RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C YFH1Q07540 174 aa2.34□□□□□ -2.04
CSF1YLR087C THI73Q07904 523 aa2.34□□□□□ -2.04
CSF1YLR087C RPN8Q08723 338 aaKnown RBP2.34□□□□□ -2.04
CSF1YLR087C KCS1Q12494 1050 aa2.34□□□□□ -2.04
CSF1YLR087C AFI1Q99222 893 aa2.34□□□□□ -2.04
CSF1YLR087C ERD1P16151 362 aa2.33□□□□□ -2.04
CSF1YLR087C MRPL32P25348 183 aa2.33□□□□□ -2.04
CSF1YLR087C CIN8P27895 1000 aa2.33□□□□□ -2.04
CSF1YLR087C GCD6P32501 712 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C JEN1P36035 616 aa2.33□□□□□ -2.04
CSF1YLR087C RCN1P36054 211 aa2.33□□□□□ -2.04
CSF1YLR087C MRPL10P36520 322 aa2.33□□□□□ -2.04
CSF1YLR087C TAT2P38967 592 aa2.33□□□□□ -2.04
CSF1YLR087C SAK1P38990 1142 aa2.33□□□□□ -2.04
CSF1YLR087C CCC2P38995 1004 aa2.33□□□□□ -2.04
CSF1YLR087C ZDS2P54786 942 aa2.33□□□□□ -2.04
CSF1YLR087C OYE2Q03558 400 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C BUR2Q05949 395 aa2.33□□□□□ -2.04
CSF1YLR087C CSC1Q06538 782 aa2.33□□□□□ -2.04
CSF1YLR087C BUD21Q08492 214 aaPredicted RBP2.33□□□□□ -2.04
CSF1YLR087C OSW2Q12202 724 aa2.33□□□□□ -2.04
CSF1YLR087C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
CSF1YLR087C PUT2P07275 575 aa2.33□□□□□ -2.04
CSF1YLR087C PBI2P0CT04 75 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C COQ8P27697 501 aa2.33□□□□□ -2.04
CSF1YLR087C CDC13P32797 924 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C PTM1P32857 523 aa2.33□□□□□ -2.04
CSF1YLR087C RPT1P33299 467 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C BUD2P33314 1104 aa2.33□□□□□ -2.04
CSF1YLR087C GEX2P36173 615 aa2.33□□□□□ -2.04
CSF1YLR087C RRT2P38332 387 aa2.33□□□□□ -2.04
CSF1YLR087C COX15P40086 486 aa2.33□□□□□ -2.04
CSF1YLR087C YIL089WP40500 205 aa2.33□□□□□ -2.04
CSF1YLR087C INA22P40576 216 aa2.33□□□□□ -2.04
CSF1YLR087C BNA3P47039 444 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C GTF1P53260 183 aaPredicted RBP2.33□□□□□ -2.04
CSF1YLR087C PRO2P54885 456 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C DIS3Q08162 1001 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C GAS4Q08271 471 aa2.33□□□□□ -2.04
CSF1YLR087C AFT2Q08957 416 aa2.33□□□□□ -2.04
CSF1YLR087C ZRT2Q12436 422 aa2.33□□□□□ -2.04
CSF1YLR087C RAD14P28519 371 aa2.33□□□□□ -2.04
CSF1YLR087C YHL008CP38750 627 aa2.33□□□□□ -2.04
CSF1YLR087C GPB2P39717 880 aa2.33□□□□□ -2.04
CSF1YLR087C SLM1P40485 686 aa2.33□□□□□ -2.04
CSF1YLR087C PSP2P50109 593 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C RAD30Q04049 632 aa2.33□□□□□ -2.04
CSF1YLR087C RDR1Q08904 546 aa2.33□□□□□ -2.04
CSF1YLR087C NUR1Q12066 484 aa2.33□□□□□ -2.04
CSF1YLR087C PHM7Q12252 991 aa2.33□□□□□ -2.04
CSF1YLR087C LPD1P09624 499 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C UGA1P17649 471 aa2.33□□□□□ -2.04
CSF1YLR087C CAM1P29547 415 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C ERC1P38767 581 aa2.33□□□□□ -2.04
CSF1YLR087C SSN3P39073 555 aa2.33□□□□□ -2.04
CSF1YLR087C MAM1P40065 302 aa2.33□□□□□ -2.04
CSF1YLR087C SOK2P53438 785 aaPredicted RBP2.33□□□□□ -2.04
CSF1YLR087C MUB1Q03162 620 aa2.33□□□□□ -2.04
CSF1YLR087C ENT5Q03769 411 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C YMR027WQ04371 470 aa2.33□□□□□ -2.04
CSF1YLR087C FAR8Q05040 523 aa2.33□□□□□ -2.04
CSF1YLR087C MLH2Q07980 695 aa2.33□□□□□ -2.04
CSF1YLR087C ISN1Q99312 450 aa2.33□□□□□ -2.04
CSF1YLR087C SAS5Q99314 248 aa2.33□□□□□ -2.04
CSF1YLR087C TRP2P00899 507 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C URA3P03962 267 aa2.33□□□□□ -2.04
CSF1YLR087C RER1P25560 188 aa2.33□□□□□ -2.04
CSF1YLR087C GCD7P32502 381 aaPredicted RBP2.33□□□□□ -2.04
CSF1YLR087C MAE1P36013 669 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C IRS4P36115 615 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C YKR075CP36155 307 aa2.33□□□□□ -2.04
CSF1YLR087C YBR062CP38239 180 aa2.33□□□□□ -2.04
CSF1YLR087C YHR054CP38780 354 aa2.33□□□□□ -2.04
CSF1YLR087C FLC2P39719 783 aa2.33□□□□□ -2.04
CSF1YLR087C RRT14P40470 206 aa2.33□□□□□ -2.04
CSF1YLR087C SSU1P41930 458 aa2.33□□□□□ -2.04
CSF1YLR087C YGR015CP53208 328 aa2.33□□□□□ -2.04
CSF1YLR087C PEX8P53248 589 aa2.33□□□□□ -2.04
CSF1YLR087C COG5P53951 403 aa2.33□□□□□ -2.04
CSF1YLR087C EFG1Q3E705 233 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C CET1O13297 549 aaPredicted RBP2.33□□□□□ -2.04
CSF1YLR087C CYC3P06182 269 aa2.33□□□□□ -2.04
CSF1YLR087C HYM1P32464 399 aa2.33□□□□□ -2.04
CSF1YLR087C YKL077WP36081 392 aa2.33□□□□□ -2.04
CSF1YLR087C DID4P36108 232 aa2.33□□□□□ -2.04
CSF1YLR087C PXL1P36166 706 aa2.33□□□□□ -2.04
CSF1YLR087C YMR134WP40207 237 aa2.33□□□□□ -2.04
CSF1YLR087C ICE2P40499 491 aa2.33□□□□□ -2.04
CSF1YLR087C SPO74P45819 413 aa2.33□□□□□ -2.04
CSF1YLR087C RTT101P47050 842 aa2.33□□□□□ -2.04
CSF1YLR087C TUB4P53378 473 aa2.33□□□□□ -2.04
CSF1YLR087C SPC98P53540 846 aa2.33□□□□□ -2.04
CSF1YLR087C FOX2Q02207 900 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C WAR1Q03631 944 aa2.33□□□□□ -2.04
CSF1YLR087C GSF2Q04697 403 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C DAS2Q12084 232 aa2.33□□□□□ -2.04
CSF1YLR087C RIB2Q12362 591 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C NCA2Q12374 616 aa2.33□□□□□ -2.04
CSF1YLR087C GRX6Q12438 231 aa2.33□□□□□ -2.04
CSF1YLR087C NTE1Q04958 1679 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms