RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Znf394Q9Z1D9 521 aa12.4□□□□□ -0.42
Col20a1-201ENSMUST00000108856 Tex13c2A0A0G2JGA3 530 aa12.4□□□□□ -0.42
Col20a1-201ENSMUST00000108856 Chmp6P0C0A3 200 aa12.4□□□□□ -0.42
Col20a1-201ENSMUST00000108856 Ccpg1Q640L3 753 aa12.4□□□□□ -0.42
Col20a1-201ENSMUST00000108856 Krt39Q6IFX4 482 aa12.4□□□□□ -0.42
Col20a1-201ENSMUST00000108856 Ppp2r5bQ6PD28 497 aa12.4□□□□□ -0.42
Col20a1-201ENSMUST00000108856 FktnQ8R507 461 aa12.4□□□□□ -0.42
Col20a1-201ENSMUST00000108856 Kdm8Q9CXT6 414 aa12.4□□□□□ -0.42
Col20a1-201ENSMUST00000108856 Gm4340L7N2C4 268 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Foxp1P58462 705 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Exoc3Q6KAR6 755 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Oxsr1Q6P9R2 527 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Herc4Q6PAV2 1057 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Apol10aQ8CCA5 318 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Sulf1Q8K007 870 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Nxf1Q99JX7 618 aaKnown RBP12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Kiaa0232Q80U59 1396 aaKnown RBP12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Adamtsl3G3UXC7 1706 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Trpm3Q5F4S9 1721 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 VimP20152 466 aaKnown RBP12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Cetn1P41209 172 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Evi5P97366 809 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Spata21Q8BHW6 681 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Arid5bQ8BM75 1188 aaKnown RBP12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 ClasrpQ8CFC7 668 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 BbxQ8VBW5 907 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Ccnt1Q9QWV9 724 aaKnown RBP12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Suclg2Q9Z2I8 433 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Rsph10bE9PYQ0 876 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Pde11aP0C1Q2 933 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Prpf38aQ4FK66 312 aaKnown RBP12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Tmtc2Q56A06 836 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Tmx4Q8C0L0 335 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Gle1Q8R322 699 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Hps3Q91VB4 1002 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Nfat5Q9WV30 1534 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Nrxn3Q6P9K9 1571 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Atp6v0a2P15920 856 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Ctdnep1Q3TP92 244 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 C87499Q3UX49 493 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 ErmnQ5EBJ4 281 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 4921504E06RikQ8CET2 560 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Ccne2Q9Z238 404 aa12.39□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Tagap1P0CAX8 505 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Q3UJP5 209 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Fgfr1opQ66JX5 399 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Mtss1lQ6P9S0 715 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Cplx4Q80WM3 160 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 HhatQ8BMT9 499 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Six6os1Q9CTN5 574 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Mtfr1lQ9CWE0 289 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Ahnak2E9PYB0 1738 aaKnown RBP12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Dnajc21E9Q8D0 531 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 MmeQ61391 750 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Tbc1d31Q6NXY1 996 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Cep19Q9CQA8 163 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 PdclQ9DBX2 301 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Bpifb4A2BGH0 617 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Znf667Q2TL60 609 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Tsga10Q6NY15 697 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Ireb2Q811J3 963 aaKnown RBP12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Ccdc113Q8C5T8 377 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Adgrb1Q3UHD1 1582 aa12.38□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Ifi207E9Q3L4 978 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Opa1P58281 960 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 1700013D24RikQ0P521 120 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Ccdc157Q5SPX1 718 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Stxbp3Q60770 592 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Zfp91Q62511 572 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Haus6Q6NV99 933 aaKnown RBP12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Depdc1bQ8BH88 529 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Pcdha12Q91Y18 950 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Cabp7Q91ZM8 215 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Arfgap2Q99K28 520 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 LdhaP06151 332 aaKnown RBP12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Tdo2P48776 406 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Dact3Q0PHV7 610 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Tex35Q14BK3 207 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 P4ha1Q60715 534 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Hook2Q7TMK6 716 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Rexo1Q7TT28 1213 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Ndufab1Q9CR21 156 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Azi2Q9QYP6 405 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Als2Q920R0 1651 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Clrn2B2RVW2 232 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Cetn3O35648 167 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Slc4a1P04919 929 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Madcam1Q61826 405 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Dnm3Q8BZ98 863 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Pcdha7Q91Y13 937 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Ubn2Q80WC1 1314 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Vmn2r68L7N2B3 851 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 MycP01108 439 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Cyp19a1P28649 503 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Sept1P42209 366 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Rpl13P47963 211 aaKnown RBP12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Sestd1Q80UK0 696 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Ankrd13aQ80UP5 588 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 RragaQ80X95 313 aa12.37□□□□□ -0.43
Col20a1-201ENSMUST00000108856 Hgh1Q8C3I8 393 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms