RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C PHO11P35842 467 aa2.53□□□□□ -2
SGS1YMR190C EAP1P36041 632 aaKnown RBP2.53□□□□□ -2
SGS1YMR190C PHO12P38693 467 aa2.53□□□□□ -2
SGS1YMR190C END3P39013 349 aa2.53□□□□□ -2
SGS1YMR190C MEP1P40260 492 aa2.53□□□□□ -2
SGS1YMR190C CPR7P47103 393 aa2.53□□□□□ -2
SGS1YMR190C HSV2P50079 448 aaPredicted RBP2.53□□□□□ -2
SGS1YMR190C PCL10P53124 433 aa2.53□□□□□ -2
SGS1YMR190C CPR6P53691 371 aaKnown RBP2.53□□□□□ -2
SGS1YMR190C YPQ1Q12010 308 aa2.53□□□□□ -2
SGS1YMR190C HSP42Q12329 375 aa2.53□□□□□ -2
SGS1YMR190C TOM1Q03280 3268 aa2.52□□□□□ -2.01
SGS1YMR190C VAC17P25591 423 aa2.52□□□□□ -2.01
SGS1YMR190C CAB3P36076 571 aa2.52□□□□□ -2.01
SGS1YMR190C LAS1P36146 502 aaPredicted RBP2.52□□□□□ -2.01
SGS1YMR190C YRO2P38079 344 aa2.52□□□□□ -2.01
SGS1YMR190C RRN7P40992 514 aa2.52□□□□□ -2.01
SGS1YMR190C GCV1P48015 400 aa2.52□□□□□ -2.01
SGS1YMR190C VPS73P53142 486 aaKnown RBP2.52□□□□□ -2.01
SGS1YMR190C TEP1P53916 434 aa2.52□□□□□ -2.01
SGS1YMR190C ATG16Q03818 150 aa2.52□□□□□ -2.01
SGS1YMR190C URH1Q04179 340 aa2.52□□□□□ -2.01
SGS1YMR190C AIM32Q04689 311 aa2.52□□□□□ -2.01
SGS1YMR190C ESA1Q08649 445 aa2.52□□□□□ -2.01
SGS1YMR190C TMS1Q12116 473 aa2.52□□□□□ -2.01
SGS1YMR190C YOR338WQ99326 363 aa2.52□□□□□ -2.01
SGS1YMR190C ENO1P00924 437 aaKnown RBP2.52□□□□□ -2.01
SGS1YMR190C RPL17AP05740 184 aaKnown RBP2.52□□□□□ -2.01
SGS1YMR190C RAD10P06838 210 aa2.52□□□□□ -2.01
SGS1YMR190C MOD5P07884 428 aa2.52□□□□□ -2.01
SGS1YMR190C MVD1P32377 396 aaKnown RBP2.52□□□□□ -2.01
SGS1YMR190C NFU1P32860 256 aa2.52□□□□□ -2.01
SGS1YMR190C YMR124WP39523 943 aaKnown RBP2.52□□□□□ -2.01
SGS1YMR190C PRE6P40303 254 aaKnown RBP2.52□□□□□ -2.01
SGS1YMR190C SAE2P46946 345 aa2.52□□□□□ -2.01
SGS1YMR190C RPL17BP46990 184 aaKnown RBP2.52□□□□□ -2.01
SGS1YMR190C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
SGS1YMR190C IWR1Q07532 353 aaPredicted RBP2.52□□□□□ -2.01
SGS1YMR190C THI20Q08224 551 aa2.52□□□□□ -2.01
SGS1YMR190C IRC13Q08630 104 aa2.52□□□□□ -2.01
SGS1YMR190C CMR1Q12510 522 aaKnown RBP2.52□□□□□ -2.01
SGS1YMR190C YOS9Q99220 542 aa2.52□□□□□ -2.01
SGS1YMR190C MEF1P25039 761 aa2.52□□□□□ -2.01
SGS1YMR190C ISF1P32488 338 aa2.52□□□□□ -2.01
SGS1YMR190C FRE1P32791 686 aa2.52□□□□□ -2.01
SGS1YMR190C TOM20P35180 183 aa2.52□□□□□ -2.01
SGS1YMR190C CSG2P35206 410 aa2.52□□□□□ -2.01
SGS1YMR190C BLI1P35727 113 aa2.52□□□□□ -2.01
SGS1YMR190C DCW1P36091 449 aa2.52□□□□□ -2.01
SGS1YMR190C RPF2P36160 344 aaKnown RBP2.52□□□□□ -2.01
SGS1YMR190C KAP104P38217 918 aaKnown RBP2.52□□□□□ -2.01
SGS1YMR190C YHR033WP38690 423 aa2.52□□□□□ -2.01
SGS1YMR190C AVT2P39981 480 aa2.52□□□□□ -2.01
SGS1YMR190C PXA1P41909 870 aa2.52□□□□□ -2.01
SGS1YMR190C HLJ1P48353 224 aa2.52□□□□□ -2.01
SGS1YMR190C YGR111WP53265 400 aa2.52□□□□□ -2.01
SGS1YMR190C CWC22P53333 577 aaKnown RBP2.52□□□□□ -2.01
SGS1YMR190C SLT2Q00772 484 aa2.52□□□□□ -2.01
SGS1YMR190C IVY1Q04934 453 aa2.52□□□□□ -2.01
SGS1YMR190C YPR147CQ06522 304 aaKnown RBP2.52□□□□□ -2.01
SGS1YMR190C OMS1Q06668 471 aa2.52□□□□□ -2.01
SGS1YMR190C VPS68Q12016 184 aa2.52□□□□□ -2.01
SGS1YMR190C YLR462WO13556 202 aa2.51□□□□□ -2.01
SGS1YMR190C BCY1P07278 416 aaKnown RBP2.51□□□□□ -2.01
SGS1YMR190C CHS2P14180 963 aa2.51□□□□□ -2.01
SGS1YMR190C HEM15P16622 393 aa2.51□□□□□ -2.01
SGS1YMR190C GCD6P32501 712 aaKnown RBP2.51□□□□□ -2.01
SGS1YMR190C HCS1P34243 683 aa2.51□□□□□ -2.01
SGS1YMR190C CTF13P35203 478 aa2.51□□□□□ -2.01
SGS1YMR190C YBP1P38315 674 aa2.51□□□□□ -2.01
SGS1YMR190C YHL049CP38722 271 aa2.51□□□□□ -2.01
SGS1YMR190C DYS1P38791 387 aa2.51□□□□□ -2.01
SGS1YMR190C VPS52P39904 641 aa2.51□□□□□ -2.01
SGS1YMR190C YEL075CP39972 122 aa2.51□□□□□ -2.01
SGS1YMR190C YER189WP40104 122 aa2.51□□□□□ -2.01
SGS1YMR190C YFL064CP43540 174 aa2.51□□□□□ -2.01
SGS1YMR190C NMD5P46970 1048 aa2.51□□□□□ -2.01
SGS1YMR190C MND1P53102 219 aa2.51□□□□□ -2.01
SGS1YMR190C NRM1P53718 249 aa2.51□□□□□ -2.01
SGS1YMR190C YPL062WQ02781 134 aa2.51□□□□□ -2.01
SGS1YMR190C HER2Q03557 464 aa2.51□□□□□ -2.01
SGS1YMR190C SXM1Q04175 944 aaKnown RBP2.51□□□□□ -2.01
SGS1YMR190C YBL111CQ3E7Y5 667 aa2.51□□□□□ -2.01
SGS1YMR190C TOR2P32600 2474 aaKnown RBP2.51□□□□□ -2.01
SGS1YMR190C IME1P21190 360 aa2.51□□□□□ -2.01
SGS1YMR190C NPP1P25353 742 aa2.51□□□□□ -2.01
SGS1YMR190C YJU3P28321 313 aa2.51□□□□□ -2.01
SGS1YMR190C MKK2P32491 506 aa2.51□□□□□ -2.01
SGS1YMR190C KAP122P32767 1081 aa2.51□□□□□ -2.01
SGS1YMR190C MRS6P32864 603 aaKnown RBP2.51□□□□□ -2.01
SGS1YMR190C HES1P35843 434 aa2.51□□□□□ -2.01
SGS1YMR190C RSM22P36056 628 aa2.51□□□□□ -2.01
SGS1YMR190C LSC1P53598 329 aaKnown RBP2.51□□□□□ -2.01
SGS1YMR190C PRM1P53835 661 aa2.51□□□□□ -2.01
SGS1YMR190C YNL092WP53934 400 aa2.51□□□□□ -2.01
SGS1YMR190C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01 RIP-Chip
SGS1YMR190C YMR114CQ04471 368 aaKnown RBP2.51□□□□□ -2.01
SGS1YMR190C ECM22Q05958 814 aaPredicted RBP2.51□□□□□ -2.01
SGS1YMR190C STE23Q06010 1027 aa2.51□□□□□ -2.01
SGS1YMR190C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms