RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W YEL057CP39983 233 aa4.28□□□□□ -1.72
CTK1YKL139W AXL1P40851 1208 aa4.28□□□□□ -1.72
CTK1YKL139W ADE16P54113 591 aaKnown RBP4.28□□□□□ -1.72
CTK1YKL139W YML037CQ03703 340 aa4.28□□□□□ -1.72
CTK1YKL139W GFD1Q04839 188 aaKnown RBP4.28□□□□□ -1.72
CTK1YKL139W SFI1Q12369 946 aa4.28□□□□□ -1.72
CTK1YKL139W RRP43P25359 394 aaPredicted RBP4.27□□□□□ -1.73
CTK1YKL139W MRPL9P31334 269 aa4.27□□□□□ -1.73
CTK1YKL139W NTR2P36118 322 aaPredicted RBP4.27□□□□□ -1.73
CTK1YKL139W DCP2P53550 970 aaKnown RBP4.27□□□□□ -1.73
CTK1YKL139W WAR1Q03631 944 aa4.27□□□□□ -1.73
CTK1YKL139W RAD33Q04231 177 aa4.27□□□□□ -1.73
CTK1YKL139W PSR1Q07800 427 aa4.27□□□□□ -1.73
CTK1YKL139W PDX1P16451 410 aa4.27□□□□□ -1.73
CTK1YKL139W VBA2P38358 474 aaKnown RBP4.27□□□□□ -1.73
CTK1YKL139W GIP4P39732 760 aa4.27□□□□□ -1.73
CTK1YKL139W YGL117WP53133 265 aa4.27□□□□□ -1.73
CTK1YKL139W SUN4P53616 420 aa4.27□□□□□ -1.73
CTK1YKL139W CPR8P53728 308 aa4.27□□□□□ -1.73
CTK1YKL139W INA17Q02888 182 aa4.27□□□□□ -1.73
CTK1YKL139W PLM2Q04383 521 aa4.27□□□□□ -1.73
CTK1YKL139W YLR352WQ06479 807 aa4.27□□□□□ -1.73
CTK1YKL139W URN1Q06525 465 aaKnown RBP4.27□□□□□ -1.73
CTK1YKL139W HBT1Q07653 1046 aaKnown RBP4.27□□□□□ -1.73
CTK1YKL139W YEH1Q07804 573 aa4.27□□□□□ -1.73
CTK1YKL139W YPL191CQ08930 360 aa4.27□□□□□ -1.73
CTK1YKL139W ACF2Q12168 779 aa4.27□□□□□ -1.73
CTK1YKL139W AHA1Q12449 350 aaKnown RBP4.27□□□□□ -1.73
CTK1YKL139W PCT1P13259 424 aa4.26□□□□□ -1.73
CTK1YKL139W SRP54P20424 541 aaKnown RBP4.26□□□□□ -1.73
CTK1YKL139W DBF4P32325 704 aa4.26□□□□□ -1.73
CTK1YKL139W ORC2P32833 620 aa4.26□□□□□ -1.73
CTK1YKL139W PEX5P35056 612 aa4.26□□□□□ -1.73
CTK1YKL139W SRP72P38688 640 aaKnown RBP4.26□□□□□ -1.73
CTK1YKL139W STB4P50104 949 aa4.26□□□□□ -1.73
CTK1YKL139W SXM1Q04175 944 aaKnown RBP4.26□□□□□ -1.73
CTK1YKL139W BUD7Q08754 746 aa4.26□□□□□ -1.73
CTK1YKL139W YPL272CQ08984 517 aa4.26□□□□□ -1.73
CTK1YKL139W TAF3Q12297 353 aa4.26□□□□□ -1.73
CTK1YKL139W GRX6Q12438 231 aa4.26□□□□□ -1.73
CTK1YKL139W SMC6Q12749 1114 aa4.26□□□□□ -1.73
CTK1YKL139W YJR112W-AQ3E743 109 aa4.26□□□□□ -1.73
CTK1YKL139W YPT6Q99260 215 aa4.26□□□□□ -1.73
CTK1YKL139W TPK2P06245 380 aa4.25□□□□□ -1.73
CTK1YKL139W SES1P07284 462 aaKnown RBP4.25□□□□□ -1.73
CTK1YKL139W YIH1P25637 258 aa4.25□□□□□ -1.73
CTK1YKL139W PDB1P32473 366 aaKnown RBP4.25□□□□□ -1.73
CTK1YKL139W SWI3P32591 825 aa4.25□□□□□ -1.73
CTK1YKL139W AAP1P37898 856 aaKnown RBP4.25□□□□□ -1.73
CTK1YKL139W AGP2P38090 596 aa4.25□□□□□ -1.73
CTK1YKL139W YNG2P38806 282 aaKnown RBP4.25□□□□□ -1.73
CTK1YKL139W CCT6P39079 546 aa4.25□□□□□ -1.73
CTK1YKL139W AFG3P39925 761 aa4.25□□□□□ -1.73
CTK1YKL139W DOT5P40553 215 aa4.25□□□□□ -1.73
CTK1YKL139W SGN1P40561 250 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
CTK1YKL139W MET28P40573 187 aa4.25□□□□□ -1.73
CTK1YKL139W YFL015CP43578 164 aa4.25□□□□□ -1.73
CTK1YKL139W RPS7BP48164 190 aaKnown RBP4.25□□□□□ -1.73
CTK1YKL139W ASN1P49089 572 aaKnown RBP4.25□□□□□ -1.73
CTK1YKL139W AAT1Q01802 451 aa4.25□□□□□ -1.73
CTK1YKL139W RSM28Q03430 361 aa4.25□□□□□ -1.73
CTK1YKL139W BUD22Q04347 519 aaKnown RBP4.25□□□□□ -1.73
CTK1YKL139W HRD3Q05787 833 aa4.25□□□□□ -1.73
CTK1YKL139W ARD1P07347 238 aaPredicted RBP4.24□□□□□ -1.73
CTK1YKL139W STE12P13574 688 aa4.24□□□□□ -1.73
CTK1YKL139W PWP1P21304 576 aaKnown RBP4.24□□□□□ -1.73
CTK1YKL139W VMA16P23968 213 aa4.24□□□□□ -1.73
CTK1YKL139W KES1P35844 434 aaKnown RBP4.24□□□□□ -1.73
CTK1YKL139W MNN2P38069 597 aa4.24□□□□□ -1.73
CTK1YKL139W SEC31P38968 1273 aaKnown RBP4.24□□□□□ -1.73
CTK1YKL139W BUR6P40096 142 aa4.24□□□□□ -1.73
CTK1YKL139W MET18P40469 1032 aa4.24□□□□□ -1.73
CTK1YKL139W MAF1P41910 395 aa4.24□□□□□ -1.73
CTK1YKL139W CTK2P46962 323 aa4.24□□□□□ -1.73
CTK1YKL139W STR3P53101 465 aaKnown RBP4.24□□□□□ -1.73
CTK1YKL139W YGR066CP53242 292 aa4.24□□□□□ -1.73
CTK1YKL139W RIM20Q12033 661 aa4.24□□□□□ -1.73
CTK1YKL139W YOL159C-AQ3E769 90 aa4.24□□□□□ -1.73
CTK1YKL139W DFR1P07807 211 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
CTK1YKL139W KIN3P22209 435 aa4.23□□□□□ -1.73
CTK1YKL139W GPI10P30777 616 aa4.23□□□□□ -1.73
CTK1YKL139W SOF1P33750 489 aaKnown RBP4.23□□□□□ -1.73
CTK1YKL139W LHS1P36016 881 aa4.23□□□□□ -1.73
CTK1YKL139W UBP11P36026 717 aa4.23□□□□□ -1.73
CTK1YKL139W MUM2P38236 366 aa4.23□□□□□ -1.73
CTK1YKL139W SMF1P38925 575 aa4.23□□□□□ -1.73
CTK1YKL139W YML6P51998 286 aa4.23□□□□□ -1.73
CTK1YKL139W JJJ1P53863 590 aa4.23□□□□□ -1.73
CTK1YKL139W TIM44Q01852 431 aa4.23□□□□□ -1.73
CTK1YKL139W YDR131CQ03899 556 aa4.23□□□□□ -1.73
CTK1YKL139W SEC3P33332 1336 aaKnown RBP4.23□□□□□ -1.73
CTK1YKL139W RPL7AP05737 244 aaKnown RBP4.23□□□□□ -1.73
CTK1YKL139W EST1P17214 699 aaPredicted RBP4.23□□□□□ -1.73
CTK1YKL139W OPI1P21957 404 aa4.23□□□□□ -1.73
CTK1YKL139W YJU2P28320 278 aaPredicted RBP4.23□□□□□ -1.73
CTK1YKL139W MRX1P40050 688 aa4.23□□□□□ -1.73
CTK1YKL139W LTP1P40347 161 aa4.23□□□□□ -1.73
CTK1YKL139W SDS3P40505 327 aa4.23□□□□□ -1.73
CTK1YKL139W ROK1P45818 564 aaPredicted RBP4.23□□□□□ -1.73
CTK1YKL139W ZDS2P54786 942 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms