RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C CRN1Q06440 651 aa1.97□□□□□ -2.09
SWI5YDR146C GEP3Q08622 556 aa1.97□□□□□ -2.09
SWI5YDR146C DPB3P27344 201 aa1.97□□□□□ -2.09
SWI5YDR146C SLC1P33333 303 aa1.97□□□□□ -2.09
SWI5YDR146C TFC3P34111 1160 aa1.97□□□□□ -2.09
SWI5YDR146C PXL1P36166 706 aa1.97□□□□□ -2.09
SWI5YDR146C LEU5P38702 357 aa1.97□□□□□ -2.09
SWI5YDR146C ECM10P39987 644 aa1.97□□□□□ -2.09
SWI5YDR146C KAP123P40069 1113 aaKnown RBP1.97□□□□□ -2.09
SWI5YDR146C RIC1P40395 1056 aa1.97□□□□□ -2.09
SWI5YDR146C PFK26P40433 827 aaKnown RBP1.97□□□□□ -2.09
SWI5YDR146C DPH1P40487 425 aaKnown RBP1.97□□□□□ -2.09
SWI5YDR146C MNT3P40549 630 aa1.97□□□□□ -2.09
SWI5YDR146C CTK2P46962 323 aa1.97□□□□□ -2.09
SWI5YDR146C IML2P47031 731 aa1.97□□□□□ -2.09
SWI5YDR146C MEP3P53390 489 aa1.97□□□□□ -2.09
SWI5YDR146C INN1P53901 409 aa1.97□□□□□ -2.09
SWI5YDR146C ASI1P54074 624 aa1.97□□□□□ -2.09
SWI5YDR146C MAK10Q02197 733 aa1.97□□□□□ -2.09
SWI5YDR146C MUB1Q03162 620 aa1.97□□□□□ -2.09
SWI5YDR146C SNO4Q04902 237 aa1.97□□□□□ -2.09
SWI5YDR146C PDR8Q06149 701 aa1.97□□□□□ -2.09
SWI5YDR146C MCH4Q08268 501 aa1.97□□□□□ -2.09
SWI5YDR146C HSP33Q08914 237 aaKnown RBP1.97□□□□□ -2.09
SWI5YDR146C HSP32Q08992 237 aa1.97□□□□□ -2.09
SWI5YDR146C ATG9Q12142 997 aa1.97□□□□□ -2.09
SWI5YDR146C YER145C-AA0A023PYF4 145 aa1.96□□□□□ -2.1
SWI5YDR146C CLB2P24869 491 aa1.96□□□□□ -2.1
SWI5YDR146C PTP1P25044 335 aa1.96□□□□□ -2.1
SWI5YDR146C RPT3P33298 428 aaKnown RBP1.96□□□□□ -2.1
SWI5YDR146C YPL068CQ02749 293 aa1.96□□□□□ -2.1
SWI5YDR146C INA17Q02888 182 aa1.96□□□□□ -2.1
SWI5YDR146C RSM28Q03430 361 aa1.96□□□□□ -2.1
SWI5YDR146C OPY2Q06810 360 aa1.96□□□□□ -2.1
SWI5YDR146C CIR2Q08822 631 aa1.96□□□□□ -2.1
SWI5YDR146C RRI1Q12468 440 aa1.96□□□□□ -2.1
SWI5YDR146C YOR019WQ99248 730 aa1.96□□□□□ -2.1
SWI5YDR146C MRP2P10663 115 aaPredicted RBP1.96□□□□□ -2.1
SWI5YDR146C KRS1P15180 591 aaKnown RBP1.96□□□□□ -2.1
SWI5YDR146C CNS1P33313 385 aa1.96□□□□□ -2.1
SWI5YDR146C ASK1P35734 292 aa1.96□□□□□ -2.1
SWI5YDR146C ARP1P38696 384 aa1.96□□□□□ -2.1
SWI5YDR146C UME6P39001 836 aa1.96□□□□□ -2.1
SWI5YDR146C SLZ1P40167 298 aa1.96□□□□□ -2.1
SWI5YDR146C SEC24P40482 926 aaKnown RBP1.96□□□□□ -2.1
SWI5YDR146C PCI8P40512 444 aa1.96□□□□□ -2.1
SWI5YDR146C AAD10P47182 288 aa1.96□□□□□ -2.1
SWI5YDR146C ZDS2P54786 942 aa1.96□□□□□ -2.1
SWI5YDR146C AFT2Q08957 416 aa1.96□□□□□ -2.1
SWI5YDR146C RGT2Q12300 763 aa1.96□□□□□ -2.1
SWI5YDR146C YPR089WO13585 888 aa1.95□□□□□ -2.1
SWI5YDR146C RPL19AP0CX82 189 aaKnown RBP1.95□□□□□ -2.1
SWI5YDR146C RPL19BP0CX83 189 aaPredicted RBP1.95□□□□□ -2.1
SWI5YDR146C RER1P25560 188 aa1.95□□□□□ -2.1
SWI5YDR146C MSS51P32335 436 aa1.95□□□□□ -2.1
SWI5YDR146C SSH4P32343 579 aa1.95□□□□□ -2.1
SWI5YDR146C MCM10P32354 571 aa1.95□□□□□ -2.1
SWI5YDR146C TMT1P32643 299 aa1.95□□□□□ -2.1
SWI5YDR146C YMR124WP39523 943 aaKnown RBP1.95□□□□□ -2.1
SWI5YDR146C JHD1P40034 492 aa1.95□□□□□ -2.1
SWI5YDR146C IME4P41833 600 aa1.95□□□□□ -2.1
SWI5YDR146C YFR020WP43600 232 aa1.95□□□□□ -2.1
SWI5YDR146C YGL036WP53185 909 aaPredicted RBP1.95□□□□□ -2.1
SWI5YDR146C SWF1Q04629 336 aa1.95□□□□□ -2.1
SWI5YDR146C YOL159CQ08300 171 aa1.95□□□□□ -2.1
SWI5YDR146C FRE3Q08905 711 aa1.95□□□□□ -2.1
SWI5YDR146C YPL272CQ08984 517 aa1.95□□□□□ -2.1
SWI5YDR146C ERG27Q12452 347 aaKnown RBP1.95□□□□□ -2.1
SWI5YDR146C YLR302CO13544 120 aa1.94□□□□□ -2.1
SWI5YDR146C FUM1P08417 488 aaKnown RBP1.94□□□□□ -2.1
SWI5YDR146C SUI3P09064 285 aaKnown RBP1.94□□□□□ -2.1
SWI5YDR146C SOF1P33750 489 aaKnown RBP1.94□□□□□ -2.1
SWI5YDR146C LHS1P36016 881 aa1.94□□□□□ -2.1
SWI5YDR146C ALY1P36117 915 aa1.94□□□□□ -2.1
SWI5YDR146C SPC97P38863 823 aa1.94□□□□□ -2.1
SWI5YDR146C MRX1P40050 688 aa1.94□□□□□ -2.1
SWI5YDR146C YIL152WP40455 235 aa1.94□□□□□ -2.1
SWI5YDR146C PKP1P40530 394 aa1.94□□□□□ -2.1
SWI5YDR146C RTT109Q07794 436 aa1.94□□□□□ -2.1
SWI5YDR146C RIX7Q07844 837 aaKnown RBP1.94□□□□□ -2.1
SWI5YDR146C ATX2Q12067 313 aa1.94□□□□□ -2.1
SWI5YDR146C ICT1Q12385 394 aa1.94□□□□□ -2.1
SWI5YDR146C TOP1P04786 769 aa1.94□□□□□ -2.1
SWI5YDR146C YFL068WP0CX99 160 aa1.94□□□□□ -2.1
SWI5YDR146C YLL066W-AP0CY00 160 aa1.94□□□□□ -2.1
SWI5YDR146C YLL067W-AP0CY01 160 aa1.94□□□□□ -2.1
SWI5YDR146C PFK2P16862 959 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SWI5YDR146C KAR3P17119 729 aa1.94□□□□□ -2.1
SWI5YDR146C YCR006CP25350 157 aa1.94□□□□□ -2.1
SWI5YDR146C PDB1P32473 366 aaKnown RBP1.94□□□□□ -2.1
SWI5YDR146C SNU114P36048 1008 aaKnown RBP1.94□□□□□ -2.1
SWI5YDR146C GND1P38720 489 aaKnown RBP1.94□□□□□ -2.1
SWI5YDR146C YNG2P38806 282 aaKnown RBP1.94□□□□□ -2.1
SWI5YDR146C FLO5P38894 1075 aa1.94□□□□□ -2.1
SWI5YDR146C YJR061WP40355 935 aa1.94□□□□□ -2.1
SWI5YDR146C GAT1P43574 510 aa1.94□□□□□ -2.1
SWI5YDR146C ARC1P46672 376 aaKnown RBP1.94□□□□□ -2.1
SWI5YDR146C YPT11P48559 417 aa1.94□□□□□ -2.1
SWI5YDR146C LYS20P48570 428 aaKnown RBP1.94□□□□□ -2.1
SWI5YDR146C SCW4P53334 386 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms