RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Gm10134F6ZQC6 126 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Myo1aO88329 1043 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Serpinc1P32261 465 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Sval3Q76I99 144 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Nop53Q8BK35 484 aaKnown RBP14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Cdan1Q8CC12 1239 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Phf20l1Q8CCJ9 1013 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Synpo2Q91YE8 1087 aaKnown RBP14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Dlg5E9Q9R9 1921 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 HgsQ99LI8 775 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Sos2Q02384 1333 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Mx1P09922 631 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Mcm5P49718 733 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Clul1Q3ZRW6 464 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Cyp7b1Q60991 507 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Fchsd1Q6PFY1 688 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Otop3Q80UF9 577 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Naa25Q8BWZ3 972 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Gramd4Q8CB44 633 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Mfap3lQ9D3X9 409 aa14.19□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Usp53P15975 1069 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 HelqQ2VPA6 1069 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Lrrc59Q922Q8 307 aaKnown RBP14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Armc9Q9D2I5 817 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 MycbpQ9EQS3 103 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Pde8bE9Q4S1 865 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Tnnc1P19123 161 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Trip13Q3UA06 432 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Krt15Q61414 452 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Nlrp9bQ66X22 1003 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Anks1bQ8BIZ1 1259 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 ClasrpQ8CFC7 668 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Calml3Q9D6P8 149 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Kcnb2A6H8H5 907 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Chp1P61022 195 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Kifap3P70188 793 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Kiaa1328Q6NZK5 612 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Gimap7Q8R379 293 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Tgs1Q923W1 853 aa14.18□□□□□ -0.14
Clcn3-201ENSMUST00000004430 AW822073A0A0N4SUK1 652 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Dynll1P63168 89 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Ift20Q61025 132 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Bbs9Q811G0 885 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Haus1Q8BHX1 278 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Spata32Q8C5V0 334 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Cabp7Q91ZM8 215 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Cnpy3Q9DAU1 276 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Robo1O89026 1612 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Nrxn3Q6P9K9 1571 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Tcp10bE9PYJ0 438 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Ppfibp2O35711 882 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Dnm2P39054 870 aaKnown RBP14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Fxr1Q61584 677 aaKnown RBP14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Naa35Q6PHQ8 725 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Prdm4Q80V63 803 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Maip1Q8BHE8 291 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Usp27Q8CEG8 438 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Stn1Q8K2X3 378 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Calml4Q91WQ9 153 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Xrcc6P23475 608 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Gm5935Q497S0 212 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Esco1Q69Z69 843 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Cyp4x1Q6A152 507 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Sptlc3Q8BG54 563 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Rassf10Q8BL43 508 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Ccdc89Q9DA73 370 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Gkap1Q9JMB0 366 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Trp53inp1Q9QXE4 239 aa14.17□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Zfp174B9EJW5 407 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Mroh9G5E8L9 891 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Cyp2d10P24456 504 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Specc1Q5SXY1 1067 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Kif1bpQ6ZPU9 617 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Cep85Q8BMK0 761 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Mtmr6Q8VE11 617 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 AdarQ99MU3 1178 aaKnown RBP14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Galnt15Q9D2N8 638 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Nap1l5Q9JJF0 156 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Vnn1Q9Z0K8 512 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Kank3Q9Z1P7 791 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Fam83bQ0VBM2 1012 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Bicd1Q8BR07 835 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Lrrc41Q8K1C9 807 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Med23Q80YQ2 1367 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Nfatc2ipO09130 412 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Gdap1O88741 358 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Slc4a1P04919 929 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 H2afxP27661 143 aaKnown RBP14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Mnat1P51949 309 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Krt86P97861 486 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Ccpg1Q640L3 753 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Gimap8Q75N62 688 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Sh3d21Q7TSG5 549 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Dclk3Q8BWQ5 790 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Spata4Q8K3V1 295 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Usp11Q99K46 921 aa14.16□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Pth1rP41593 591 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Lrrc36Q3V0M2 755 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Clec16aQ80U30 1036 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Rrp1bQ91YK2 724 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms