RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Pex3Q9QXY9 372 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Lrrc74aA0A1Y7VMD6 494 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Cyp3a25O09158 503 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Eef2P58252 858 aaKnown RBP11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Skap1Q3UUV5 355 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 SpopQ6ZWS8 374 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Fam228aQ8CDW1 299 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Tbc1d23Q8K0F1 684 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Skor2A7M7C7 1008 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Cyp3a59D3Z2W7 503 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Sval3Q76I99 144 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 HomezQ80W88 542 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Dpp8Q80YA7 892 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Enox2Q8R0Z2 598 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Eaf2Q91ZD6 262 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Nrbp1Q99J45 535 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ifi35Q9D8C4 286 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Pus3Q9JI38 481 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Rps6ka4Q9Z2B9 773 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 LdhbP16125 334 aaKnown RBP11.4□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ric8aQ3TIR3 530 aa11.4□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Krt39Q6IFX4 482 aa11.4□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Lztfl1Q9JHQ5 299 aa11.4□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Tfap4Q9JIZ5 338 aa11.4□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Btn2a2A4QPC6 514 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Sept2P42208 361 aaKnown RBP11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Krt40Q6IFX3 439 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Trim37Q6PCX9 961 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Clic6Q8BHB9 596 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Pus7lQ8CE46 702 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Plcg2Q8CIH5 1265 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Spata2Q8K004 515 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 PpanQ91YU8 470 aaKnown RBP11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Kctd10Q922M3 315 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Abca17E9PX95 1733 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Wdr19Q3UGF1 1341 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Cnbd1B1AWM0 430 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Krt8P11679 490 aaKnown RBP11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Large2Q5XPT3 690 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Cdc23Q8BGZ4 597 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Tmem179Q8BHH9 233 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 ClasrpQ8CFC7 668 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Glrx3Q9CQM9 337 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 4930548H24RikQ9D496 437 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 4931423N10RikQ9D4J9 382 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Tnip1Q9WUU8 647 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 GsdmeQ9Z2D3 512 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Rbm6S4R1W5 1118 aaKnown RBP11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ino80Q6ZPV2 1559 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Brpf3B2KF05 1204 aaKnown RBP11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Zfpm1O35615 995 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Zhx1P70121 873 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Mtus1Q5HZI1 1210 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Panx2Q6IMP4 677 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 4921504E06RikQ8CET2 560 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Card14Q99KF0 999 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 TbcbQ9D1E6 244 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Sorbs3Q9R1Z8 733 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Nfe2l3Q9WTM4 660 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Plcb1Q9Z1B3 1216 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Abca9Q8K449 1623 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 A0A1Y7VML8 143 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Pcdha4O88689 947 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Retreg2Q6NS82 541 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Cfap100Q80VN0 613 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Cplx4Q80WM3 160 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Susd4Q8BH32 490 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Sh2b1Q91ZM2 756 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Hs6st3Q9QYK4 470 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Gdf11Q9Z1W4 405 aa11.39□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Armc3A2AU72 881 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 EgfrQ01279 1210 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Gas7Q60780 421 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Fbxo11Q7TPD1 930 aaKnown RBP11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Kif2bQ8C0N1 668 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Bzw2Q91VK1 419 aaKnown RBP11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Desi2Q9D291 194 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Trmt112Q9DCG9 125 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Tmem191cQ9JJB1 302 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 4932429P05RikA2ADI4 785 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Apol7aB2RT54 418 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Chmp6P0C0A3 200 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Dynll1P63168 89 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 PicalmQ7M6Y3 660 aaKnown RBP11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Calcoco1Q8CGU1 691 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Bbs5Q9CZQ9 341 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Abca8aQ8K442 1620 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Kcnh4A2A5F7 1018 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Sclt1G5E861 688 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Sox13Q04891 613 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Arid3aQ62431 601 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Caps2Q8BUG5 550 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 JmyQ9QXM1 983 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Xrn1P97789 1719 aaKnown RBP11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Fdx1P46656 188 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Nf2P46662 596 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Scg2Q03517 617 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Nhej1Q3KNJ2 295 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ints8Q80V86 995 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Sptlc3Q8BG54 563 aa11.38□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms