RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	RPD3	P32561	433 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	HSL7	P38274	827 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	YHR097C	P38809	366 aa	Known RBP	4.94	□□□□□ -1.62
PXA1	YPL147W	FAA3	P39002	694 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
PXA1	YPL147W	SOP4	P39543	234 aa	Predicted RBP	4.94	□□□□□ -1.62
PXA1	YPL147W	YEL025C	P39991	1188 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	FCY21	P40039	528 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	MMF1	P40185	145 aa	Known RBP	4.94	□□□□□ -1.62
PXA1	YPL147W	FIG4	P42837	879 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	MSE1	P48525	536 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	PRP31	P49704	494 aa	Predicted RBP	4.94	□□□□□ -1.62
PXA1	YPL147W	RTA1	P53047	317 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	RAI1	P53063	387 aa	Known RBP	4.94	□□□□□ -1.62
PXA1	YPL147W	BET4	Q00618	327 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	USA1	Q03714	838 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	SML1	Q04964	104 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	TFC6	Q06339	672 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	FMP25	Q08023	583 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	LEU9	Q12166	604 aa	Known RBP	4.94	□□□□□ -1.62
PXA1	YPL147W	ARP7	Q12406	477 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	RRP12	Q12754	1228 aa	Known RBP	4.94	□□□□□ -1.62
PXA1	YPL147W	YRF1-3	P0CX14	1859 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	YRF1-7	P0CX15	1859 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	YRF1-6	P53819	1859 aa		4.94	□□□□□ -1.62
PXA1	YPL147W	PRP9	P19736	530 aa	Known RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	DBP5	P20449	482 aa	Known RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	ERG3	P32353	365 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	TYE7	P33122	291 aa	Predicted RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	YKR075C	P36155	307 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	AGP2	P38090	596 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	FRT2	P39734	528 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	SIP5	P40210	489 aa	Known RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	RRN7	P40992	514 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	MRPS18	P42847	217 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	PDR16	P53860	351 aa	Known RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	BOP3	P53958	396 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	ROD1	Q02805	837 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	YMR102C	Q03177	834 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	TAF12	Q03761	539 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	PEX12	Q04370	399 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	VPS36	Q06696	566 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	YLR031W	Q07978	186 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	ESA1	Q08649	445 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	OSW2	Q12202	724 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	YPR089W	O13585	888 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	PDE2	P06776	526 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	SRD1	P09007	221 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	KIN3	P22209	435 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	UBA1	P22515	1024 aa	Known RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	GIT1	P25346	518 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	RGD1	P38339	666 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	LTP1	P40347	161 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	YGL204C	P53089	101 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	YGR250C	P53316	781 aa	Known RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	HOS3	Q02959	697 aa	Known RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	YLR297W	Q05899	129 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	YPR147C	Q06522	304 aa	Known RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	PIB1	Q06651	286 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	OMS1	Q06668	471 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	GPI13	Q07830	1017 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	PML1	Q07930	204 aa	Predicted RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	YDL176W	Q12027	708 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	GCN4	P03069	281 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	ADE3	P07245	946 aa	Known RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
PXA1	YPL147W	CLB3	P24870	427 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	CLB4	P24871	460 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	IMG1	P25626	169 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	PAT1	P25644	796 aa	Known RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	YBL010C	P32788	280 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	SSH1	P38353	490 aa	Known RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	MUP3	P38734	546 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	SEN34	P39707	275 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	GDH3	P39708	457 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	OAF1	P39720	1047 aa	Predicted RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	EFM4	P40516	257 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	THI6	P41835	540 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	KRE33	P53914	1056 aa	Known RBP	4.93	□□□□□ -1.62
PXA1	YPL147W	WAR1	Q03631	944 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	DFG5	Q05031	458 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	MCM21	Q06675	368 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	YPR091C	Q06833	770 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	BDS1	Q08347	646 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	YKL068W-A	Q3E826	78 aa		4.93	□□□□□ -1.62
PXA1	YPL147W	VAS1	P07806	1104 aa	Known RBP	4.92	□□□□□ -1.62
PXA1	YPL147W	MSS18	P08593	268 aa		4.92	□□□□□ -1.62
PXA1	YPL147W	GFA1	P14742	717 aa	Known RBP	4.92	□□□□□ -1.62
PXA1	YPL147W	YGL015C	P33199	130 aa		4.92	□□□□□ -1.62
PXA1	YPL147W	STB6	P36085	766 aa		4.92	□□□□□ -1.62
PXA1	YPL147W	UME6	P39001	836 aa		4.92	□□□□□ -1.62
PXA1	YPL147W	SEC72	P39742	193 aa	Known RBP	4.92	□□□□□ -1.62
PXA1	YPL147W	SLM1	P40485	686 aa		4.92	□□□□□ -1.62
PXA1	YPL147W	DPH1	P40487	425 aa	Known RBP	4.92	□□□□□ -1.62
PXA1	YPL147W	ICE2	P40499	491 aa		4.92	□□□□□ -1.62
PXA1	YPL147W	NAS2	P40555	220 aa		4.92	□□□□□ -1.62
PXA1	YPL147W	MVP1	P40959	511 aa	Known RBP	4.92	□□□□□ -1.62
PXA1	YPL147W	FET5	P43561	622 aa		4.92	□□□□□ -1.62
PXA1	YPL147W	RMD8	P43620	662 aa		4.92	□□□□□ -1.62
PXA1	YPL147W	NIT2	P47016	307 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms