RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	YJR124C	P47159	448 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	ATH1	P48016	1211 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	TAF6	P53040	516 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	UBX4	P54730	416 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	SPP2	Q02521	185 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	RNY1	Q02933	434 aa	Known RBP	7.29	□□□□□ -1.24
SKP1	YDR328C	GSF2	Q04697	403 aa	Known RBP	7.29	□□□□□ -1.24
SKP1	YDR328C	LCB5	Q06147	687 aa	Known RBP	7.29	□□□□□ -1.24
SKP1	YDR328C	STE2	D6VTK4	431 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	YMR085W	P0CF18	432 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	NSP1	P14907	823 aa	Known RBP	7.28	□□□□□ -1.24
SKP1	YDR328C	MRM1	P25270	412 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	PUP3	P25451	205 aa	Known RBP	7.28	□□□□□ -1.24
SKP1	YDR328C	AAD3	P25612	363 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	PYC2	P32327	1180 aa	Known RBP	7.28	□□□□□ -1.24
SKP1	YDR328C	PHA2	P32452	334 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	NIP1	P32497	812 aa	Known RBP	7.28	□□□□□ -1.24
SKP1	YDR328C	STE13	P33894	931 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	PXA2	P34230	853 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	SLD2	P34252	453 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	IRS4	P36115	615 aa	Known RBP	7.28	□□□□□ -1.24
SKP1	YDR328C	MAK5	P38112	773 aa	Predicted RBP	7.28	□□□□□ -1.24
SKP1	YDR328C	LDB7	P38210	180 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	YSW1	P38280	609 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	SRP72	P38688	640 aa	Known RBP	7.28	□□□□□ -1.24
SKP1	YDR328C	ACO2	P39533	789 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	HAT2	P39984	401 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	HOS4	P40480	1083 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	MNT2	P53059	558 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	YDR131C	Q03899	556 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	RPN9	Q04062	393 aa	Known RBP	7.28	□□□□□ -1.24
SKP1	YDR328C	NUT2	Q06213	157 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	NSE1	Q07913	336 aa		7.28	□□□□□ -1.24
SKP1	YDR328C	RPS9A	O13516	197 aa	Known RBP	7.27	□□□□□ -1.25
SKP1	YDR328C	MSF1	P08425	469 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	SEC63	P14906	663 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	TRX2	P22803	104 aa	Known RBP	7.27	□□□□□ -1.25
SKP1	YDR328C	YCR099C	P25657	155 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	HSM3	P38348	480 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	PHO89	P38361	574 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	RPH1	P39956	796 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	MRX1	P40050	688 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	ALG8	P40351	577 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	GTS1	P40956	396 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	SET2	P46995	733 aa	Known RBP	7.27	□□□□□ -1.25
SKP1	YDR328C	PET130	P47065	347 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	EMC4	P53073	190 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	YGL140C	P53120	1219 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	SPC105	P53148	917 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	YNL143C	P53908	130 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	SHE9	Q04172	456 aa		7.27	□□□□□ -1.25
SKP1	YDR328C	NOB1	Q08444	459 aa	Known RBP	7.27	□□□□□ -1.25
SKP1	YDR328C	HRK1	Q08732	759 aa	Known RBP	7.27	□□□□□ -1.25
SKP1	YDR328C	ABF1	P14164	731 aa		7.26	□□□□□ -1.25
SKP1	YDR328C	PHO3	P24031	467 aa		7.26	□□□□□ -1.25
SKP1	YDR328C	BRF1	P29056	596 aa		7.26	□□□□□ -1.25
SKP1	YDR328C	MRPL9	P31334	269 aa		7.26	□□□□□ -1.25
SKP1	YDR328C	YSC84	P32793	468 aa		7.26	□□□□□ -1.25
SKP1	YDR328C	LRG1	P35688	1017 aa		7.26	□□□□□ -1.25
SKP1	YDR328C	GDT1	P38301	280 aa	Predicted RBP	7.26	□□□□□ -1.25
SKP1	YDR328C	MUP3	P38734	546 aa		7.26	□□□□□ -1.25
SKP1	YDR328C	REF2	P42073	533 aa	Predicted RBP	7.26	□□□□□ -1.25
SKP1	YDR328C	LSB3	P43603	459 aa	Known RBP	7.26	□□□□□ -1.25
SKP1	YDR328C	FAR3	P46671	204 aa		7.26	□□□□□ -1.25
SKP1	YDR328C	RSM7	P47150	247 aa		7.26	□□□□□ -1.25
SKP1	YDR328C	IST1	P53843	298 aa	Predicted RBP	7.26	□□□□□ -1.25
SKP1	YDR328C	VAC7	P53950	1165 aa		7.26	□□□□□ -1.25
SKP1	YDR328C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	7.26	□□□□□ -1.25	not detected
SKP1	YDR328C	CSN9	Q03981	162 aa		7.26	□□□□□ -1.25
SKP1	YDR328C	NUS1	Q12063	375 aa		7.26	□□□□□ -1.25
SKP1	YDR328C	CHS5	Q12114	671 aa	Known RBP	7.26	□□□□□ -1.25
SKP1	YDR328C	NOT5	Q12514	560 aa	Predicted RBP	7.26	□□□□□ -1.25
SKP1	YDR328C	YMR084W	A2P2R3	262 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	BAS1	P22035	811 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	MF(ALPHA)2	P32435	120 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	DCW1	P36091	449 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	VRP1	P37370	817 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	YDR089W	P38966	869 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	TIM17	P39515	158 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	IME4	P41833	600 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	ARC1	P46672	376 aa	Known RBP	7.25	□□□□□ -1.25
SKP1	YDR328C	MAD3	P47074	515 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	TDA7	P53882	636 aa	Predicted RBP	7.25	□□□□□ -1.25
SKP1	YDR328C	SUB1	P54000	292 aa	Known RBP	7.25	□□□□□ -1.25
SKP1	YDR328C	PEX13	P80667	386 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	VPS16	Q03308	798 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	YMR155W	Q03795	547 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	PPN1	Q04119	674 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	IRC10	Q08118	586 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	TMA46	Q12000	345 aa	Known RBP	7.25	□□□□□ -1.25
SKP1	YDR328C	APC9	Q12107	265 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	MRH1	Q12117	320 aa	Predicted RBP	7.25	□□□□□ -1.25
SKP1	YDR328C	FAB1	P34756	2278 aa		7.25	□□□□□ -1.25
SKP1	YDR328C	SPS1	P08458	490 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	MPH2	P0CD99	609 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	GAL11	P19659	1081 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	UBA1	P22515	1024 aa	Known RBP	7.24	□□□□□ -1.25
SKP1	YDR328C	SPS19	P32573	292 aa	Known RBP	7.24	□□□□□ -1.25
SKP1	YDR328C	PMT1	P33775	817 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	TFC3	P34111	1160 aa		7.24	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms