RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 PDE4DIPQ5VU43 2346 aa21.13■□□□□ 0.97
PTPN11-207ENST00000639857 ADCY3O60266 1144 aa21.12■□□□□ 0.97
PTPN11-207ENST00000639857 SLC3A2P08195 630 aaKnown RBP21.12■□□□□ 0.97
PTPN11-207ENST00000639857 CCNA1P78396 465 aa21.12■□□□□ 0.97
PTPN11-207ENST00000639857 PLEKHM2Q8IWE5 1019 aa21.12■□□□□ 0.97
PTPN11-207ENST00000639857 PLIN4Q96Q06 1357 aa21.11■□□□□ 0.97
PTPN11-207ENST00000639857 SPDYE16A6NNV3 312 aaPredicted RBP21.11■□□□□ 0.97
PTPN11-207ENST00000639857 WDR46O15213 610 aaKnown RBP21.11■□□□□ 0.97
PTPN11-207ENST00000639857 HOXC10Q9NYD6 342 aa21.11■□□□□ 0.97
PTPN11-207ENST00000639857 SYNPO2Q9UMS6 1093 aa21.11■□□□□ 0.97
PTPN11-207ENST00000639857 ZNF236Q9UL36 1845 aa21.11■□□□□ 0.97
PTPN11-207ENST00000639857 EEF2P13639 858 aaKnown RBP21.1■□□□□ 0.97
PTPN11-207ENST00000639857 CAPN2P17655 700 aa21.1■□□□□ 0.97
PTPN11-207ENST00000639857 PDE4BQ07343 736 aa21.1■□□□□ 0.97
PTPN11-207ENST00000639857 COG2Q14746 738 aa21.1■□□□□ 0.97
PTPN11-207ENST00000639857 POTEEQ6S8J3 1075 aa21.1■□□□□ 0.97
PTPN11-207ENST00000639857 CLEC10AQ8IUN9 316 aa21.1■□□□□ 0.97
PTPN11-207ENST00000639857 NKX2-3Q8TAU0 364 aa21.1■□□□□ 0.97
PTPN11-207ENST00000639857 PAGR1Q9BTK6 254 aa21.1■□□□□ 0.97
PTPN11-207ENST00000639857 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.1■□□□□ 0.97
PTPN11-207ENST00000639857 GOPCQ9HD26 462 aa21.1■□□□□ 0.97
PTPN11-207ENST00000639857 GJD2Q9UKL4 321 aa21.1■□□□□ 0.97
PTPN11-207ENST00000639857 ZMYM6O95789 1325 aa21.09■□□□□ 0.97
PTPN11-207ENST00000639857 COL11A1P12107 1806 aaPredicted RBP21.09■□□□□ 0.97
PTPN11-207ENST00000639857 TRIM6-TRIM34B2RNG4 842 aa21.09■□□□□ 0.97
PTPN11-207ENST00000639857 PPARAQ07869 468 aa21.09■□□□□ 0.97
PTPN11-207ENST00000639857 MCMDC2Q4G0Z9 681 aa21.09■□□□□ 0.97
PTPN11-207ENST00000639857 CCAR1Q8IX12 1150 aaKnown RBP21.09■□□□□ 0.97
PTPN11-207ENST00000639857 ZNF444Q8N0Y2 327 aaPredicted RBP21.09■□□□□ 0.97
PTPN11-207ENST00000639857 MB21D1Q8N884 522 aa21.09■□□□□ 0.97
PTPN11-207ENST00000639857 TANGO6Q9C0B7 1094 aa21.09■□□□□ 0.97
PTPN11-207ENST00000639857 NYAP2Q9P242 653 aa21.09■□□□□ 0.97
PTPN11-207ENST00000639857 FOXP2O15409 715 aa21.08■□□□□ 0.97
PTPN11-207ENST00000639857 CNMDO75829 334 aa21.08■□□□□ 0.97
PTPN11-207ENST00000639857 XRCC5P13010 732 aaKnown RBP21.08■□□□□ 0.97
PTPN11-207ENST00000639857 ALX1Q15699 326 aa21.08■□□□□ 0.97
PTPN11-207ENST00000639857 NUDT12Q9BQG2 462 aa21.08■□□□□ 0.97
PTPN11-207ENST00000639857 BIN2Q9UBW5 565 aaPredicted RBP21.08■□□□□ 0.97
PTPN11-207ENST00000639857 LAMA4Q16363 1823 aa21.08■□□□□ 0.96
PTPN11-207ENST00000639857 IGKV6D-41A0A0C4DH26 115 aa21.07■□□□□ 0.96
PTPN11-207ENST00000639857 INHAP05111 366 aa21.07■□□□□ 0.96
PTPN11-207ENST00000639857 GJB1P08034 283 aa21.07■□□□□ 0.96
PTPN11-207ENST00000639857 MFAP1P55081 439 aaKnown RBP21.07■□□□□ 0.96
PTPN11-207ENST00000639857 MTFR1Q15390 333 aa21.07■□□□□ 0.96
PTPN11-207ENST00000639857 Q3C1V9 767 aa21.07■□□□□ 0.96
PTPN11-207ENST00000639857 KIAA1755Q5JYT7 1200 aa21.07■□□□□ 0.96
PTPN11-207ENST00000639857 CCDC129Q6ZRS4 1044 aa21.07■□□□□ 0.96
PTPN11-207ENST00000639857 GPR142Q7Z601 462 aa21.07■□□□□ 0.96
PTPN11-207ENST00000639857 TRMT44Q8IYL2 757 aaKnown RBP21.07■□□□□ 0.96
PTPN11-207ENST00000639857 PORCNQ9H237 461 aa21.07■□□□□ 0.96
PTPN11-207ENST00000639857 ANAPC4Q9UJX5 808 aa21.07■□□□□ 0.96
PTPN11-207ENST00000639857 A0A0D9SFI3 127 aa21.06■□□□□ 0.96
PTPN11-207ENST00000639857 HMGCRP04035 888 aa21.06■□□□□ 0.96
PTPN11-207ENST00000639857 CCL5P13501 91 aa21.06■□□□□ 0.96
PTPN11-207ENST00000639857 ELNP15502 786 aa21.06■□□□□ 0.96
PTPN11-207ENST00000639857 EN2P19622 333 aaPredicted RBP21.06■□□□□ 0.96
PTPN11-207ENST00000639857 PPP4R3BQ5MIZ7 849 aa21.06■□□□□ 0.96
PTPN11-207ENST00000639857 PLEKHH3Q7Z736 793 aa21.06■□□□□ 0.96
PTPN11-207ENST00000639857 RILPL2Q969X0 211 aa21.06■□□□□ 0.96
PTPN11-207ENST00000639857 FAM227BQ96M60 508 aa21.06■□□□□ 0.96
PTPN11-207ENST00000639857 MKI67P46013 3256 aaKnown RBP21.05■□□□□ 0.96
PTPN11-207ENST00000639857 HIP1O00291 1037 aa21.05■□□□□ 0.96
PTPN11-207ENST00000639857 FLOT1O75955 427 aa21.05■□□□□ 0.96
PTPN11-207ENST00000639857 DSG3P32926 999 aa21.05■□□□□ 0.96
PTPN11-207ENST00000639857 GJA8P48165 433 aa21.05■□□□□ 0.96
PTPN11-207ENST00000639857 ATP2B2Q01814 1243 aa21.05■□□□□ 0.96
PTPN11-207ENST00000639857 MORN1Q5T089 497 aa21.05■□□□□ 0.96
PTPN11-207ENST00000639857 SPICE1Q8N0Z3 855 aa21.05■□□□□ 0.96
PTPN11-207ENST00000639857 SHCBP1Q8NEM2 672 aa21.05■□□□□ 0.96
PTPN11-207ENST00000639857 NEDD1Q8NHV4 660 aa21.05■□□□□ 0.96
PTPN11-207ENST00000639857 USP6NLQ92738 828 aa21.05■□□□□ 0.96
PTPN11-207ENST00000639857 RNF208Q9H0X6 261 aa21.05■□□□□ 0.96
PTPN11-207ENST00000639857 BTBD7Q9P203 1132 aa21.05■□□□□ 0.96
PTPN11-207ENST00000639857 CCDC171Q6TFL3 1326 aa21.04■□□□□ 0.96
PTPN11-207ENST00000639857 PEX10O60683 326 aa21.04■□□□□ 0.96
PTPN11-207ENST00000639857 MYCP01106 439 aaPredicted RBP21.04■□□□□ 0.96
PTPN11-207ENST00000639857 TSPY3P0CV98 308 aa21.04■□□□□ 0.96
PTPN11-207ENST00000639857 TSPY8P0CW00 308 aa21.04■□□□□ 0.96
PTPN11-207ENST00000639857 SDSP20132 328 aa21.04■□□□□ 0.96
PTPN11-207ENST00000639857 RGS2P41220 211 aa21.04■□□□□ 0.96
PTPN11-207ENST00000639857 NMIQ13287 307 aaPredicted RBP21.04■□□□□ 0.96
PTPN11-207ENST00000639857 VPS53Q5VIR6 699 aa21.04■□□□□ 0.96
PTPN11-207ENST00000639857 STK11IPQ8N1F8 1099 aa21.04■□□□□ 0.96
PTPN11-207ENST00000639857 MKL1Q969V6 931 aa21.04■□□□□ 0.96
PTPN11-207ENST00000639857 APBA2Q99767 749 aa21.04■□□□□ 0.96
PTPN11-207ENST00000639857 CWC22Q9HCG8 908 aaKnown RBP21.04■□□□□ 0.96
PTPN11-207ENST00000639857 MTMR4Q9NYA4 1195 aa21.04■□□□□ 0.96
PTPN11-207ENST00000639857 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.04■□□□□ 0.96
PTPN11-207ENST00000639857 PRDM1O75626 825 aa21.03■□□□□ 0.96
PTPN11-207ENST00000639857 TTLL1O95922 423 aa21.03■□□□□ 0.96
PTPN11-207ENST00000639857 CEP95Q96GE4 821 aa21.03■□□□□ 0.96
PTPN11-207ENST00000639857 PAK6Q9NQU5 681 aaPredicted RBP21.03■□□□□ 0.96
PTPN11-207ENST00000639857 ADAMTS5Q9UNA0 930 aa21.03■□□□□ 0.96
PTPN11-207ENST00000639857 IVNS1ABPQ9Y6Y0 642 aa21.03■□□□□ 0.96
PTPN11-207ENST00000639857 SLC15A5A6NIM6 579 aa21.02■□□□□ 0.96
PTPN11-207ENST00000639857 FGRP09769 529 aa21.02■□□□□ 0.96
PTPN11-207ENST00000639857 HSPD1P10809 573 aaKnown RBP21.02■□□□□ 0.96
PTPN11-207ENST00000639857 PCP11498 1178 aaKnown RBP21.02■□□□□ 0.96
PTPN11-207ENST00000639857 IRX6P78412 446 aaPredicted RBP21.02■□□□□ 0.96
PTPN11-207ENST00000639857 SPATC1LQ9H0A9 340 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms