RNA–Protein interactions for RNA: YOL027C

MDM38, Transcript of Mitochondrial protein, yeast

Gene MDM38, Length 1,722 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDM38	YOL027C	ACF2	Q12168	779 aa		4.57	□□□□□ -1.68
MDM38	YOL027C	SFI1	Q12369	946 aa		4.57	□□□□□ -1.68
MDM38	YOL027C	RTN2	Q12443	393 aa		4.57	□□□□□ -1.68
MDM38	YOL027C	SRP54	P20424	541 aa	Known RBP	4.56	□□□□□ -1.68
MDM38	YOL027C	RRP43	P25359	394 aa	Predicted RBP	4.56	□□□□□ -1.68
MDM38	YOL027C	PEP3	P27801	918 aa		4.56	□□□□□ -1.68
MDM38	YOL027C	PDB1	P32473	366 aa	Known RBP	4.56	□□□□□ -1.68
MDM38	YOL027C	VMA8	P32610	256 aa	Known RBP	4.56	□□□□□ -1.68
MDM38	YOL027C	MTH1	P35198	433 aa		4.56	□□□□□ -1.68
MDM38	YOL027C	BYE1	P36106	594 aa		4.56	□□□□□ -1.68
MDM38	YOL027C	NTR2	P36118	322 aa	Predicted RBP	4.56	□□□□□ -1.68
MDM38	YOL027C	SRO77	P38163	1010 aa		4.56	□□□□□ -1.68
MDM38	YOL027C	VBA2	P38358	474 aa	Known RBP	4.56	□□□□□ -1.68
MDM38	YOL027C	YNG2	P38806	282 aa	Known RBP	4.56	□□□□□ -1.68
MDM38	YOL027C	DCP2	P53550	970 aa	Known RBP	4.56	□□□□□ -1.68
MDM38	YOL027C	CPR8	P53728	308 aa		4.56	□□□□□ -1.68
MDM38	YOL027C	YDR109C	Q04585	715 aa		4.56	□□□□□ -1.68
MDM38	YOL027C	GFD1	Q04839	188 aa	Known RBP	4.56	□□□□□ -1.68
MDM38	YOL027C	HBT1	Q07653	1046 aa	Known RBP	4.56	□□□□□ -1.68
MDM38	YOL027C	GET3	Q12154	354 aa	Known RBP	4.56	□□□□□ -1.68
MDM38	YOL027C	TPK2	P06245	380 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	SES1	P07284	462 aa	Known RBP	4.55	□□□□□ -1.68
MDM38	YOL027C	BLI1	P35727	113 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	AAP1	P37898	856 aa	Known RBP	4.55	□□□□□ -1.68
MDM38	YOL027C	CHS7	P38843	316 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	CCT6	P39079	546 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	GIP4	P39732	760 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	SAP1	P39955	897 aa	Known RBP	4.55	□□□□□ -1.68
MDM38	YOL027C	YEL057C	P39983	233 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	ADE16	P54113	591 aa	Known RBP	4.55	□□□□□ -1.68
MDM38	YOL027C	WAR1	Q03631	944 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	YML037C	Q03703	340 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	PLM2	Q04383	521 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	YEH1	Q07804	573 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	GRX6	Q12438	231 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	YFL015C	P43578	164 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	YMR155W	Q03795	547 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	HRD3	Q05787	833 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	GRC3	Q07845	632 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	YJR112W-A	Q3E743	109 aa		4.55	□□□□□ -1.68
MDM38	YOL027C	PDX1	P16451	410 aa		4.54	□□□□□ -1.68
MDM38	YOL027C	PWP1	P21304	576 aa	Known RBP	4.54	□□□□□ -1.68
MDM38	YOL027C	KES1	P35844	434 aa	Known RBP	4.54	□□□□□ -1.68
MDM38	YOL027C	SDS3	P40505	327 aa		4.54	□□□□□ -1.68
MDM38	YOL027C	MET28	P40573	187 aa		4.54	□□□□□ -1.68
MDM38	YOL027C	STB4	P50104	949 aa		4.54	□□□□□ -1.68
MDM38	YOL027C	STR3	P53101	465 aa	Known RBP	4.54	□□□□□ -1.68
MDM38	YOL027C	LCL3	P53153	274 aa		4.54	□□□□□ -1.68
MDM38	YOL027C	PSR1	Q07800	427 aa		4.54	□□□□□ -1.68
MDM38	YOL027C	YPT6	Q99260	215 aa		4.54	□□□□□ -1.68
MDM38	YOL027C	RPL7A	P05737	244 aa	Known RBP	4.53	□□□□□ -1.68
MDM38	YOL027C	YJU2	P28320	278 aa	Predicted RBP	4.53	□□□□□ -1.68
MDM38	YOL027C	MRPL9	P31334	269 aa		4.53	□□□□□ -1.68
MDM38	YOL027C	AGP2	P38090	596 aa		4.53	□□□□□ -1.68
MDM38	YOL027C	REG2	P38232	338 aa		4.53	□□□□□ -1.68
MDM38	YOL027C	SEC31	P38968	1273 aa	Known RBP	4.53	□□□□□ -1.68
MDM38	YOL027C	MET18	P40469	1032 aa		4.53	□□□□□ -1.68
MDM38	YOL027C	TDA10	P42938	290 aa		4.53	□□□□□ -1.68
MDM38	YOL027C	RPN11	P43588	306 aa	Known RBP	4.53	□□□□□ -1.68
MDM38	YOL027C	ROK1	P45818	564 aa	Predicted RBP	4.53	□□□□□ -1.68
MDM38	YOL027C	ASN1	P49089	572 aa	Known RBP	4.53	□□□□□ -1.68
MDM38	YOL027C	JJJ1	P53863	590 aa		4.53	□□□□□ -1.68
MDM38	YOL027C	RPL7B	Q12213	244 aa	Known RBP	4.53	□□□□□ -1.68
MDM38	YOL027C	AHA1	Q12449	350 aa	Known RBP	4.53	□□□□□ -1.68
MDM38	YOL027C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
MDM38	YOL027C	PMA2	P19657	947 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	YIH1	P25637	258 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	ORC2	P32833	620 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	YML6	P51998	286 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	YGR066C	P53242	292 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	TIM44	Q01852	431 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	RSM28	Q03430	361 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	SXM1	Q04175	944 aa	Known RBP	4.52	□□□□□ -1.69
MDM38	YOL027C	BUD7	Q08754	746 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	PUS9	Q12069	462 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	ARD1	P07347	238 aa	Predicted RBP	4.52	□□□□□ -1.69
MDM38	YOL027C	PXA2	P34230	853 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	MUP3	P38734	546 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	OPT1	P40897	799 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	CTK2	P46962	323 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	YDR131C	Q03899	556 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	YLR352W	Q06479	807 aa		4.52	□□□□□ -1.69
MDM38	YOL027C	KIN3	P22209	435 aa		4.51	□□□□□ -1.69
MDM38	YOL027C	PEX5	P35056	612 aa		4.51	□□□□□ -1.69
MDM38	YOL027C	MUM2	P38236	366 aa		4.51	□□□□□ -1.69
MDM38	YOL027C	SRP72	P38688	640 aa	Known RBP	4.51	□□□□□ -1.69
MDM38	YOL027C	SMF1	P38925	575 aa		4.51	□□□□□ -1.69
MDM38	YOL027C	ECM10	P39987	644 aa		4.51	□□□□□ -1.69
MDM38	YOL027C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
MDM38	YOL027C	ARG7	Q04728	441 aa		4.51	□□□□□ -1.69
MDM38	YOL027C	CHD1	P32657	1468 aa		4.5	□□□□□ -1.69
MDM38	YOL027C	STE12	P13574	688 aa		4.5	□□□□□ -1.69
MDM38	YOL027C	VMA16	P23968	213 aa		4.5	□□□□□ -1.69
MDM38	YOL027C	DMC1	P25453	334 aa		4.5	□□□□□ -1.69
MDM38	YOL027C	SOF1	P33750	489 aa	Known RBP	4.5	□□□□□ -1.69
MDM38	YOL027C	UBP11	P36026	717 aa		4.5	□□□□□ -1.69
MDM38	YOL027C	MNN2	P38069	597 aa		4.5	□□□□□ -1.69
MDM38	YOL027C	DIA4	P38705	446 aa	Predicted RBP	4.5	□□□□□ -1.69
MDM38	YOL027C	MRX1	P40050	688 aa		4.5	□□□□□ -1.69
MDM38	YOL027C	ASG1	P40467	964 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms