RNA–Protein interactions for RNA: YBR234C

ARC40, Transcript of Subunit of the ARP2/3 complex, yeast

Gene ARC40, Length 1,155 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARC40	YBR234C	RNY1	Q02933	434 aa	Known RBP	4.6	□□□□□ -1.67
ARC40	YBR234C	TVP15	Q03860	143 aa		4.6	□□□□□ -1.67
ARC40	YBR234C	SPC2	Q04969	178 aa		4.6	□□□□□ -1.67
ARC40	YBR234C	KAP95	Q06142	861 aa	Known RBP	4.6	□□□□□ -1.67
ARC40	YBR234C	ASA1	Q06822	443 aa		4.6	□□□□□ -1.67
ARC40	YBR234C	PEX15	Q08215	383 aa		4.6	□□□□□ -1.67
ARC40	YBR234C	RPN8	Q08723	338 aa	Known RBP	4.6	□□□□□ -1.67
ARC40	YBR234C	YIG1	Q08956	461 aa		4.6	□□□□□ -1.67
ARC40	YBR234C	HRT3	Q12347	344 aa		4.6	□□□□□ -1.67
ARC40	YBR234C	ATG11	Q12527	1178 aa		4.6	□□□□□ -1.67
ARC40	YBR234C	ECM3	Q99252	613 aa		4.6	□□□□□ -1.67
ARC40	YBR234C	HKR1	P41809	1802 aa		4.6	□□□□□ -1.67
ARC40	YBR234C	YER152C	P10356	443 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	RAD18	P10862	487 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	EST1	P17214	699 aa	Predicted RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	RPS5	P26783	225 aa	Known RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	ZIP1	P31111	875 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	HBS1	P32769	611 aa	Known RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	UTP11	P34247	250 aa	Predicted RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	DBP7	P36120	742 aa	Known RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	CTP1	P38152	299 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	ATG14	P38270	344 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	PCM1	P38628	557 aa	Known RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	ETP1	P38748	585 aa	Known RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	SEC31	P38968	1273 aa	Known RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	SSP120	P39931	234 aa	Known RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	NPP2	P39997	493 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	RPT2	P40327	437 aa	Known RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	UBP7	P40453	1071 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	YFL066C	P43538	392 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	SAD1	P43589	448 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	MTC3	P53077	123 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	YGR054W	P53235	642 aa	Known RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	ESF2	P53743	316 aa	Known RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	BIO5	P53744	561 aa	Known RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	GPD1	Q00055	391 aa	Known RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	YMR209C	Q03648	457 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	MTQ2	Q03920	221 aa	Predicted RBP	4.59	□□□□□ -1.67
ARC40	YBR234C	RSM24	Q03976	319 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	TDA6	Q06466	467 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	MCH5	Q08777	521 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	SOG2	Q08817	791 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	APC9	Q12107	265 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	NTO1	Q12311	748 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	AVL9	Q12500	764 aa		4.59	□□□□□ -1.67
ARC40	YBR234C	ATP2	P00830	511 aa	Known RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	GAL1	P04385	528 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	IMA3	P0CW40	589 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	IMA4	P0CW41	589 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	GPA2	P10823	449 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	CCR4	P31384	837 aa	Known RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	RPN2	P32565	945 aa	Known RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	CYM1	P32898	989 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	SKG6	P32900	734 aa	Predicted RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	MDJ1	P35191	511 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	TPO5	P36029	618 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	TFA2	P36145	328 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	STV1	P37296	890 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	RDH54	P38086	958 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	MCM7	P38132	845 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	PHO88	P38264	188 aa	Predicted RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	YBR138C	P38277	524 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	SWC5	P38326	303 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	BZZ1	P38822	633 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	KEL1	P38853	1164 aa	Known RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	YAP1801	P38856	637 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	CKB2	P38930	258 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	PCF11	P39081	626 aa	Predicted RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	PIK1	P39104	1066 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	MGS1	P40151	587 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	HPM1	P40481	377 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	SNL1	P40548	159 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	LEM3	P42838	414 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	CCT7	P42943	550 aa	Known RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	SNZ3	P43545	298 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	ARC1	P46672	376 aa	Known RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	POL31	P46957	487 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	EMC2	P47133	292 aa	Known RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	ORC5	P50874	479 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	ORM1	P53224	222 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	RTT102	P53330	157 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	SOK2	P53438	785 aa	Predicted RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	YTP1	P53584	459 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	SNZ2	P53824	298 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	ELP3	Q02908	557 aa	Known RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	YMR226C	Q05016	267 aa	Known RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	COQ9	Q05779	260 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	SMC5	Q08204	1093 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	IMA2	Q08295	589 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	CUE5	Q08412	411 aa	Known RBP	4.58	□□□□□ -1.68
ARC40	YBR234C	OSW2	Q12202	724 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	VCX1	Q99385	411 aa		4.58	□□□□□ -1.68
ARC40	YBR234C	YLR278C	Q05854	1341 aa		4.57	□□□□□ -1.68
ARC40	YBR234C	CAR1	P00812	333 aa	Known RBP	4.57	□□□□□ -1.68
ARC40	YBR234C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	RIP-Chip
ARC40	YBR234C	COR1	P07256	457 aa		4.57	□□□□□ -1.68
ARC40	YBR234C	SAM1	P10659	382 aa	Known RBP	4.57	□□□□□ -1.68
ARC40	YBR234C	SNF4	P12904	322 aa		4.57	□□□□□ -1.68
ARC40	YBR234C	COX11	P19516	300 aa	Known RBP	4.57	□□□□□ -1.68
ARC40	YBR234C	YCR015C	P25616	317 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms