RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C CCR4P31384 837 aaKnown RBP5.83□□□□□ -1.48
MDH3YDL078C SSO1P32867 290 aa5.83□□□□□ -1.48
MDH3YDL078C RPC34P32910 317 aa5.83□□□□□ -1.48
MDH3YDL078C ARC19P33204 171 aaKnown RBP5.83□□□□□ -1.48
MDH3YDL078C STO1P34160 861 aaKnown RBP5.83□□□□□ -1.48
MDH3YDL078C MUD2P36084 527 aaKnown RBP5.83□□□□□ -1.48
MDH3YDL078C GEX2P36173 615 aa5.83□□□□□ -1.48
MDH3YDL078C YHL041WP38730 149 aa5.83□□□□□ -1.48
MDH3YDL078C CAJ1P39101 391 aa5.83□□□□□ -1.48
MDH3YDL078C FLC2P39719 783 aa5.83□□□□□ -1.48
MDH3YDL078C GIP4P39732 760 aa5.83□□□□□ -1.48
MDH3YDL078C YTA6P40328 754 aa5.83□□□□□ -1.48
MDH3YDL078C YJR061WP40355 935 aa5.83□□□□□ -1.48
MDH3YDL078C YIL001WP40560 513 aa5.83□□□□□ -1.48
MDH3YDL078C YML6P51998 286 aa5.83□□□□□ -1.48
MDH3YDL078C AIM14P53109 570 aa5.83□□□□□ -1.48
MDH3YDL078C YGR127WP53275 312 aa5.83□□□□□ -1.48
MDH3YDL078C ESF2P53743 316 aaKnown RBP5.83□□□□□ -1.48
MDH3YDL078C ORC3P54790 616 aa5.83□□□□□ -1.48
MDH3YDL078C SMA1Q02651 245 aa5.83□□□□□ -1.48
MDH3YDL078C SWC7Q06707 132 aa5.83□□□□□ -1.48
MDH3YDL078C VAM6Q07468 1049 aa5.83□□□□□ -1.48
MDH3YDL078C AAD15Q08361 143 aa5.83□□□□□ -1.48
MDH3YDL078C IES3Q12345 250 aa5.83□□□□□ -1.48
MDH3YDL078C PEX11Q12462 236 aa5.83□□□□□ -1.48
MDH3YDL078C MOD5P07884 428 aa5.82□□□□□ -1.48
MDH3YDL078C SEN2P16658 377 aa5.82□□□□□ -1.48
MDH3YDL078C MRPL8P22353 238 aa5.82□□□□□ -1.48
MDH3YDL078C HXT3P32466 567 aaKnown RBP5.82□□□□□ -1.48
MDH3YDL078C DIA4P38705 446 aaPredicted RBP5.82□□□□□ -1.48
MDH3YDL078C ASN2P49090 572 aaKnown RBP5.82□□□□□ -1.48
MDH3YDL078C PRM1P53835 661 aa5.82□□□□□ -1.48
MDH3YDL078C PIR1Q03178 341 aa5.82□□□□□ -1.48
MDH3YDL078C ENT5Q03769 411 aaKnown RBP5.82□□□□□ -1.48
MDH3YDL078C PLP1Q04004 230 aa5.82□□□□□ -1.48
MDH3YDL078C YKU80Q04437 629 aa5.82□□□□□ -1.48
MDH3YDL078C YDR278CQ05612 105 aa5.82□□□□□ -1.48
MDH3YDL078C YDR018CQ12185 396 aa5.82□□□□□ -1.48
MDH3YDL078C TOR1P35169 2470 aa5.82□□□□□ -1.48
MDH3YDL078C NUM1Q00402 2748 aa5.82□□□□□ -1.48
MDH3YDL078C DPB3P27344 201 aa5.81□□□□□ -1.48
MDH3YDL078C RPC19P28000 142 aaKnown RBP5.81□□□□□ -1.48
MDH3YDL078C YJU2P28320 278 aaPredicted RBP5.81□□□□□ -1.48
MDH3YDL078C MRS6P32864 603 aaKnown RBP5.81□□□□□ -1.48
MDH3YDL078C YRO2P38079 344 aa5.81□□□□□ -1.48
MDH3YDL078C OTU2P38747 307 aaKnown RBP5.81□□□□□ -1.48
MDH3YDL078C YHR078WP38799 552 aa5.81□□□□□ -1.48
MDH3YDL078C SAW1P39735 261 aa5.81□□□□□ -1.48
MDH3YDL078C UTP18P40362 594 aaPredicted RBP5.81□□□□□ -1.48
MDH3YDL078C ATM1P40416 690 aa5.81□□□□□ -1.48
MDH3YDL078C MND2P40577 368 aa5.81□□□□□ -1.48
MDH3YDL078C ROK1P45818 564 aaPredicted RBP5.81□□□□□ -1.48
MDH3YDL078C TRF5P48561 642 aaKnown RBP5.81□□□□□ -1.48
MDH3YDL078C APT1P49435 187 aaKnown RBP5.81□□□□□ -1.48
MDH3YDL078C MAL13P53338 473 aa5.81□□□□□ -1.48
MDH3YDL078C NRD1P53617 575 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
MDH3YDL078C YMR114CQ04471 368 aaKnown RBP5.81□□□□□ -1.48
MDH3YDL078C SSQ1Q05931 657 aaPredicted RBP5.81□□□□□ -1.48
MDH3YDL078C VAC14Q06708 880 aa5.81□□□□□ -1.48
MDH3YDL078C TRE2Q08693 809 aa5.81□□□□□ -1.48
MDH3YDL078C PGC1Q08959 321 aa5.81□□□□□ -1.48
MDH3YDL078C RIO1Q12196 484 aaKnown RBP5.81□□□□□ -1.48
MDH3YDL078C LSO2Q3E772 92 aaKnown RBP5.81□□□□□ -1.48
MDH3YDL078C UBR1P19812 1950 aa5.8□□□□□ -1.48
MDH3YDL078C SSC1P0CS90 654 aaKnown RBP5.8□□□□□ -1.48
MDH3YDL078C HAP4P14064 554 aa5.8□□□□□ -1.48
MDH3YDL078C SEC63P14906 663 aa5.8□□□□□ -1.48
MDH3YDL078C AAT2P23542 418 aaKnown RBP5.8□□□□□ -1.48
MDH3YDL078C MNE1P24720 663 aa5.8□□□□□ -1.48
MDH3YDL078C PAP1P29468 568 aaKnown RBP5.8□□□□□ -1.48
MDH3YDL078C YEL043WP32618 956 aa5.8□□□□□ -1.48
MDH3YDL078C NPL6P32832 435 aa5.8□□□□□ -1.48
MDH3YDL078C AIM26P32858 118 aa5.8□□□□□ -1.48
MDH3YDL078C NFU1P32860 256 aa5.8□□□□□ -1.48
MDH3YDL078C AMN1P38285 549 aaPredicted RBP5.8□□□□□ -1.48
MDH3YDL078C PPE1P38796 400 aa5.8□□□□□ -1.48
MDH3YDL078C BAT1P38891 393 aaKnown RBP5.8□□□□□ -1.48
MDH3YDL078C CCT4P39078 528 aaKnown RBP5.8□□□□□ -1.48
MDH3YDL078C YHB1P39676 399 aaKnown RBP5.8□□□□□ -1.48
MDH3YDL078C SWD1P39706 426 aa5.8□□□□□ -1.48
MDH3YDL078C SER33P40510 469 aa5.8□□□□□ -1.48
MDH3YDL078C PHB1P40961 287 aa5.8□□□□□ -1.48
MDH3YDL078C STB1P42845 420 aa5.8□□□□□ -1.48
MDH3YDL078C ATG36P46983 293 aa5.8□□□□□ -1.48
MDH3YDL078C YJR124CP47159 448 aa5.8□□□□□ -1.48
MDH3YDL078C HLJ1P48353 224 aa5.8□□□□□ -1.48
MDH3YDL078C ACS2P52910 683 aaKnown RBP5.8□□□□□ -1.48
MDH3YDL078C IPI3P53877 555 aa5.8□□□□□ -1.48
MDH3YDL078C MGR3Q04472 501 aa5.8□□□□□ -1.48
MDH3YDL078C YPR114WQ06107 315 aa5.8□□□□□ -1.48
MDH3YDL078C NRT1Q08485 598 aa5.8□□□□□ -1.48
MDH3YDL078C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
MDH3YDL078C FAP7Q12055 197 aaPredicted RBP5.8□□□□□ -1.48
MDH3YDL078C YLL056CQ12177 298 aa5.8□□□□□ -1.48
MDH3YDL078C ACC1Q00955 2233 aaKnown RBP5.79□□□□□ -1.48
MDH3YDL078C REP1P03871 373 aa5.79□□□□□ -1.48
MDH3YDL078C RAD10P06838 210 aa5.79□□□□□ -1.48
MDH3YDL078C ADH4P10127 382 aa5.79□□□□□ -1.48
MDH3YDL078C SCH9P11792 824 aaKnown RBP5.79□□□□□ -1.48
MDH3YDL078C RPO26P20435 155 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms