419 aaKnown RBP8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Thap2Q9D305 217 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Psma7Q9Z2U0 248 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Col16a1Q8BLX7 1580 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Sik3Q6P4S6 1311 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Scgb2b11A0A087WR49 112 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ccdc170D3YXL0 722 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Zfand4D3Z3C6 739 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Atp2a2O55143 1044 aaKnown RBP8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Pbx1P41778 430 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Arhgef1Q61210 920 aaKnown RBP8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Q8C5C9 218 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ssh3Q8K330 649 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Golga1Q9CW79 758 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 3830403N18RikQ9D6C3 208 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Xrcc6P23475 608 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Casp4P70343 373 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Arl13bQ640N2 427 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Rad17Q6NXW6 688 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 AmphQ7TQF7 686 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Wdr35Q8BND3 1181 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Pcdha5Q91Y15 934 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Apopt1Q9CQW7 192 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ddx47Q9CWX9 455 aaKnown RBP8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Serpinb6cW4VSP4 379 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Trpm3Q5F4S9 1721 aa8.29□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Scgb2b7D3YYY1 112 aa8.29□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms