RNA–Protein interactions for RNA: ENST00000637937.1

CTSD-214, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-214ENST00000637937 MGAMO43451 1857 aa20.27■□□□□ 0.84
CTSD-214ENST00000637937 GJB1P08034 283 aa20.27■□□□□ 0.84
CTSD-214ENST00000637937 EEF2P13639 858 aaKnown RBP20.27■□□□□ 0.84
CTSD-214ENST00000637937 CYP2B6P20813 491 aa20.27■□□□□ 0.84
CTSD-214ENST00000637937 CCNA1P78396 465 aa20.27■□□□□ 0.84
CTSD-214ENST00000637937 COG2Q14746 738 aa20.27■□□□□ 0.84
CTSD-214ENST00000637937 SMC5Q8IY18 1101 aa20.27■□□□□ 0.84
CTSD-214ENST00000637937 NKX2-3Q8TAU0 364 aa20.27■□□□□ 0.84
CTSD-214ENST00000637937 LPAR1Q92633 364 aa20.27■□□□□ 0.84
CTSD-214ENST00000637937 NUDT12Q9BQG2 462 aa20.27■□□□□ 0.84
CTSD-214ENST00000637937 UNC93B1Q9H1C4 597 aa20.27■□□□□ 0.84
CTSD-214ENST00000637937 HOXC10Q9NYD6 342 aa20.27■□□□□ 0.84
CTSD-214ENST00000637937 SPDYE16A6NNV3 312 aaPredicted RBP20.26■□□□□ 0.83
CTSD-214ENST00000637937 RAD21O60216 631 aa20.26■□□□□ 0.83
CTSD-214ENST00000637937 CNMDO75829 334 aa20.26■□□□□ 0.83
CTSD-214ENST00000637937 KIAA1755Q5JYT7 1200 aa20.26■□□□□ 0.83
CTSD-214ENST00000637937 WDR78Q5VTH9 848 aa20.26■□□□□ 0.83
CTSD-214ENST00000637937 GPR142Q7Z601 462 aa20.26■□□□□ 0.83
CTSD-214ENST00000637937 PLEKHH3Q7Z736 793 aa20.26■□□□□ 0.83
CTSD-214ENST00000637937 SOCS4Q8WXH5 440 aa20.26■□□□□ 0.83
CTSD-214ENST00000637937 NAPBQ9H115 298 aa20.26■□□□□ 0.83
CTSD-214ENST00000637937 VCPKMTQ9H867 229 aa20.26■□□□□ 0.83
CTSD-214ENST00000637937 ZNF287Q9HBT7 754 aa20.26■□□□□ 0.83
CTSD-214ENST00000637937 GJA8P48165 433 aa20.25■□□□□ 0.83
CTSD-214ENST00000637937 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
CTSD-214ENST00000637937 LBX2Q6XYB7 198 aa20.25■□□□□ 0.83
CTSD-214ENST00000637937 CHD1LQ86WJ1 897 aa20.25■□□□□ 0.83
CTSD-214ENST00000637937 ZNF444Q8N0Y2 327 aaPredicted RBP20.25■□□□□ 0.83
CTSD-214ENST00000637937 BTBD7Q9P203 1132 aa20.25■□□□□ 0.83
CTSD-214ENST00000637937 TRIM6-TRIM34B2RNG4 842 aa20.24■□□□□ 0.83
CTSD-214ENST00000637937 PRDM1O75626 825 aa20.24■□□□□ 0.83
CTSD-214ENST00000637937 FLOT1O75955 427 aa20.24■□□□□ 0.83
CTSD-214ENST00000637937 HMGCRP04035 888 aa20.24■□□□□ 0.83
CTSD-214ENST00000637937 RASA1P20936 1047 aa20.24■□□□□ 0.83
CTSD-214ENST00000637937 PRPF38BQ5VTL8 546 aaKnown RBP20.24■□□□□ 0.83
CTSD-214ENST00000637937 CCDC129Q6ZRS4 1044 aa20.24■□□□□ 0.83
CTSD-214ENST00000637937 U2AF1L4Q8WU68 220 aaKnown RBP20.24■□□□□ 0.83
CTSD-214ENST00000637937 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.24■□□□□ 0.83
CTSD-214ENST00000637937 ROBO3Q96MS0 1386 aa20.23■□□□□ 0.83
CTSD-214ENST00000637937 SLC3A2P08195 630 aaKnown RBP20.23■□□□□ 0.83
CTSD-214ENST00000637937 NUCB1Q02818 461 aa20.23■□□□□ 0.83
CTSD-214ENST00000637937 RILPL2Q969X0 211 aa20.23■□□□□ 0.83
CTSD-214ENST00000637937 SHISA4Q96DD7 197 aa20.23■□□□□ 0.83
CTSD-214ENST00000637937 GOPCQ9HD26 462 aa20.23■□□□□ 0.83
CTSD-214ENST00000637937 RBBP6Q7Z6E9 1792 aaKnown RBP20.22■□□□□ 0.83
CTSD-214ENST00000637937 WDR46O15213 610 aaKnown RBP20.22■□□□□ 0.83
CTSD-214ENST00000637937 SGPL1O95470 568 aa20.22■□□□□ 0.83
CTSD-214ENST00000637937 RGS2P41220 211 aa20.22■□□□□ 0.83
CTSD-214ENST00000637937 PDE4BQ07343 736 aa20.22■□□□□ 0.83
CTSD-214ENST00000637937 DEFB118Q96PH6 123 aa20.22■□□□□ 0.83
CTSD-214ENST00000637937 IVNS1ABPQ9Y6Y0 642 aa20.22■□□□□ 0.83
CTSD-214ENST00000637937 TFRCP02786 760 aaKnown RBP20.21■□□□□ 0.83
CTSD-214ENST00000637937 XRCC5P13010 732 aaKnown RBP20.21■□□□□ 0.83
CTSD-214ENST00000637937 DSG3P32926 999 aa20.21■□□□□ 0.83
CTSD-214ENST00000637937 IRX6P78412 446 aaPredicted RBP20.21■□□□□ 0.83
CTSD-214ENST00000637937 PPARAQ07869 468 aa20.21■□□□□ 0.83
CTSD-214ENST00000637937 TRIM32Q13049 653 aa20.21■□□□□ 0.83
CTSD-214ENST00000637937 MORN1Q5T089 497 aa20.21■□□□□ 0.83
CTSD-214ENST00000637937 TRIB2Q92519 343 aa20.21■□□□□ 0.83
CTSD-214ENST00000637937 HELLSQ9NRZ9 838 aa20.21■□□□□ 0.83
CTSD-214ENST00000637937 ZKSCAN1P17029 563 aaPredicted RBP20.2■□□□□ 0.82
CTSD-214ENST00000637937 PLS1Q14651 629 aa20.2■□□□□ 0.82
CTSD-214ENST00000637937 TRMT44Q8IYL2 757 aaKnown RBP20.2■□□□□ 0.82
CTSD-214ENST00000637937 MB21D1Q8N884 522 aa20.2■□□□□ 0.82
CTSD-214ENST00000637937 USP6NLQ92738 828 aa20.2■□□□□ 0.82
CTSD-214ENST00000637937 ATG4CQ96DT6 458 aa20.2■□□□□ 0.82
CTSD-214ENST00000637937 FAM227BQ96M60 508 aa20.2■□□□□ 0.82
CTSD-214ENST00000637937 SPATC1LQ9H0A9 340 aa20.2■□□□□ 0.82
CTSD-214ENST00000637937 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.2■□□□□ 0.823e-9■■■■□ 20.4
CTSD-214ENST00000637937 HMX1Q9NP08 348 aaPredicted RBP20.2■□□□□ 0.82
CTSD-214ENST00000637937 CLIP2Q9UDT6 1046 aa20.2■□□□□ 0.82
CTSD-214ENST00000637937 DOCK3Q8IZD9 2030 aa20.2■□□□□ 0.82
CTSD-214ENST00000637937 TSPY3P0CV98 308 aa20.19■□□□□ 0.82
CTSD-214ENST00000637937 TSPY8P0CW00 308 aa20.19■□□□□ 0.82
CTSD-214ENST00000637937 PTPREP23469 700 aa20.19■□□□□ 0.82
CTSD-214ENST00000637937 MAP2K5Q13163 448 aa20.19■□□□□ 0.82
CTSD-214ENST00000637937 MCMDC2Q4G0Z9 681 aa20.19■□□□□ 0.82
CTSD-214ENST00000637937 FAM83BQ5T0W9 1011 aa20.19■□□□□ 0.82
CTSD-214ENST00000637937 VPS53Q5VIR6 699 aa20.19■□□□□ 0.82
CTSD-214ENST00000637937 PLEKHM2Q8IWE5 1019 aa20.19■□□□□ 0.82
CTSD-214ENST00000637937 MOV10L1Q9BXT6 1211 aaKnown RBP20.19■□□□□ 0.82
CTSD-214ENST00000637937 PAK6Q9NQU5 681 aaPredicted RBP20.19■□□□□ 0.82
CTSD-214ENST00000637937 NYAP2Q9P242 653 aa20.19■□□□□ 0.82
CTSD-214ENST00000637937 RPTORQ8N122 1335 aa20.19■□□□□ 0.82
CTSD-214ENST00000637937 MYH8P13535 1937 aa20.19■□□□□ 0.82
CTSD-214ENST00000637937 SLC15A5A6NIM6 579 aa20.18■□□□□ 0.82
CTSD-214ENST00000637937 CCL14Q16627 93 aa20.18■□□□□ 0.82
CTSD-214ENST00000637937 FAM47AQ5JRC9 791 aa20.18■□□□□ 0.82
CTSD-214ENST00000637937 TICAM2Q86XR7 235 aa20.18■□□□□ 0.82
CTSD-214ENST00000637937 APBA2Q99767 749 aa20.18■□□□□ 0.82
CTSD-214ENST00000637937 FBXO28Q9NVF7 368 aa20.18■□□□□ 0.82
CTSD-214ENST00000637937 A0A0D9SFI3 127 aa20.17■□□□□ 0.82
CTSD-214ENST00000637937 F5H6K3 240 aa20.17■□□□□ 0.82
CTSD-214ENST00000637937 FOXP2O15409 715 aa20.17■□□□□ 0.82
CTSD-214ENST00000637937 PRKAR2AP13861 404 aaKnown RBP20.17■□□□□ 0.82
CTSD-214ENST00000637937 ERCC3P19447 782 aa20.17■□□□□ 0.82
CTSD-214ENST00000637937 TFAP4Q01664 338 aa20.17■□□□□ 0.82
CTSD-214ENST00000637937 CTDSPL2Q05D32 466 aa20.17■□□□□ 0.82
CTSD-214ENST00000637937 KLRC3Q07444 240 aa20.17■□□□□ 0.82
CTSD-214ENST00000637937 NMIQ13287 307 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms