RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Klhl41A2AUC9 606 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Terf1P70371 421 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Nucb2P81117 420 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Znf667Q2TL60 609 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Tmed1Q3V009 227 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Rc3h1Q4VGL6 1130 aaKnown RBP12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Glg1Q61543 1175 aaKnown RBP12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Lrrc15Q80X72 579 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Csrnp2Q8BGQ2 534 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Clic6Q8BHB9 596 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Matr3Q8K310 846 aaKnown RBP12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Tlcd1Q99JT6 247 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Trmt44Q9D2Q2 713 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Chd5A2A8L1 1946 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Vars2Q3U2A8 1060 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Naif1Q6PFD7 327 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Cand2Q6ZQ73 1235 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Epha10Q8BYG9 1007 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Tbc1d23Q8K0F1 684 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Unc45aQ99KD5 944 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Grin2dQ03391 1323 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Plekhg2Q6KAU7 1340 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Sycp2lA0A0M3U1B0 842 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 PparaP23204 468 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Bend4P86174 541 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Fam198bQ3UPI1 517 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Klra8Q60682 266 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Nod2Q8K3Z0 1020 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Kri1Q8VDQ9 704 aaKnown RBP12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Krt23Q99PS0 422 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ctnnbl1Q9CWL8 563 aaKnown RBP12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Q9D1Z2 194 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Xpo4Q9ESJ0 1151 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Gtf2iQ9ESZ8 998 aaKnown RBP12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Clip2Q9Z0H8 1047 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Zmym2Q9CU65 1376 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Gm43738A0A0G2JEA5 862 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Lcmt1A0A0U1RNF2 332 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ttc30a2A2AKQ8 664 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ppef2O35385 757 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 RadxQ8C779 850 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ttc30a1Q99J38 664 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 HibadhQ99L13 335 aaKnown RBP12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ttc30bQ9CY00 664 aa12.81□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Dock5B2RY04 1868 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ccdc88aQ5SNZ0 1873 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Znf609Q8BZ47 1413 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Trim55G3X8Y1 545 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ptgs1P22437 602 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 VrtnQ3SYK4 740 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 LrmpQ60664 539 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Hif1aQ61221 836 aaKnown RBP12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Lrrd1Q8C0R9 853 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ssh3Q8K330 649 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 ParnQ8VDG3 624 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Tubgcp2Q921G8 905 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Cdc27A2A6Q5 825 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Dnajc25A2ALW5 357 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Il7P10168 154 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Chrna5Q2MKA5 467 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Mars2Q499X9 586 aaKnown RBP12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Tmtc2Q56A06 836 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Usp13Q5BKP2 858 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Cep85Q8BMK0 761 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Serpina10Q8R121 448 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Get4Q9D1H7 327 aa12.8□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Gucy1a2F8VQK3 730 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Nfil3O08750 462 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 LtkP08923 888 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 DnttP09838 530 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 OatP29758 439 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Irx1P81068 480 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Jdp2P97875 163 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Mad2l2Q9D752 211 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 RabggtaQ9JHK4 567 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Myo1cQ9WTI7 1063 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Zfp597E9Q6S0 419 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Gas1Q01721 343 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Phactr1Q2M3X8 580 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Gucy2cQ3UWA6 1072 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ncbp1Q3UYV9 790 aaKnown RBP12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Sh3gl3Q62421 347 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Tacc1Q6Y685 774 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Dusp9Q7TNL7 452 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Olfr119Q7TRJ5 321 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Kiaa1524Q8BWY9 907 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Magi2Q9WVQ1 1275 aa12.79□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Epb41l2O70318 988 aaKnown RBP12.78□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Grem2O88273 168 aa12.78□□□□□ -0.36
Ddx55-201ENSMUST00000071057 MarcksP26645 309 aaKnown RBP12.78□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Usp5P56399 858 aaKnown RBP12.78□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ppp4cP97470 307 aa12.78□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Gja5Q01231 358 aa12.78□□□□□ -0.36
Ddx55-201ENSMUST00000071057 AsnsQ61024 561 aa12.78□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Gga3Q8BMI3 718 aa12.78□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Synpo2Q91YE8 1087 aaKnown RBP12.78□□□□□ -0.36
Ddx55-201ENSMUST00000071057 UvssaQ9D479 717 aa12.78□□□□□ -0.36
Ddx55-201ENSMUST00000071057 A0A0U1RNP2 1173 aa12.78□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Pfkfb3A7UAK5 555 aa12.78□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Scg2Q03517 617 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms