RNA–Protein interactions for RNA: YIR022W

SEC11, Transcript of 18kDa catalytic subunit of the Signal Peptidase Complex (SPC), yeast

Gene SEC11, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC11	YIR022W	YCR090C	P25654	182 aa	Known RBP	11.75	□□□□□ -0.53
SEC11	YIR022W	CSE1	P33307	960 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	YKR023W	P36119	530 aa	Known RBP	11.75	□□□□□ -0.53
SEC11	YIR022W	AGP2	P38090	596 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	DSF2	P38213	736 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	YHL012W	P38709	493 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	PRM9	P39551	298 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	MET18	P40469	1032 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	MAF1	P41910	395 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	ELP2	P42935	788 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	STB2	P46679	850 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	PEX8	P53248	589 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	CIK1	Q01649	594 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	CLU1	Q03690	1277 aa	Known RBP	11.75	□□□□□ -0.53
SEC11	YIR022W	ARP9	Q05123	467 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	CFT2	Q12102	859 aa	Predicted RBP	11.75	□□□□□ -0.53
SEC11	YIR022W	SAS5	Q99314	248 aa		11.75	□□□□□ -0.53
SEC11	YIR022W	LAA1	P39526	2014 aa		11.74	□□□□□ -0.53
SEC11	YIR022W	BUD23	P25627	275 aa	Predicted RBP	11.74	□□□□□ -0.53
SEC11	YIR022W	DOM34	P33309	386 aa		11.74	□□□□□ -0.53
SEC11	YIR022W	YBL029W	P38201	376 aa		11.74	□□□□□ -0.53
SEC11	YIR022W	IST2	P38250	946 aa		11.74	□□□□□ -0.53
SEC11	YIR022W	DSS1	P39112	969 aa		11.74	□□□□□ -0.53
SEC11	YIR022W	YJR061W	P40355	935 aa		11.74	□□□□□ -0.53
SEC11	YIR022W	ISM1	P48526	1002 aa		11.74	□□□□□ -0.53
SEC11	YIR022W	YNL095C	P53932	642 aa		11.74	□□□□□ -0.53
SEC11	YIR022W	SVL3	Q03088	825 aa	Known RBP	11.74	□□□□□ -0.53
SEC11	YIR022W	SNU56	Q03782	492 aa	Known RBP	11.74	□□□□□ -0.53
SEC11	YIR022W	HER1	Q12276	1246 aa		11.74	□□□□□ -0.53
SEC11	YIR022W	CBP2	P03874	630 aa	Predicted RBP	11.73	□□□□□ -0.53
SEC11	YIR022W	RAP1	P11938	827 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	11.73	□□□□□ -0.53	not detected
SEC11	YIR022W	ART10	P18634	518 aa	Known RBP	11.73	□□□□□ -0.53
SEC11	YIR022W	POL4	P25615	582 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	CYS4	P32582	507 aa	Known RBP	11.73	□□□□□ -0.53
SEC11	YIR022W	YBR241C	P38142	488 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	RIM11	P38615	370 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	BRL1	P38770	471 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	SEO1	P39709	593 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	IMA5	P40884	581 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	YJL055W	P47044	245 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	ORC3	P54790	616 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	TIF35	Q04067	274 aa	Known RBP	11.73	□□□□□ -0.53
SEC11	YIR022W	SYT1	Q06836	1226 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	YOL019W	Q08157	551 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	YLL054C	Q12244	843 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	CTF3	Q12748	733 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	YDR461C-A	Q2V2P7	80 aa		11.73	□□□□□ -0.53
SEC11	YIR022W	TRP3	P00937	484 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	COX4	P04037	155 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	RPB4	P20433	221 aa	Predicted RBP	11.72	□□□□□ -0.53
SEC11	YIR022W	MRPL32	P25348	183 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	PHO91	P27514	894 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	VMA6	P32366	345 aa	Known RBP	11.72	□□□□□ -0.53
SEC11	YIR022W	SHE3	P38272	425 aa	Known RBP	11.72	□□□□□ -0.53
SEC11	YIR022W	PEX18	P38855	283 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	AVT6	P40074	448 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	ATM1	P40416	690 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	YRB2	P40517	327 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	CNN1	P43618	361 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	DIA3	P52290	468 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	ESF2	P53743	316 aa	Known RBP	11.72	□□□□□ -0.53
SEC11	YIR022W	KTR6	P54070	446 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	ADE12	P80210	433 aa	Known RBP	11.72	□□□□□ -0.53
SEC11	YIR022W	ECM9	Q02202	377 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	MMT1	Q03218	510 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	RCF1	Q03713	159 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	SPO71	Q03868	1245 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	TSR2	Q06672	205 aa	Known RBP	11.72	□□□□□ -0.53
SEC11	YIR022W	YDL121C	Q07541	149 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	SLD7	Q08457	257 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	RSA1	Q08932	381 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	MDY2	Q12285	212 aa		11.72	□□□□□ -0.53
SEC11	YIR022W	RHO1	P06780	209 aa	Known RBP	11.71	□□□□□ -0.53
SEC11	YIR022W	MIS1	P09440	975 aa	Known RBP	11.71	□□□□□ -0.53
SEC11	YIR022W	GLN3	P18494	730 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	VPS3	P23643	1011 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	ITR2	P30606	609 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	PAH1	P32567	862 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	RTG2	P32608	588 aa	Known RBP	11.71	□□□□□ -0.53
SEC11	YIR022W	AIM26	P32858	118 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	TYE7	P33122	291 aa	Predicted RBP	11.71	□□□□□ -0.53
SEC11	YIR022W	YEL028W	P39989	153 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	YEN1	P40028	759 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	VMA13	P41807	478 aa	Known RBP	11.71	□□□□□ -0.53
SEC11	YIR022W	RPS10B	P46784	105 aa	Known RBP	11.71	□□□□□ -0.53
SEC11	YIR022W	GUF1	P46943	645 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	MPS3	P47069	682 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	GTR2	P53290	341 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	FAP1	P53971	965 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	MET14	Q02196	202 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	ENT5	Q03769	411 aa	Known RBP	11.71	□□□□□ -0.53
SEC11	YIR022W	GPI17	Q04080	534 aa		11.71	□□□□□ -0.53
SEC11	YIR022W	BUD20	Q08004	166 aa	Predicted RBP	11.71	□□□□□ -0.53
SEC11	YIR022W	RPS10A	Q08745	105 aa	Predicted RBP	11.71	□□□□□ -0.53
SEC11	YIR022W	THP2	O13539	261 aa	Known RBP	11.7	□□□□□ -0.54
SEC11	YIR022W	HEM2	P05373	342 aa		11.7	□□□□□ -0.54
SEC11	YIR022W	APE1	P14904	514 aa		11.7	□□□□□ -0.54
SEC11	YIR022W	TEC1	P18412	486 aa		11.7	□□□□□ -0.54
SEC11	YIR022W	DBR1	P24309	405 aa	Known RBP	11.7	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms