RNA–Protein interactions for RNA: YLR248W

RCK2, Transcript of Protein kinase involved in response to oxidative and osmotic stress, yeast

Gene RCK2, Length 1,833 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCK2	YLR248W	YNL146W	P53906	100 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	ARG5,6	Q01217	863 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	UTP6	Q02354	440 aa	Known RBP	4.88	□□□□□ -1.63
RCK2	YLR248W	STP4	Q07351	490 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	IWR1	Q07532	353 aa	Predicted RBP	4.88	□□□□□ -1.63
RCK2	YLR248W	LAS17	Q12446	633 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	RPS17A	P02407	136 aa	Known RBP	4.88	□□□□□ -1.63
RCK2	YLR248W	MSS18	P08593	268 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	RPS17B	P14127	136 aa	Known RBP	4.88	□□□□□ -1.63
RCK2	YLR248W	KAR3	P17119	729 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	CDC42	P19073	191 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	RNR1	P21524	888 aa	Known RBP	4.88	□□□□□ -1.63
RCK2	YLR248W	GPI10	P30777	616 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	DBF4	P32325	704 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	MF(ALPHA)2	P32435	120 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	APN2	P38207	520 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	TIF5	P38431	405 aa	Known RBP	4.88	□□□□□ -1.63
RCK2	YLR248W	MMS21	P38632	267 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	END3	P39013	349 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	ASG1	P40467	964 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	IRC5	P43610	853 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	PHO86	P46956	311 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	CUL3	P53202	744 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	GPD1	Q00055	391 aa	Known RBP	4.88	□□□□□ -1.63
RCK2	YLR248W	RPA49	Q01080	415 aa	Predicted RBP	4.88	□□□□□ -1.63
RCK2	YLR248W	ATG16	Q03818	150 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	RXT3	Q07458	294 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	SDH5	Q08230	162 aa		4.88	□□□□□ -1.63
RCK2	YLR248W	CFT2	Q12102	859 aa	Predicted RBP	4.88	□□□□□ -1.63
RCK2	YLR248W	RPP2A	P05319	106 aa	Known RBP	4.87	□□□□□ -1.63
RCK2	YLR248W	YBL055C	P34220	418 aa	Predicted RBP	4.87	□□□□□ -1.63
RCK2	YLR248W	KTR4	P38131	464 aa		4.87	□□□□□ -1.63
RCK2	YLR248W	YHR112C	P38716	378 aa		4.87	□□□□□ -1.63
RCK2	YLR248W	YHL041W	P38730	149 aa		4.87	□□□□□ -1.63
RCK2	YLR248W	SAP185	P40856	1058 aa		4.87	□□□□□ -1.63
RCK2	YLR248W	NET1	P47035	1189 aa		4.87	□□□□□ -1.63
RCK2	YLR248W	RRT6	P53117	311 aa	Predicted RBP	4.87	□□□□□ -1.63
RCK2	YLR248W	DRN1	P53255	507 aa	Known RBP	4.87	□□□□□ -1.63
RCK2	YLR248W	MTG1	Q03151	367 aa	Predicted RBP	4.87	□□□□□ -1.63
RCK2	YLR248W	USA1	Q03714	838 aa		4.87	□□□□□ -1.63
RCK2	YLR248W	YLR224W	Q05947	369 aa		4.87	□□□□□ -1.63
RCK2	YLR248W	CDA2	Q06703	312 aa		4.87	□□□□□ -1.63
RCK2	YLR248W	SWM1	Q12379	170 aa		4.87	□□□□□ -1.63
RCK2	YLR248W	YOL087C	Q99247	1116 aa		4.87	□□□□□ -1.63
RCK2	YLR248W	AI5_BETA	Q9ZZX0	354 aa		4.87	□□□□□ -1.63
RCK2	YLR248W	TRX2	P22803	104 aa	Known RBP	4.86	□□□□□ -1.63
RCK2	YLR248W	EFT1	P32324	842 aa	Known RBP	4.86	□□□□□ -1.63
RCK2	YLR248W	GYP6	P32806	458 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	VID24	P38263	362 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	MSG5	P38590	489 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	PLB1	P39105	664 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	FTR1	P40088	404 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	SMX2	P40204	77 aa	Known RBP	4.86	□□□□□ -1.63
RCK2	YLR248W	TRS85	P46944	698 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	URB2	P47108	1174 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	SCS3	P53012	380 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	CPR6	P53691	371 aa	Known RBP	4.86	□□□□□ -1.63
RCK2	YLR248W	SVL3	Q03088	825 aa	Known RBP	4.86	□□□□□ -1.63
RCK2	YLR248W	TRS130	Q03660	1102 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	UFO1	Q04511	668 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	NGL1	Q08213	363 aa	Known RBP	4.86	□□□□□ -1.63
RCK2	YLR248W	ECM3	Q99252	613 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	BI2	P03873	423 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	RPS3	P05750	240 aa	Known RBP	4.86	□□□□□ -1.63
RCK2	YLR248W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
RCK2	YLR248W	ERG6	P25087	383 aa	Known RBP	4.86	□□□□□ -1.63
RCK2	YLR248W	KIN82	P25341	720 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	RRT12	P25381	491 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	KAR4	P25583	335 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	YUR1	P26725	428 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	OMA1	P36163	345 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	VHC1	P38329	1120 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	CBR1	P38626	284 aa	Known RBP	4.86	□□□□□ -1.63
RCK2	YLR248W	YIL089W	P40500	205 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	QRI7	P43122	407 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	RIP-Chip
RCK2	YLR248W	MDR1	P53258	950 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	PIG1	Q06216	648 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	SHS1	Q07657	551 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	ABP140	Q08641	628 aa	Known RBP	4.86	□□□□□ -1.63
RCK2	YLR248W	HIF1	Q12373	385 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	GIS3	Q12418	502 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	TRM11	Q12463	433 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	SEY1	Q99287	776 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	BI3	Q9ZZW7	517 aa		4.86	□□□□□ -1.63
RCK2	YLR248W	RPS13	P05756	151 aa	Known RBP	4.85	□□□□□ -1.63
RCK2	YLR248W	ADH4	P10127	382 aa		4.85	□□□□□ -1.63
RCK2	YLR248W	RPL4A	P10664	362 aa	Known RBP	4.85	□□□□□ -1.63
RCK2	YLR248W	PEP5	P12868	1029 aa		4.85	□□□□□ -1.63
RCK2	YLR248W	NAT1	P12945	854 aa	Known RBP	4.85	□□□□□ -1.63
RCK2	YLR248W	POL3	P15436	1097 aa		4.85	□□□□□ -1.63
RCK2	YLR248W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
RCK2	YLR248W	SEG2	P34250	1132 aa		4.85	□□□□□ -1.63
RCK2	YLR248W	CTF13	P35203	478 aa		4.85	□□□□□ -1.63
RCK2	YLR248W	ECM1	P39715	212 aa		4.85	□□□□□ -1.63
RCK2	YLR248W	YNL195C	P40168	261 aa		4.85	□□□□□ -1.63
RCK2	YLR248W	HIS6	P40545	261 aa		4.85	□□□□□ -1.63
RCK2	YLR248W	INA22	P40576	216 aa		4.85	□□□□□ -1.63
RCK2	YLR248W	PXA1	P41909	870 aa		4.85	□□□□□ -1.63
RCK2	YLR248W	ZAP1	P47043	880 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms