RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 CERKLQ49MI3 558 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-222ENST00000641587 LPAR1Q92633 364 aa12.16□□□□□ -0.46
PHGDH-222ENST00000641587 CCDC136Q96JN2 1154 aa12.16□□□□□ -0.46
PHGDH-222ENST00000641587 LBHD1Q9BQE6 289 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-222ENST00000641587 EHD4Q9H223 541 aa12.16□□□□□ -0.46
PHGDH-222ENST00000641587 ATP11BQ9Y2G3 1177 aa12.16□□□□□ -0.46
PHGDH-222ENST00000641587 ZNF236Q9UL36 1845 aa12.16□□□□□ -0.46
PHGDH-222ENST00000641587 A0A1W2PRG0 241 aa12.15□□□□□ -0.46
PHGDH-222ENST00000641587 DNM1LO00429 736 aa12.15□□□□□ -0.46
PHGDH-222ENST00000641587 GLRX3O76003 335 aaKnown RBP12.15□□□□□ -0.46
PHGDH-222ENST00000641587 IGHA2P01877 340 aa12.15□□□□□ -0.46
PHGDH-222ENST00000641587 HOXC6P09630 235 aa12.15□□□□□ -0.46
PHGDH-222ENST00000641587 USP14P54578 494 aa12.15□□□□□ -0.46
PHGDH-222ENST00000641587 SEPT2Q15019 361 aa12.15□□□□□ -0.46
PHGDH-222ENST00000641587 LBX2Q6XYB7 198 aa12.15□□□□□ -0.46
PHGDH-222ENST00000641587 CLEC10AQ8IUN9 316 aa12.15□□□□□ -0.46
PHGDH-222ENST00000641587 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.15□□□□□ -0.46
PHGDH-222ENST00000641587 MOV10L1Q9BXT6 1211 aaKnown RBP12.15□□□□□ -0.46
PHGDH-222ENST00000641587 ZBTB40Q9NUA8 1239 aa12.15□□□□□ -0.46
PHGDH-222ENST00000641587 IVNS1ABPQ9Y6Y0 642 aa12.15□□□□□ -0.46
PHGDH-222ENST00000641587 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-222ENST00000641587 ADORA2AP29274 412 aa12.14□□□□□ -0.47
PHGDH-222ENST00000641587 SHHQ15465 462 aa12.14□□□□□ -0.47
PHGDH-222ENST00000641587 KIAA1755Q5JYT7 1200 aa12.14□□□□□ -0.47
PHGDH-222ENST00000641587 PRAMEF19Q5SWL8 479 aa12.14□□□□□ -0.47
PHGDH-222ENST00000641587 C9orf50Q5SZB4 431 aa12.14□□□□□ -0.47
PHGDH-222ENST00000641587 B4GALNT3Q6L9W6 998 aa12.14□□□□□ -0.47
PHGDH-222ENST00000641587 SLC44A5Q8NCS7 719 aa12.14□□□□□ -0.47
PHGDH-222ENST00000641587 RIOK1Q9BRS2 568 aaKnown RBP12.14□□□□□ -0.47
PHGDH-222ENST00000641587 PRDM5Q9NQX1 630 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-222ENST00000641587 NOP58Q9Y2X3 529 aaKnown RBP12.14□□□□□ -0.47
PHGDH-222ENST00000641587 MSCO60682 206 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 COBLO75128 1261 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 POLR3DP05423 398 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-222ENST00000641587 CYP2D6P10635 497 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 GABPAQ06546 454 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 TRIM60Q495X7 471 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 FAM109BQ6ICB4 259 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-222ENST00000641587 SH3RF1Q7Z6J0 888 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 DPP9Q86TI2 863 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 TTC6Q86TZ1 520 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 TANGO6Q9C0B7 1094 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 CABP5Q9NP86 173 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 EXOC6BQ9Y2D4 811 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 PARP14Q460N5 1801 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 MYH8P13535 1937 aa12.13□□□□□ -0.47
PHGDH-222ENST00000641587 COL11A1P12107 1806 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-222ENST00000641587 SMCHD1A6NHR9 2005 aa12.12□□□□□ -0.47
PHGDH-222ENST00000641587 SMIM22K7EJ46 135 aa12.12□□□□□ -0.47
PHGDH-222ENST00000641587 MPHOSPH10O00566 681 aaKnown RBP12.12□□□□□ -0.47
PHGDH-222ENST00000641587 ERCC3P19447 782 aa12.12□□□□□ -0.47
PHGDH-222ENST00000641587 MAP3K12Q12852 859 aa12.12□□□□□ -0.47
PHGDH-222ENST00000641587 ZNF697Q5TEC3 545 aa12.12□□□□□ -0.47
PHGDH-222ENST00000641587 SAMD1Q6SPF0 538 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-222ENST00000641587 SLC39A5Q6ZMH5 540 aa12.12□□□□□ -0.47
PHGDH-222ENST00000641587 SDR42E1Q8WUS8 393 aa12.12□□□□□ -0.47
PHGDH-222ENST00000641587 BADQ92934 168 aa12.12□□□□□ -0.47
PHGDH-222ENST00000641587 FERMT2Q96AC1 680 aa12.12□□□□□ -0.47
PHGDH-222ENST00000641587 SPATC1LQ9H0A9 340 aa12.12□□□□□ -0.47
PHGDH-222ENST00000641587 PDLIM7Q9NR12 457 aa12.12□□□□□ -0.47
PHGDH-222ENST00000641587 PRKAG2Q9UGJ0 569 aa12.12□□□□□ -0.47
PHGDH-222ENST00000641587 ZNFX1Q9P2E3 1918 aaKnown RBP12.11□□□□□ -0.47
PHGDH-222ENST00000641587 BAZ2AQ9UIF9 1905 aaKnown RBP12.11□□□□□ -0.47
PHGDH-222ENST00000641587 KBTBD13C9JR72 458 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 IGSF3O75054 1194 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 PLS1Q14651 629 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 SLFNL1Q499Z3 407 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 FAM47AQ5JRC9 791 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 OLFML2BQ68BL8 750 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 AACSQ86V21 672 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 SPICE1Q8N0Z3 855 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 ATG4CQ96DT6 458 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 DYNLL2Q96FJ2 89 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 CDX2Q99626 313 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-222ENST00000641587 IL1RAPL2Q9NP60 686 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 MCM9Q9NXL9 1143 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 PCDHB15Q9Y5E8 787 aa12.11□□□□□ -0.47
PHGDH-222ENST00000641587 MAGEB6P1A0A0J9YX57 407 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 SEPT4O43236 478 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 PDE6AP16499 860 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 ITGB8P26012 769 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 ADCYAP1R1P41586 468 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 COG2Q14746 738 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 SNX17Q15036 470 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 LRRC41Q15345 812 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 CEP85Q6P2H3 762 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 NCAPG2Q86XI2 1143 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 CERS3Q8IU89 383 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 LCORLQ8N3X6 602 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 MYLIPQ8WY64 445 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-222ENST00000641587 TTYH1Q9H313 450 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-222ENST00000641587 MUC3AQ02505 3323 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 ZNF532Q9HCE3 1301 aa12.1□□□□□ -0.47
PHGDH-222ENST00000641587 PLXNA1Q9UIW2 1896 aa12.09□□□□□ -0.47
PHGDH-222ENST00000641587 FLOT1O75955 427 aa12.09□□□□□ -0.47
PHGDH-222ENST00000641587 AKR1B1P15121 316 aa12.09□□□□□ -0.47
PHGDH-222ENST00000641587 DSG3P32926 999 aa12.09□□□□□ -0.47
PHGDH-222ENST00000641587 SLC9C2Q5TAH2 1124 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms