RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Bcl11bQ99PV8 884 aa13.49□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Syf2Q9D198 242 aaKnown RBP13.49□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Cdh15P33146 784 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Irak1Q62406 710 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 ParvgQ9ERD8 331 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Ercc4Q9QZD4 917 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 IkbkbO88351 757 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Lrrc4bP0C192 709 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Casp1P29452 402 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 1700013D24RikQ0P521 120 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Trappc10Q3TLI0 1259 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Adam6bQ6IMH7 756 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Aggf1Q7TN31 711 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Rufy1Q8BIJ7 712 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 QarsQ8BML9 775 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Dclk3Q8BWQ5 790 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Sash3Q8K352 380 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Apobec3Q99J72 440 aaKnown RBP13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 ToporslQ9D2F8 683 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Nrxn3Q6P9K9 1571 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Speer4aF8VPX6 267 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Slc12a2P55012 1205 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Eif3j1Q3UGC7 261 aaKnown RBP13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 SfswapQ3USH5 945 aaKnown RBP13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Eif3j2Q66JS6 263 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 GypcQ78HU7 95 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Ppm1eQ80TL0 749 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Myo1hQ9D6A1 958 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 CenphQ9QYM8 241 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Zfp142G5E869 1843 aa13.48□□□□□ -0.25
Rfx1-201ENSMUST00000005600 NpcdF8VQB8 469 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Psmd14O35593 310 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Ppp1r7Q3UM45 361 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Trim6Q8BGE7 488 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Ttc26Q8BS45 554 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 CutaQ9CQ89 177 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Fut8Q9WTS2 575 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Dctn1O08788 1281 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 GabrdP22933 449 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Dynll1P63168 89 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Hook2Q7TMK6 716 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Vipas39Q8BGQ1 491 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 MtrrQ8C1A3 696 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Spice1Q8C804 860 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Stn1Q8K2X3 378 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 E2f4Q8R0K9 410 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 RarsQ9D0I9 660 aaKnown RBP13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Mkrn1Q9QXP6 481 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Ppp1r21Q3TDD9 780 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Ifit1bl2Q3U687 466 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Tmtc2Q56A06 836 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Podxl2Q8CAE9 603 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Tmem63cQ8CBX0 802 aa13.47□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Snx12O70493 165 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Kdm1aQ6ZQ88 853 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Sorbs3Q9R1Z8 733 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Lrp6O88572 1613 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Stat5bP42232 786 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Spata5Q3UMC0 893 aaKnown RBP13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Esco1Q69Z69 843 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Maip1Q8BHE8 291 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 SetQ9EQU5 289 aaKnown RBP13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Mapk8ip1Q9WVI9 707 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 1700017N19RikA0A087WPJ1 469 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Fam186bD3Z420 943 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Serpina16D3Z660 418 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Gucy1a2F8VQK3 730 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Ddx3yQ62095 658 aaKnown RBP13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Rnf187Q8BFX1 236 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Gimap7Q8R379 293 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Scrn1Q9CZC8 414 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Syce1Q9D495 329 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Cxcl11Q9JHH5 100 aa13.46□□□□□ -0.25
Rfx1-201ENSMUST00000005600 Nav1Q8CH77 1875 aa13.46□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ppfia4B8QI36 1187 aa13.46□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Nck2O55033 380 aa13.46□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Cep131Q62036 1060 aa13.46□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Gpbp1Q6NXH3 473 aaKnown RBP13.46□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ccdc181Q80ZU5 509 aa13.46□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Fam193aQ8CGI1 1231 aaKnown RBP13.46□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Matr3Q8K310 846 aaKnown RBP13.46□□□□□ -0.26
Rfx1-201ENSMUST00000005600 SyncQ9EPM5 470 aa13.46□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ubxn8Q9QZ49 277 aa13.46□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Gpaa1Q9WTK3 621 aa13.46□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Irs4Q9Z0Y7 1216 aa13.46□□□□□ -0.26
Rfx1-201ENSMUST00000005600 MeiocA2AG06 965 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Prr5lA2AVJ5 370 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Foxn2E9Q7L6 429 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Asic3Q6X1Y6 530 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Susd4Q8BH32 490 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Bpifb6Q8BU51 449 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Leng8Q8CBY3 785 aaKnown RBP13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Eps8l1Q8R5F8 716 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Washc1Q8VDD8 475 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Tmem39aQ9CYC3 486 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 NgdnQ9DB96 315 aaKnown RBP13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Znf638Q61464 1960 aaKnown RBP13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 1700029H14RikE9PY36 240 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Fkbp1aP26883 108 aaKnown RBP13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 NeblQ0II04 452 aa13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms