RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	KSP1	P38691	1029 aa	Known RBP	4.16	□□□□□ -1.74
SLX8	YER116C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SLX8	YER116C	GIP4	P39732	760 aa		4.16	□□□□□ -1.74
SLX8	YER116C	ASG1	P40467	964 aa		4.16	□□□□□ -1.74
SLX8	YER116C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SLX8	YER116C	IRC24	P40580	263 aa		4.16	□□□□□ -1.74
SLX8	YER116C	YJL045W	P47052	634 aa		4.16	□□□□□ -1.74
SLX8	YER116C	AAD10	P47182	288 aa		4.16	□□□□□ -1.74
SLX8	YER116C	YGL242C	P53066	181 aa		4.16	□□□□□ -1.74
SLX8	YER116C	PEF1	P53238	335 aa		4.16	□□□□□ -1.74
SLX8	YER116C	CSL4	P53859	292 aa	Predicted RBP	4.16	□□□□□ -1.74
SLX8	YER116C	RCM1	P53972	490 aa		4.16	□□□□□ -1.74
SLX8	YER116C	RPA49	Q01080	415 aa	Predicted RBP	4.16	□□□□□ -1.74
SLX8	YER116C	YKR011C	Q02209	353 aa		4.16	□□□□□ -1.74
SLX8	YER116C	PPM1	Q04081	328 aa		4.16	□□□□□ -1.74
SLX8	YER116C	PEX19	Q07418	342 aa		4.16	□□□□□ -1.74
SLX8	YER116C	HBT1	Q07653	1046 aa	Known RBP	4.16	□□□□□ -1.74
SLX8	YER116C	TMA16	Q08687	178 aa		4.16	□□□□□ -1.74
SLX8	YER116C	NUS1	Q12063	375 aa		4.16	□□□□□ -1.74
SLX8	YER116C	SWT1	Q12104	458 aa		4.16	□□□□□ -1.74
SLX8	YER116C	LEU9	Q12166	604 aa	Known RBP	4.16	□□□□□ -1.74
SLX8	YER116C	SUL2	Q12325	893 aa		4.16	□□□□□ -1.74
SLX8	YER116C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
SLX8	YER116C	CAR2	P07991	424 aa	Known RBP	4.15	□□□□□ -1.75
SLX8	YER116C	PET122	P10355	254 aa		4.15	□□□□□ -1.75
SLX8	YER116C	TAL1	P15019	335 aa	Known RBP	4.15	□□□□□ -1.75
SLX8	YER116C	CAD1	P24813	409 aa	Known RBP	4.15	□□□□□ -1.75
SLX8	YER116C	PRD1	P25375	712 aa		4.15	□□□□□ -1.75
SLX8	YER116C	CRM1	P30822	1084 aa	Known RBP	4.15	□□□□□ -1.75
SLX8	YER116C	COT1	P32798	439 aa		4.15	□□□□□ -1.75
SLX8	YER116C	TYE7	P33122	291 aa	Predicted RBP	4.15	□□□□□ -1.75
SLX8	YER116C	CST26	P38226	397 aa		4.15	□□□□□ -1.75
SLX8	YER116C	SAF1	P38352	637 aa		4.15	□□□□□ -1.75
SLX8	YER116C	MIP6	P38760	659 aa	Known RBP	4.15	□□□□□ -1.75
SLX8	YER116C	ERC1	P38767	581 aa		4.15	□□□□□ -1.75
SLX8	YER116C	GIP2	P40036	548 aa		4.15	□□□□□ -1.75
SLX8	YER116C	INA22	P40576	216 aa		4.15	□□□□□ -1.75
SLX8	YER116C	VMA13	P41807	478 aa	Known RBP	4.15	□□□□□ -1.75
SLX8	YER116C	MAF1	P41910	395 aa		4.15	□□□□□ -1.75
SLX8	YER116C	GSM1	P42950	618 aa		4.15	□□□□□ -1.75
SLX8	YER116C	TAF4	P50105	388 aa		4.15	□□□□□ -1.75
SLX8	YER116C	MLC1	P53141	149 aa		4.15	□□□□□ -1.75
SLX8	YER116C	YGR066C	P53242	292 aa		4.15	□□□□□ -1.75
SLX8	YER116C	RRP46	P53256	223 aa	Predicted RBP	4.15	□□□□□ -1.75
SLX8	YER116C	NGL2	Q03264	515 aa	Known RBP	4.15	□□□□□ -1.75
SLX8	YER116C	RCR2	Q03446	210 aa	Known RBP	4.15	□□□□□ -1.75
SLX8	YER116C	YML037C	Q03703	340 aa		4.15	□□□□□ -1.75
SLX8	YER116C	MSC3	Q05812	728 aa		4.15	□□□□□ -1.75
SLX8	YER116C	STP3	Q05937	343 aa		4.15	□□□□□ -1.75
SLX8	YER116C	ECM7	Q06200	448 aa		4.15	□□□□□ -1.75
SLX8	YER116C	TSR1	Q07381	788 aa	Known RBP	4.15	□□□□□ -1.75
SLX8	YER116C	GAS5	Q08193	484 aa		4.15	□□□□□ -1.75
SLX8	YER116C	BUD7	Q08754	746 aa		4.15	□□□□□ -1.75
SLX8	YER116C	ATG29	Q12092	213 aa		4.15	□□□□□ -1.75
SLX8	YER116C	YLL054C	Q12244	843 aa		4.15	□□□□□ -1.75
SLX8	YER116C	YDR061W	Q12298	539 aa		4.15	□□□□□ -1.75
SLX8	YER116C	RAD61	Q99359	647 aa		4.15	□□□□□ -1.75
SLX8	YER116C	PET111	P08468	800 aa		4.14	□□□□□ -1.75
SLX8	YER116C	PRB1	P09232	635 aa		4.14	□□□□□ -1.75
SLX8	YER116C	LPD1	P09624	499 aa	Known RBP	4.14	□□□□□ -1.75
SLX8	YER116C	CAF20	P12962	161 aa	Known RBP	4.14	□□□□□ -1.75
SLX8	YER116C	RPL3	P14126	387 aa	Known RBP	4.14	□□□□□ -1.75
SLX8	YER116C	MSS116	P15424	664 aa	Known RBP	4.14	□□□□□ -1.75
SLX8	YER116C	IME1	P21190	360 aa		4.14	□□□□□ -1.75
SLX8	YER116C	EFB1	P32471	206 aa	Known RBP	4.14	□□□□□ -1.75
SLX8	YER116C	RPT5	P33297	434 aa	Known RBP	4.14	□□□□□ -1.75
SLX8	YER116C	MSN4	P33749	630 aa		4.14	□□□□□ -1.75
SLX8	YER116C	PMT1	P33775	817 aa		4.14	□□□□□ -1.75
SLX8	YER116C	YBL055C	P34220	418 aa	Predicted RBP	4.14	□□□□□ -1.75
SLX8	YER116C	PHO11	P35842	467 aa		4.14	□□□□□ -1.75
SLX8	YER116C	MRPL37	P36532	105 aa		4.14	□□□□□ -1.75
SLX8	YER116C	THI2	P38141	450 aa		4.14	□□□□□ -1.75
SLX8	YER116C	CDS1	P38221	457 aa		4.14	□□□□□ -1.75
SLX8	YER116C	NTC20	P38302	140 aa	Predicted RBP	4.14	□□□□□ -1.75
SLX8	YER116C	PHO12	P38693	467 aa		4.14	□□□□□ -1.75
SLX8	YER116C	PIH1	P38768	344 aa		4.14	□□□□□ -1.75
SLX8	YER116C	ZRG8	P40021	1076 aa		4.14	□□□□□ -1.75
SLX8	YER116C	VFA1	P40080	203 aa		4.14	□□□□□ -1.75
SLX8	YER116C	AIM20	P40451	204 aa		4.14	□□□□□ -1.75
SLX8	YER116C	YFR018C	P43599	363 aa		4.14	□□□□□ -1.75
SLX8	YER116C	TAH11	P47112	604 aa		4.14	□□□□□ -1.75
SLX8	YER116C	TRF5	P48561	642 aa	Known RBP	4.14	□□□□□ -1.75
SLX8	YER116C	CGR1	P53188	120 aa		4.14	□□□□□ -1.75
SLX8	YER116C	SOK2	P53438	785 aa	Predicted RBP	4.14	□□□□□ -1.75
SLX8	YER116C	DUS1	P53759	423 aa	Known RBP	4.14	□□□□□ -1.75
SLX8	YER116C	INN1	P53901	409 aa		4.14	□□□□□ -1.75
SLX8	YER116C	YNL143C	P53908	130 aa		4.14	□□□□□ -1.75
SLX8	YER116C	YNL050C	P53952	270 aa		4.14	□□□□□ -1.75
SLX8	YER116C	KAP120	Q02932	1032 aa		4.14	□□□□□ -1.75
SLX8	YER116C	VPS64	Q03944	604 aa		4.14	□□□□□ -1.75
SLX8	YER116C	SOV1	Q04748	898 aa		4.14	□□□□□ -1.75
SLX8	YER116C	VAM6	Q07468	1049 aa		4.14	□□□□□ -1.75
SLX8	YER116C	YEH1	Q07804	573 aa		4.14	□□□□□ -1.75
SLX8	YER116C	HRK1	Q08732	759 aa	Known RBP	4.14	□□□□□ -1.75
SLX8	YER116C	OSW2	Q12202	724 aa		4.14	□□□□□ -1.75
SLX8	YER116C	RBD2	Q12270	262 aa		4.14	□□□□□ -1.75
SLX8	YER116C	YLR122C	Q12312	125 aa		4.14	□□□□□ -1.75
SLX8	YER116C	TY1A-NL1	Q12391	440 aa	Known RBP	4.14	□□□□□ -1.75
SLX8	YER116C	ERG27	Q12452	347 aa	Known RBP	4.14	□□□□□ -1.75
SLX8	YER116C	SPE4	Q12455	300 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms