RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	UBR2	Q07963	1872 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	ADE5,7	P07244	802 aa	Known RBP	4.03	□□□□□ -1.76
VMA1	YDL185W	GAL3	P13045	520 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	CHS2	P14180	963 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	DBF2	P22204	572 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	DAL2	P25335	343 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	SRB2	P34162	210 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	WHI3	P34761	661 aa	Known RBP	4.03	□□□□□ -1.76
VMA1	YDL185W	NAT2	P37293	288 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	YHR078W	P38799	552 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	SEC31	P38968	1273 aa	Known RBP	4.03	□□□□□ -1.76
VMA1	YDL185W	YEL020C	P39994	560 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	TMN3	P40071	706 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	YER186C	P40101	306 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	QDR2	P40474	542 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	GUF1	P46943	645 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	ISM1	P48526	1002 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	PEX21	P50091	288 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	GPI1	P53306	609 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	NIS1	P53939	407 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	DID2	P69771	204 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	EMG1	Q06287	252 aa	Known RBP	4.03	□□□□□ -1.76
VMA1	YDL185W	IWR1	Q07532	353 aa	Predicted RBP	4.03	□□□□□ -1.76
VMA1	YDL185W	RKM4	Q12504	494 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	TSC13	Q99190	310 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	MED11	Q99278	115 aa		4.03	□□□□□ -1.76
VMA1	YDL185W	IPP1	P00817	287 aa	Known RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	PHO4	P07270	312 aa	Known RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	SNF3	P10870	884 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	UGA1	P17649	471 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	MRPL33	P20084	86 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	NGG1	P32494	702 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	CYM1	P32898	989 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	SKG1	P36169	355 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	GRS1	P38088	690 aa	Known RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	YIL054W	P40524	105 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	ARC1	P46672	376 aa	Known RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	MDV1	P47025	714 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	RIM21	P48565	533 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	ARK1	P53974	638 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	RSC4	Q02206	625 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	DTD1	Q07648	150 aa	Known RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	AVL9	Q12500	764 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	CAR1	P00812	333 aa	Known RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	FBA1	P14540	359 aa	Known RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	STP2	P38704	541 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	MTW1	P39731	289 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	AVT2	P39981	480 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	APS3	P47064	194 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	ALT1	P52893	592 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	PUS2	P53167	370 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	TIM8	P57744	87 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	PFA5	Q03289	374 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	IVY1	Q04934	453 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
VMA1	YDL185W	HRK1	Q08732	759 aa	Known RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	SNU23	Q12368	194 aa	Predicted RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	ILV1	P00927	576 aa	Known RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	RPS17A	P02407	136 aa	Known RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	WHI2	P12611	486 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	RPS17B	P14127	136 aa	Known RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	ASF2	P32448	525 aa	Predicted RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	TMT1	P32643	299 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	SSO1	P32867	290 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	MDL2	P33311	773 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	UBP11	P36026	717 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	YRO2	P38079	344 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	YBR259W	P38338	688 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	YHK8	P38776	514 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	ICP55	P40051	511 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	YKE4	P40544	346 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	GLG2	P47011	380 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	SNF12	P53628	566 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	FOL1	P53848	824 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	YNL033W	P53964	284 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	YNL019C	P53975	284 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	RPA49	Q01080	415 aa	Predicted RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	CEF1	Q03654	590 aa	Predicted RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	HEL2	Q05580	639 aa	Known RBP	4.02	□□□□□ -1.77
VMA1	YDL185W	GMC2	Q06201	188 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	MUM3	Q08750	479 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	YPL260W	Q08977	551 aa		4.02	□□□□□ -1.77
VMA1	YDL185W	HKR1	P41809	1802 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	IMA3	P0CW40	589 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	IMA4	P0CW41	589 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	PCK1	P10963	549 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	NCP1	P16603	691 aa	Known RBP	4.01	□□□□□ -1.77
VMA1	YDL185W	RPB4	P20433	221 aa	Predicted RBP	4.01	□□□□□ -1.77
VMA1	YDL185W	RNR1	P21524	888 aa	Known RBP	4.01	□□□□□ -1.77
VMA1	YDL185W	VAC17	P25591	423 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	AEP1	P32493	518 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	BCS1	P32839	456 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	RGT1	P32862	1170 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	PTC1	P35182	281 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	YKL133C	P36066	463 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	ECM8	P38246	354 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	SHU2	P38957	223 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	SWD1	P39706	426 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	FLC2	P39719	783 aa		4.01	□□□□□ -1.77
VMA1	YDL185W	ARG2	P40360	574 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms