RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	ABD1	P32783	436 aa	Predicted RBP	5.97	□□□□□ -1.45
CSL4	YNL232W	PMT1	P33775	817 aa		5.97	□□□□□ -1.45
CSL4	YNL232W	SLD2	P34252	453 aa		5.97	□□□□□ -1.45
CSL4	YNL232W	YKL151C	P36059	337 aa		5.97	□□□□□ -1.45
CSL4	YNL232W	SPC42	P36094	363 aa		5.97	□□□□□ -1.45
CSL4	YNL232W	GEX2	P36173	615 aa		5.97	□□□□□ -1.45
CSL4	YNL232W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.97	□□□□□ -1.45	not detected
CSL4	YNL232W	EMC4	P53073	190 aa		5.97	□□□□□ -1.45
CSL4	YNL232W	COG7	P53195	279 aa		5.97	□□□□□ -1.45
CSL4	YNL232W	COP1	P53622	1201 aa	Known RBP	5.97	□□□□□ -1.45
CSL4	YNL232W	GPD1	Q00055	391 aa	Known RBP	5.97	□□□□□ -1.45
CSL4	YNL232W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.97	□□□□□ -1.45	not detected
CSL4	YNL232W	PIR1	Q03178	341 aa		5.97	□□□□□ -1.45
CSL4	YNL232W	NOP12	Q08208	459 aa	Known RBP	5.97	□□□□□ -1.45
CSL4	YNL232W	YOL073C	Q08232	322 aa		5.97	□□□□□ -1.45
CSL4	YNL232W	ACM1	Q08981	209 aa		5.97	□□□□□ -1.45
CSL4	YNL232W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.97	□□□□□ -1.45	not detected
CSL4	YNL232W	SUC2	P00724	532 aa		5.96	□□□□□ -1.46
CSL4	YNL232W	ABF1	P14164	731 aa		5.96	□□□□□ -1.46
CSL4	YNL232W	DAL2	P25335	343 aa		5.96	□□□□□ -1.46
CSL4	YNL232W	CWP1	P28319	239 aa		5.96	□□□□□ -1.46
CSL4	YNL232W	PRX1	P34227	261 aa	Known RBP	5.96	□□□□□ -1.46
CSL4	YNL232W	CSG2	P35206	410 aa		5.96	□□□□□ -1.46
CSL4	YNL232W	MUM2	P38236	366 aa		5.96	□□□□□ -1.46
CSL4	YNL232W	TAE1	P38340	232 aa		5.96	□□□□□ -1.46
CSL4	YNL232W	CTM1	P38818	585 aa		5.96	□□□□□ -1.46
CSL4	YNL232W	AMA1	P50082	593 aa		5.96	□□□□□ -1.46
CSL4	YNL232W	PRM1	P53835	661 aa		5.96	□□□□□ -1.46
CSL4	YNL232W	GIR2	Q03768	265 aa	Predicted RBP	5.96	□□□□□ -1.46
CSL4	YNL232W	CSR1	Q06705	408 aa	Known RBP	5.96	□□□□□ -1.46
CSL4	YNL232W	SKM1	Q12469	655 aa		5.96	□□□□□ -1.46
CSL4	YNL232W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.95	□□□□□ -1.46	RIP-Chip
CSL4	YNL232W	BEM1	P29366	551 aa		5.95	□□□□□ -1.46
CSL4	YNL232W	DCG1	P32460	244 aa		5.95	□□□□□ -1.46
CSL4	YNL232W	PLB1	P39105	664 aa		5.95	□□□□□ -1.46
CSL4	YNL232W	MND2	P40577	368 aa		5.95	□□□□□ -1.46
CSL4	YNL232W	STU2	P46675	888 aa		5.95	□□□□□ -1.46
CSL4	YNL232W	MRX6	P48564	524 aa		5.95	□□□□□ -1.46
CSL4	YNL232W	TAN1	P53072	289 aa	Predicted RBP	5.95	□□□□□ -1.46
CSL4	YNL232W	SUR7	P54003	302 aa		5.95	□□□□□ -1.46
CSL4	YNL232W	ATG10	Q07879	167 aa		5.95	□□□□□ -1.46
CSL4	YNL232W	YOL075C	Q08234	1294 aa		5.95	□□□□□ -1.46
CSL4	YNL232W	PPR1	P07272	904 aa	Predicted RBP	5.94	□□□□□ -1.46
CSL4	YNL232W	OM45	P16547	393 aa		5.94	□□□□□ -1.46
CSL4	YNL232W	CHS7	P38843	316 aa		5.94	□□□□□ -1.46
CSL4	YNL232W	ELO1	P39540	310 aa		5.94	□□□□□ -1.46
CSL4	YNL232W	STL1	P39932	569 aa		5.94	□□□□□ -1.46
CSL4	YNL232W	YEL075C	P39972	122 aa		5.94	□□□□□ -1.46
CSL4	YNL232W	NBP35	P52920	328 aa		5.94	□□□□□ -1.46
CSL4	YNL232W	AIM14	P53109	570 aa		5.94	□□□□□ -1.46
CSL4	YNL232W	RSM10	Q03201	203 aa		5.94	□□□□□ -1.46
CSL4	YNL232W	TPO1	Q07824	586 aa		5.94	□□□□□ -1.46
CSL4	YNL232W	XYL2	Q07993	356 aa		5.94	□□□□□ -1.46
CSL4	YNL232W	FRE7	Q12333	620 aa		5.94	□□□□□ -1.46
CSL4	YNL232W	IPP1	P00817	287 aa	Known RBP	5.93	□□□□□ -1.46
CSL4	YNL232W	POL30	P15873	258 aa	Known RBP	5.93	□□□□□ -1.46
CSL4	YNL232W	MRP4	P32902	394 aa		5.93	□□□□□ -1.46
CSL4	YNL232W	VPS20	Q04272	221 aa		5.93	□□□□□ -1.46
CSL4	YNL232W	ENT2	Q05785	613 aa		5.93	□□□□□ -1.46
CSL4	YNL232W	ADY3	Q07732	790 aa		5.93	□□□□□ -1.46
CSL4	YNL232W	MPE1	P35728	441 aa	Known RBP	5.92	□□□□□ -1.46
CSL4	YNL232W	DEF1	P35732	738 aa	Known RBP	5.92	□□□□□ -1.46
CSL4	YNL232W	MSS4	P38994	779 aa		5.92	□□□□□ -1.46
CSL4	YNL232W	GLG2	P47011	380 aa		5.92	□□□□□ -1.46
CSL4	YNL232W	COS5	P47187	383 aa		5.92	□□□□□ -1.46
CSL4	YNL232W	KTR6	P54070	446 aa		5.92	□□□□□ -1.46
CSL4	YNL232W	SPP382	Q06411	708 aa	Predicted RBP	5.92	□□□□□ -1.46
CSL4	YNL232W	RRP15	Q06511	250 aa	Predicted RBP	5.92	□□□□□ -1.46
CSL4	YNL232W	THI20	Q08224	551 aa		5.92	□□□□□ -1.46
CSL4	YNL232W	EMP46	Q12396	444 aa		5.92	□□□□□ -1.46
CSL4	YNL232W	PEX11	Q12462	236 aa		5.92	□□□□□ -1.46
CSL4	YNL232W	STT4	P37297	1900 aa		5.91	□□□□□ -1.46
CSL4	YNL232W	EBP2	P36049	427 aa	Known RBP	5.91	□□□□□ -1.46
CSL4	YNL232W	APM3	P38153	483 aa		5.91	□□□□□ -1.46
CSL4	YNL232W	RFT1	P38206	574 aa	Predicted RBP	5.91	□□□□□ -1.46
CSL4	YNL232W	HSL7	P38274	827 aa		5.91	□□□□□ -1.46
CSL4	YNL232W	PCA1	P38360	1216 aa		5.91	□□□□□ -1.46
CSL4	YNL232W	CBR1	P38626	284 aa	Known RBP	5.91	□□□□□ -1.46
CSL4	YNL232W	VAC8	P39968	578 aa		5.91	□□□□□ -1.46
CSL4	YNL232W	EDC3	P39998	551 aa	Known RBP	5.91	□□□□□ -1.46
CSL4	YNL232W	ZRG8	P40021	1076 aa		5.91	□□□□□ -1.46
CSL4	YNL232W	MET12	P46151	657 aa		5.91	□□□□□ -1.46
CSL4	YNL232W	SNG1	P46950	547 aa		5.91	□□□□□ -1.46
CSL4	YNL232W	ARA2	Q04212	335 aa		5.91	□□□□□ -1.46
CSL4	YNL232W	YLR297W	Q05899	129 aa		5.91	□□□□□ -1.46
CSL4	YNL232W	SEC39	Q12745	709 aa		5.91	□□□□□ -1.46
CSL4	YNL232W	SST2	P11972	698 aa	Known RBP	5.9	□□□□□ -1.46
CSL4	YNL232W	MET16	P18408	261 aa	Predicted RBP	5.9	□□□□□ -1.46
CSL4	YNL232W	TOA1	P32773	286 aa		5.9	□□□□□ -1.46
CSL4	YNL232W	NPR3	P38742	1146 aa		5.9	□□□□□ -1.46
CSL4	YNL232W	CFD1	P40558	293 aa		5.9	□□□□□ -1.46
CSL4	YNL232W	ALR2	P43553	858 aa		5.9	□□□□□ -1.46
CSL4	YNL232W	MNT2	P53059	558 aa		5.9	□□□□□ -1.46
CSL4	YNL232W	YMR178W	Q03219	274 aa	Known RBP	5.9	□□□□□ -1.46
CSL4	YNL232W	VHS1	Q03785	461 aa		5.9	□□□□□ -1.46
CSL4	YNL232W	YDR131C	Q03899	556 aa		5.9	□□□□□ -1.46
CSL4	YNL232W	YMR018W	Q04364	514 aa		5.9	□□□□□ -1.46
CSL4	YNL232W	MCP2	Q06567	569 aa		5.9	□□□□□ -1.46
CSL4	YNL232W	SFI1	Q12369	946 aa		5.9	□□□□□ -1.46
CSL4	YNL232W	ENA1	P13587	1091 aa		5.89	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms