RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Mapk4Q6P5G0 583 aa26.21■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Phf20Q8BLG0 1010 aaKnown RBP26.21■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Inpp4aQ9EPW0 939 aa26.21■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Gm5114W4VSN8 858 aa26.21■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Pagr1bF6V0H0 108 aa26.2■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Fgl2P12804 432 aa26.2■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Nom1Q3UFM5 854 aaKnown RBP26.2■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Akap4Q60662 849 aa26.2■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Nup88Q8CEC0 753 aaKnown RBP26.2■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Wdr24Q8CFJ9 790 aa26.2■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Onecut3Q8K557 490 aa26.2■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Pagr1aQ99L02 253 aa26.2■■□□□ 1.78
Upf3a-201ENSMUST00000043767 CsadQ9DBE0 493 aa26.2■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Hip1rQ9JKY5 1068 aa26.2■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Gm28047Q3US59 414 aa26.19■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Ms4a5Q810P8 197 aa26.19■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Arhgef6Q8K4I3 771 aa26.19■■□□□ 1.78
Upf3a-201ENSMUST00000043767 NenfQ9CQ45 171 aa26.19■■□□□ 1.78
Upf3a-201ENSMUST00000043767 B3galt4Q9Z0F0 371 aa26.19■■□□□ 1.78
Upf3a-201ENSMUST00000043767 SynrgQ5SV85 1306 aa26.19■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Myh7bA2AQP0 1941 aa26.19■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Zfp953Q3UPV7 304 aa26.19■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Kctd3Q8BFX3 815 aa26.19■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Srek1Q8BZX4 494 aaKnown RBP26.19■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Cry2Q9R194 592 aa26.19■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Pabpc1lA2A5N3 607 aaKnown RBP26.18■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Wdr78E9PYY5 807 aa26.18■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Larp6Q8BN59 492 aa26.18■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Rps6ka5Q8C050 863 aa26.18■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Q8K2W9 541 aa26.18■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Sgip1Q8VD37 806 aa26.18■■□□□ 1.78
Upf3a-201ENSMUST00000043767 XdhQ00519 1335 aa26.18■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Scfd2Q8BTY8 684 aa26.18■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Gjb4Q02738 266 aa26.17■■□□□ 1.78
Upf3a-201ENSMUST00000043767 BC048507Q80ZS7 89 aa26.17■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Kiaa1524Q8BWY9 907 aa26.17■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Riox2Q8CD15 465 aa26.17■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Col4a3bpQ9EQG9 624 aa26.17■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Pramel3A2AHA7 463 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Gm7903A2AWL1 463 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 AV320801A2AWL3 467 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Gm15023L7MUB4 467 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 MthfslL7N466 203 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Kif3aP28741 701 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 PRAG1Q571I4 1179 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Samm50Q8BGH2 469 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Ccer1Q9CQL2 403 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Ccdc162pQ0VG85 912 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Armc6Q8BNU0 468 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Gpcpd1Q8C0L9 675 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Tmod2Q9JKK7 351 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 PdcQ9QW08 244 aa26.16■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Polr2aP08775 1970 aaKnown RBP26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Ccdc112A0AUP1 442 aa26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Mx1P09922 631 aa26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Wnt7aP24383 349 aa26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Mmp20P57748 482 aa26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Adcy5P84309 1262 aa26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Rhpn1Q61085 643 aa26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Swap70Q6A028 585 aaKnown RBP26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 C8aQ8K182 587 aa26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Ddx20Q9JJY4 825 aaKnown RBP26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Adgrg6Q6F3F9 1165 aa26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Atp1a3Q6PIC6 1013 aa26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Stk38Q91VJ4 465 aa26.15■■□□□ 1.78
Upf3a-201ENSMUST00000043767 Snap25P60879 206 aa26.14■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Tspyl4Q8VD63 406 aa26.14■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Apobec3Q99J72 440 aaKnown RBP26.14■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Sel1lQ9Z2G6 790 aa26.14■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Gm45140A0A0N4SUM8 220 aa26.13■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Dhx8A2A4P0 1244 aaKnown RBP26.13■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Prkg1P0C605 671 aa26.13■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Gdf10P97737 476 aa26.13■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Oxr1Q4KMM3 866 aa26.13■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Gmcl1Q920G9 524 aa26.13■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Mx2Q9WVP9 655 aa26.13■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Sez6lQ6P1D5 963 aa26.13■■□□□ 1.77
Upf3a-201ENSMUST00000043767 CrebrfQ8CDG5 640 aaKnown RBP26.13■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Scn10aQ6QIY3 1958 aa26.12■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Gucy1a2F8VQK3 730 aa26.12■■□□□ 1.77
Upf3a-201ENSMUST00000043767 L1camP11627 1260 aa26.12■■□□□ 1.77
Upf3a-201ENSMUST00000043767 PigsQ6PD26 555 aaKnown RBP26.12■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Galnt17Q7TT15 598 aa26.12■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Phldb3E9QAF4 648 aa26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Sptlc2P97363 560 aaKnown RBP26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Zfp341Q6PGC9 846 aa26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Cdan1Q8CC12 1239 aa26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 SltmQ8CH25 1031 aaKnown RBP26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Mrps25Q9D125 171 aaKnown RBP26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 1700113H08RikE9Q9Q5 327 aa26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Tshz1Q5DTH5 1084 aa26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Vmn1r209Q5NC97 312 aa26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Dlg1Q811D0 905 aaKnown RBP26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Bicd2Q921C5 820 aa26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Yeats4Q9CR11 227 aaKnown RBP26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Wdr64Q9D565 1086 aa26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 GdaQ9R111 454 aa26.11■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Palm3A2TJV2 734 aa26.1■■□□□ 1.77
Upf3a-201ENSMUST00000043767 ThbdP15306 577 aa26.1■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Nap1l2P51860 460 aa26.1■■□□□ 1.77
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms