RNA–Protein interactions for RNA: snR85

snR85, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR85, Length 171 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR85	snR85	MTC4	P38335	694 aa	Known RBP	0.28	□□□□□ -2.36
snR85	snR85	RRP3	P38712	501 aa	Known RBP	0.28	□□□□□ -2.36
snR85	snR85	NDT80	P38830	627 aa		0.28	□□□□□ -2.36
snR85	snR85	SNG1	P46950	547 aa		0.28	□□□□□ -2.36
snR85	snR85	TDA7	P53882	636 aa	Predicted RBP	0.28	□□□□□ -2.36
snR85	snR85	HFI1	Q12060	488 aa		0.28	□□□□□ -2.36
snR85	snR85	YOL098C	Q12496	1037 aa		0.28	□□□□□ -2.36
snR85	snR85	SAL1	D6W196	494 aa		0.27	□□□□□ -2.37
snR85	snR85	PRE2	P30656	287 aa	Known RBP	0.27	□□□□□ -2.37
snR85	snR85	MOT3	P54785	490 aa	Known RBP	0.27	□□□□□ -2.37
snR85	snR85	MAK10	Q02197	733 aa		0.27	□□□□□ -2.37
snR85	snR85	YMR027W	Q04371	470 aa		0.27	□□□□□ -2.37
snR85	snR85	CIA1	Q05583	330 aa		0.27	□□□□□ -2.37
snR85	snR85	SUI3	P09064	285 aa	Known RBP	0.26	□□□□□ -2.37
snR85	snR85	RER1	P25560	188 aa		0.26	□□□□□ -2.37
snR85	snR85	YGL081W	P53156	320 aa		0.26	□□□□□ -2.37
snR85	snR85	MSO1	P53604	210 aa	Known RBP	0.26	□□□□□ -2.37
snR85	snR85	ARK1	P53974	638 aa		0.26	□□□□□ -2.37
snR85	snR85	YHM2	Q04013	314 aa		0.26	□□□□□ -2.37
snR85	snR85	RBA50	Q04418	439 aa		0.26	□□□□□ -2.37
snR85	snR85	YLR001C	Q07895	862 aa		0.26	□□□□□ -2.37
snR85	snR85	MSH2	P25847	964 aa		0.25	□□□□□ -2.37
snR85	snR85	ECM9	Q02202	377 aa		0.25	□□□□□ -2.37
snR85	snR85	NUP100	Q02629	959 aa		0.25	□□□□□ -2.37
snR85	snR85	VPS5	Q92331	675 aa		0.25	□□□□□ -2.37
snR85	snR85	APM4	Q99186	491 aa		0.25	□□□□□ -2.37
snR85	snR85	RPL20A	P0CX23	172 aa	Known RBP	0.24	□□□□□ -2.37
snR85	snR85	RPL20B	P0CX24	172 aa	Predicted RBP	0.24	□□□□□ -2.37
snR85	snR85	RVS161	P25343	265 aa	Known RBP	0.24	□□□□□ -2.37
snR85	snR85	PTR2	P32901	601 aa		0.24	□□□□□ -2.37
snR85	snR85	WSC2	P53832	503 aa		0.24	□□□□□ -2.37
snR85	snR85	DIA1	P54005	336 aa		0.24	□□□□□ -2.37
snR85	snR85	ELP3	Q02908	557 aa	Known RBP	0.24	□□□□□ -2.37
snR85	snR85	NGL1	Q08213	363 aa	Known RBP	0.24	□□□□□ -2.37
snR85	snR85	RPS21A	P0C0V8	87 aa	Known RBP	0.23	□□□□□ -2.37
snR85	snR85	ACH1	P32316	526 aa		0.23	□□□□□ -2.37
snR85	snR85	PAH1	P32567	862 aa		0.23	□□□□□ -2.37
snR85	snR85	YGR153W	P48238	217 aa		0.23	□□□□□ -2.37
snR85	snR85	ERV2	Q12284	196 aa		0.23	□□□□□ -2.37
snR85	snR85	YBR255C-A	Q3E776	120 aa		0.23	□□□□□ -2.37
snR85	snR85	URA3	P03962	267 aa		0.22	□□□□□ -2.37
snR85	snR85	PHO8	P11491	566 aa		0.22	□□□□□ -2.37
snR85	snR85	RPB8	P20436	146 aa		0.22	□□□□□ -2.37
snR85	snR85	PDE1	P22434	369 aa		0.22	□□□□□ -2.37
snR85	snR85	FUN19	P28003	413 aa	Predicted RBP	0.22	□□□□□ -2.37
snR85	snR85	SAC6	P32599	642 aa	Known RBP	0.22	□□□□□ -2.37
snR85	snR85	TIM23	P32897	222 aa		0.22	□□□□□ -2.37
snR85	snR85	CKB2	P38930	258 aa		0.22	□□□□□ -2.37
snR85	snR85	ARB1	P40024	610 aa	Known RBP	0.22	□□□□□ -2.37
snR85	snR85	EMP65	P40085	556 aa		0.22	□□□□□ -2.37
snR85	snR85	CHS6	P40955	746 aa		0.22	□□□□□ -2.37
snR85	snR85	YDL218W	Q07629	317 aa		0.22	□□□□□ -2.37
snR85	snR85	FMP45	Q07651	309 aa		0.22	□□□□□ -2.37
snR85	snR85	BEM2	P39960	2167 aa	Known RBP	0.21	□□□□□ -2.38
snR85	snR85	CHO1	P08456	276 aa		0.21	□□□□□ -2.38
snR85	snR85	STV1	P37296	890 aa		0.21	□□□□□ -2.38
snR85	snR85	VPS64	Q03944	604 aa		0.21	□□□□□ -2.38
snR85	snR85	YDR109C	Q04585	715 aa		0.21	□□□□□ -2.38
snR85	snR85	CDC45	Q08032	650 aa		0.21	□□□□□ -2.38
snR85	snR85	CDC53	Q12018	815 aa	Known RBP	0.21	□□□□□ -2.38
snR85	snR85	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.2	□□□□□ -2.38	not detected
snR85	snR85	MRC1	P25588	1096 aa		0.2	□□□□□ -2.38
snR85	snR85	TUL1	P36096	758 aa		0.2	□□□□□ -2.38
snR85	snR85	RFC1	P38630	861 aa	Known RBP	0.2	□□□□□ -2.38
snR85	snR85	FUN12	P39730	1002 aa	Known RBP	0.2	□□□□□ -2.38
snR85	snR85	MNT2	P53059	558 aa		0.2	□□□□□ -2.38
snR85	snR85	CHK1	P38147	527 aa		0.19	□□□□□ -2.38
snR85	snR85	MGS1	P40151	587 aa		0.19	□□□□□ -2.38
snR85	snR85	MRPL35	Q06678	367 aa		0.19	□□□□□ -2.38
snR85	snR85	TKL1	P23254	680 aa	Known RBP	0.18	□□□□□ -2.38
snR85	snR85	PHM8	P40025	321 aa		0.18	□□□□□ -2.38
snR85	snR85	PTA1	Q01329	785 aa	Predicted RBP	0.18	□□□□□ -2.38
snR85	snR85	MSS11	Q03825	758 aa		0.18	□□□□□ -2.38
snR85	snR85	AAD4	Q07747	329 aa		0.18	□□□□□ -2.38
snR85	snR85	HHF1	P02309	103 aa	Known RBP	0.17	□□□□□ -2.38
snR85	snR85	ARO2	P28777	376 aa	Known RBP	0.17	□□□□□ -2.38
snR85	snR85	PHD1	P36093	366 aa		0.17	□□□□□ -2.38
snR85	snR85	IRC5	P43610	853 aa		0.17	□□□□□ -2.38
snR85	snR85	YJR096W	P47137	282 aa		0.17	□□□□□ -2.38
snR85	snR85	PFA5	Q03289	374 aa		0.17	□□□□□ -2.38
snR85	snR85	PBA1	Q05778	276 aa		0.17	□□□□□ -2.38
snR85	snR85	YOR378W	Q08902	515 aa		0.17	□□□□□ -2.38
snR85	snR85	HOS1	Q12214	470 aa		0.17	□□□□□ -2.38
snR85	snR85	PCT1	P13259	424 aa		0.16	□□□□□ -2.38
snR85	snR85	SIP2	P34164	415 aa	Known RBP	0.16	□□□□□ -2.38
snR85	snR85	SRP68	P38687	599 aa	Known RBP	0.16	□□□□□ -2.38
snR85	snR85	PHO90	P39535	881 aa		0.16	□□□□□ -2.38
snR85	snR85	WTM1	Q12363	437 aa	Known RBP	0.16	□□□□□ -2.38
snR85	snR85	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	0.16	□□□□□ -2.38	not detected
snR85	snR85	STI1	P15705	589 aa	Known RBP RIP-Chip data	0.15	□□□□□ -2.39	not detected
snR85	snR85	ATP12	P22135	325 aa		0.15	□□□□□ -2.39
snR85	snR85	CDC60	P26637	1090 aa	Known RBP	0.15	□□□□□ -2.39
snR85	snR85	PMU1	P36069	295 aa		0.15	□□□□□ -2.39
snR85	snR85	YTA12	P40341	825 aa		0.15	□□□□□ -2.39
snR85	snR85	MSY1	P48527	492 aa		0.15	□□□□□ -2.39
snR85	snR85	YGR079W	P53249	370 aa		0.15	□□□□□ -2.39
snR85	snR85	YNL034W	P53963	612 aa		0.15	□□□□□ -2.39
snR85	snR85	REE1	P40893	198 aa		0.14	□□□□□ -2.39
snR85	snR85	ADE16	P54113	591 aa	Known RBP	0.14	□□□□□ -2.39
snR85	snR85	TRS31	Q03337	283 aa		0.14	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms