RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W REC107P21651 314 aa11.25□□□□□ -0.61
SIM1YIL123W SEC15P22224 910 aa11.25□□□□□ -0.61
SIM1YIL123W YCR090CP25654 182 aaKnown RBP11.25□□□□□ -0.61
SIM1YIL123W AEP1P32493 518 aa11.25□□□□□ -0.61
SIM1YIL123W CTF13P35203 478 aa11.25□□□□□ -0.61
SIM1YIL123W TFA2P36145 328 aa11.25□□□□□ -0.61
SIM1YIL123W VRP1P37370 817 aa11.25□□□□□ -0.61
SIM1YIL123W MSC7P38694 644 aa11.25□□□□□ -0.61
SIM1YIL123W SHU2P38957 223 aa11.25□□□□□ -0.61
SIM1YIL123W AMA1P50082 593 aa11.25□□□□□ -0.61
SIM1YIL123W SPO71Q03868 1245 aa11.25□□□□□ -0.61
SIM1YIL123W YDR131CQ03899 556 aa11.25□□□□□ -0.61
SIM1YIL123W HDA3Q06623 655 aa11.25□□□□□ -0.61
SIM1YIL123W YOL019WQ08157 551 aa11.25□□□□□ -0.61
SIM1YIL123W SNX3Q08826 162 aaKnown RBP11.25□□□□□ -0.61
SIM1YIL123W YPR202WQ08993 238 aa11.25□□□□□ -0.61
SIM1YIL123W CAR1P00812 333 aaKnown RBP11.24□□□□□ -0.61
SIM1YIL123W ENO1P00924 437 aaKnown RBP11.24□□□□□ -0.61
SIM1YIL123W HSF1P10961 833 aa11.24□□□□□ -0.61
SIM1YIL123W ABF1P14164 731 aa11.24□□□□□ -0.61
SIM1YIL123W IDI1P15496 288 aa11.24□□□□□ -0.61
SIM1YIL123W MRPL8P22353 238 aa11.24□□□□□ -0.61
SIM1YIL123W SPS22P25380 463 aa11.24□□□□□ -0.61
SIM1YIL123W DCC1P25559 380 aa11.24□□□□□ -0.61
SIM1YIL123W GUT2P32191 649 aa11.24□□□□□ -0.61
SIM1YIL123W DGR2P32330 852 aa11.24□□□□□ -0.61
SIM1YIL123W MUP3P38734 546 aa11.24□□□□□ -0.61
SIM1YIL123W JEM1P40358 645 aa11.24□□□□□ -0.61
SIM1YIL123W NUP84P52891 726 aa11.24□□□□□ -0.61
SIM1YIL123W MCM6P53091 1017 aaKnown RBP11.24□□□□□ -0.61
SIM1YIL123W YTP1P53584 459 aa11.24□□□□□ -0.61
SIM1YIL123W IPI3P53877 555 aa11.24□□□□□ -0.61
SIM1YIL123W SLM2P53955 656 aa11.24□□□□□ -0.61
SIM1YIL123W TRE2Q08693 809 aa11.24□□□□□ -0.61
SIM1YIL123W NUS1Q12063 375 aa11.24□□□□□ -0.61
SIM1YIL123W AMD1P15274 810 aaKnown RBP11.23□□□□□ -0.61
SIM1YIL123W PEX1P24004 1043 aa11.23□□□□□ -0.61
SIM1YIL123W GFD2P25370 566 aaKnown RBP11.23□□□□□ -0.61
SIM1YIL123W SRP72P38688 640 aaKnown RBP11.23□□□□□ -0.61
SIM1YIL123W TRM5P38793 499 aa11.23□□□□□ -0.61
SIM1YIL123W YHR131CP38835 850 aa11.23□□□□□ -0.61
SIM1YIL123W GCD14P46959 383 aaPredicted RBP11.23□□□□□ -0.61
SIM1YIL123W BOL2P53082 120 aa11.23□□□□□ -0.61
SIM1YIL123W CUS2P53830 285 aaPredicted RBP11.23□□□□□ -0.61
SIM1YIL123W LSM3P57743 89 aaKnown RBP11.23□□□□□ -0.61
SIM1YIL123W YPL014WQ02606 381 aa11.23□□□□□ -0.61
SIM1YIL123W PIB1Q06651 286 aa11.23□□□□□ -0.61
SIM1YIL123W NDD1Q08887 554 aa11.23□□□□□ -0.61
SIM1YIL123W PEX11Q12462 236 aa11.23□□□□□ -0.61
SIM1YIL123W YPL247CQ12523 523 aa11.23□□□□□ -0.61
SIM1YIL123W SCH9P11792 824 aaKnown RBP11.22□□□□□ -0.61
SIM1YIL123W HMG2P12684 1045 aa11.22□□□□□ -0.61
SIM1YIL123W NMT1P14743 455 aa11.22□□□□□ -0.61
SIM1YIL123W RPB4P20433 221 aaPredicted RBP11.22□□□□□ -0.61
SIM1YIL123W PPH22P23595 377 aa11.22□□□□□ -0.61
SIM1YIL123W YCR099CP25657 155 aa11.22□□□□□ -0.61
SIM1YIL123W SIN4P32259 974 aa11.22□□□□□ -0.61
SIM1YIL123W SAF1P38352 637 aa11.22□□□□□ -0.61
SIM1YIL123W ACO2P39533 789 aa11.22□□□□□ -0.61
SIM1YIL123W PRM2P40534 656 aa11.22□□□□□ -0.61
SIM1YIL123W CCT7P42943 550 aaKnown RBP11.22□□□□□ -0.61
SIM1YIL123W PET130P47065 347 aa11.22□□□□□ -0.61
SIM1YIL123W COG1P53079 417 aa11.22□□□□□ -0.61
SIM1YIL123W TOF2Q02208 771 aa11.22□□□□□ -0.61
SIM1YIL123W NHP10Q03435 203 aa11.22□□□□□ -0.61
SIM1YIL123W YMR206WQ03695 313 aa11.22□□□□□ -0.61
SIM1YIL123W YDR132CQ03900 495 aa11.22□□□□□ -0.61
SIM1YIL123W GSF2Q04697 403 aaKnown RBP11.22□□□□□ -0.61
SIM1YIL123W BLS1Q06071 122 aa11.22□□□□□ -0.61
SIM1YIL123W MCP2Q06567 569 aa11.22□□□□□ -0.61
SIM1YIL123W UBX3Q12229 455 aa11.22□□□□□ -0.61
SIM1YIL123W SST2P11972 698 aaKnown RBP11.21□□□□□ -0.61
SIM1YIL123W RBK1P25332 333 aa11.21□□□□□ -0.61
SIM1YIL123W EMC1P25574 760 aa11.21□□□□□ -0.61
SIM1YIL123W EAP1P36041 632 aaKnown RBP11.21□□□□□ -0.61
SIM1YIL123W ERP6P53198 216 aa11.21□□□□□ -0.61
SIM1YIL123W RMI1Q02685 241 aa11.21□□□□□ -0.61
SIM1YIL123W ACL4Q03771 387 aa11.21□□□□□ -0.61
SIM1YIL123W NUT2Q06213 157 aa11.21□□□□□ -0.61
SIM1YIL123W YLR046CQ12253 270 aa11.21□□□□□ -0.61
SIM1YIL123W TY4A-HQ6Q5P6 413 aa11.21□□□□□ -0.61
SIM1YIL123W URK1P27515 501 aa11.2□□□□□ -0.62
SIM1YIL123W MF(ALPHA)2P32435 120 aa11.2□□□□□ -0.62
SIM1YIL123W PTM1P32857 523 aa11.2□□□□□ -0.62
SIM1YIL123W ALY1P36117 915 aa11.2□□□□□ -0.62
SIM1YIL123W LDB7P38210 180 aa11.2□□□□□ -0.62
SIM1YIL123W GND1P38720 489 aaKnown RBP11.2□□□□□ -0.62
SIM1YIL123W ARN1P38731 627 aa11.2□□□□□ -0.62
SIM1YIL123W EXO1P39875 702 aa11.2□□□□□ -0.62
SIM1YIL123W UBP7P40453 1071 aa11.2□□□□□ -0.62
SIM1YIL123W RPL34BP40525 121 aaKnown RBP11.2□□□□□ -0.62
SIM1YIL123W SIP4P46954 829 aa11.2□□□□□ -0.62
SIM1YIL123W YDR476CQ03362 224 aa11.2□□□□□ -0.62
SIM1YIL123W YET2Q04210 160 aa11.2□□□□□ -0.62
SIM1YIL123W SPO20Q04359 397 aa11.2□□□□□ -0.62
SIM1YIL123W HFD1Q04458 532 aa11.2□□□□□ -0.62
SIM1YIL123W GLO2Q05584 274 aa11.2□□□□□ -0.62
SIM1YIL123W FAR10Q06001 478 aa11.2□□□□□ -0.62
SIM1YIL123W JIP5Q06214 492 aaPredicted RBP11.2□□□□□ -0.62
SIM1YIL123W CRN1Q06440 651 aa11.2□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms