RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 RSBN1LQ6PCB5 846 aaPredicted RBP24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 USP17L2Q6R6M4 530 aa24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 ZSCAN29Q8IWY8 852 aaPredicted RBP24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 FUCA2Q9BTY2 467 aa24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 TNMDQ9H2S6 317 aa24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 FOXP1Q9H334 677 aaPredicted RBP24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 CLSTN2Q9H4D0 955 aa24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 CYTH3O43739 400 aa24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 SCG2P13521 617 aa24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 ATP2B1P20020 1258 aa24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 TGFB2P61812 414 aa24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 SNW1Q13573 536 aaKnown RBP24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 PTPAQ15257 358 aa24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 GPKOWQ92917 476 aaPredicted RBP eCLIP24.98■■□□□ 1.59
CHRNA7-228ENST00000637519 PLIN4Q96Q06 1357 aa24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 A0A1B0GVL5 298 aa24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 LETM1O95202 739 aaPredicted RBP24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 SLC39A14Q15043 492 aa24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 NPY5RQ15761 445 aa24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 GRIPAP1Q4V328 841 aa24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 IDI2Q9BXS1 227 aa24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 MTMR4Q9NYA4 1195 aa24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 TOP1P11387 765 aaKnown RBP24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 XBP1P17861 261 aa24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 PFKFB3Q16875 520 aaPredicted RBP24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 DALRD3Q5D0E6 543 aaKnown RBP24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 ADALQ6DHV7 355 aa24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 CABP5Q9NP86 173 aa24.97■■□□□ 1.59
CHRNA7-228ENST00000637519 MYH8P13535 1937 aa24.96■■□□□ 1.59
CHRNA7-228ENST00000637519 MPHOSPH10O00566 681 aaKnown RBP24.96■■□□□ 1.59
CHRNA7-228ENST00000637519 MAP3K11Q16584 847 aa24.96■■□□□ 1.59
CHRNA7-228ENST00000637519 MRPS27Q92552 414 aaKnown RBP24.96■■□□□ 1.59
CHRNA7-228ENST00000637519 PSME4Q14997 1843 aa24.96■■□□□ 1.59
CHRNA7-228ENST00000637519 CLRN2A0PK11 232 aa24.95■■□□□ 1.59
CHRNA7-228ENST00000637519 PALM3A6NDB9 673 aaPredicted RBP24.95■■□□□ 1.59
CHRNA7-228ENST00000637519 KRT2P35908 639 aa24.95■■□□□ 1.59
CHRNA7-228ENST00000637519 AXDND1Q5T1B0 1012 aaPredicted RBP24.95■■□□□ 1.59
CHRNA7-228ENST00000637519 CCDC73Q6ZRK6 1079 aa24.95■■□□□ 1.59
CHRNA7-228ENST00000637519 SWAP70Q9UH65 585 aa24.95■■□□□ 1.59
CHRNA7-228ENST00000637519 IGKV6D-41A0A0C4DH26 115 aa24.95■■□□□ 1.58
CHRNA7-228ENST00000637519 USP17L5A8MUK1 530 aa24.95■■□□□ 1.58
CHRNA7-228ENST00000637519 NOVP48745 357 aa24.95■■□□□ 1.58
CHRNA7-228ENST00000637519 NDUFA8P51970 172 aa24.95■■□□□ 1.58
CHRNA7-228ENST00000637519 NIM1KQ8IY84 436 aa24.95■■□□□ 1.58
CHRNA7-228ENST00000637519 ENGASEQ8NFI3 743 aa24.95■■□□□ 1.58
CHRNA7-228ENST00000637519 PCDHB6Q9Y5E3 794 aa24.95■■□□□ 1.58
CHRNA7-228ENST00000637519 VIL1P09327 827 aaKnown RBP24.94■■□□□ 1.58
CHRNA7-228ENST00000637519 CLIC6Q96NY7 704 aa24.94■■□□□ 1.58
CHRNA7-228ENST00000637519 FRMPD2Q68DX3 1309 aaPredicted RBP24.94■■□□□ 1.58
CHRNA7-228ENST00000637519 KLRF2D3W0D1 207 aa24.93■■□□□ 1.58
CHRNA7-228ENST00000637519 WNT7AO00755 349 aa24.93■■□□□ 1.58
CHRNA7-228ENST00000637519 FAM160A1Q05DH4 1040 aa24.93■■□□□ 1.58
CHRNA7-228ENST00000637519 TYW1BQ6NUM6 668 aa24.93■■□□□ 1.58
CHRNA7-228ENST00000637519 GMLQ99445 158 aa24.93■■□□□ 1.58
CHRNA7-228ENST00000637519 PARP1P09874 1014 aaKnown RBP24.93■■□□□ 1.58
CHRNA7-228ENST00000637519 EHD4Q9H223 541 aa24.93■■□□□ 1.58
CHRNA7-228ENST00000637519 CLIP2Q9UDT6 1046 aa24.93■■□□□ 1.58
CHRNA7-228ENST00000637519 MRVI1Q9Y6F6 885 aa24.93■■□□□ 1.58
CHRNA7-228ENST00000637519 A0A1W2PQ27 194 aa24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 A0A1W2PQ64 194 aa24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 A0A1W2PQD8 194 aa24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 NLRP5P59047 1200 aa24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 ATP2B2Q01814 1243 aa24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 SGIP1Q9BQI5 828 aa24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 ZNRF3Q9ULT6 936 aa24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 SPDYE2BA6NHP3 402 aa24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 TCP10L2B9ZVM9 353 aa24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 SPDYE6P0CI01 402 aa24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 GNAQP50148 359 aa24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 ERCC4Q92889 916 aaPredicted RBP24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 DHX36Q9H2U1 1008 aaKnown RBP24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 BCS1LQ9Y276 419 aa24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 BRCA1P38398 1863 aaKnown RBP24.92■■□□□ 1.58
CHRNA7-228ENST00000637519 NFKBIEO00221 500 aa24.91■■□□□ 1.58
CHRNA7-228ENST00000637519 PDHBP11177 359 aa24.91■■□□□ 1.58
CHRNA7-228ENST00000637519 SOGA3Q5TF21 947 aa24.91■■□□□ 1.58
CHRNA7-228ENST00000637519 WWC2Q6AWC2 1192 aa24.91■■□□□ 1.58
CHRNA7-228ENST00000637519 HOMER1Q86YM7 354 aa24.91■■□□□ 1.58
CHRNA7-228ENST00000637519 FMR1NBQ8N0W7 255 aaPredicted RBP24.91■■□□□ 1.58
CHRNA7-228ENST00000637519 TNFRSF25Q93038 417 aa24.91■■□□□ 1.58
CHRNA7-228ENST00000637519 UBA5Q9GZZ9 404 aa24.91■■□□□ 1.58
CHRNA7-228ENST00000637519 TAOK3Q9H2K8 898 aa24.91■■□□□ 1.58
CHRNA7-228ENST00000637519 PI4KBQ9UBF8 816 aa24.91■■□□□ 1.58
CHRNA7-228ENST00000637519 MYO3BQ8WXR4 1341 aa24.9■■□□□ 1.58
CHRNA7-228ENST00000637519 GRIN1Q05586 938 aa24.9■■□□□ 1.58
CHRNA7-228ENST00000637519 CXCL9Q07325 125 aa24.9■■□□□ 1.58
CHRNA7-228ENST00000637519 RILPL1Q5EBL4 403 aa24.9■■□□□ 1.58
CHRNA7-228ENST00000637519 RBM43Q6ZSC3 357 aaKnown RBP24.9■■□□□ 1.58
CHRNA7-228ENST00000637519 HEATR3Q7Z4Q2 680 aa24.9■■□□□ 1.58
CHRNA7-228ENST00000637519 SHTN1A0MZ66 631 aa24.9■■□□□ 1.58
CHRNA7-228ENST00000637519 KINO60870 393 aaKnown RBP24.9■■□□□ 1.58
CHRNA7-228ENST00000637519 PPP6R2O75170 966 aa24.9■■□□□ 1.58
CHRNA7-228ENST00000637519 SHC4Q6S5L8 630 aa24.9■■□□□ 1.58
CHRNA7-228ENST00000637519 VAT1LQ9HCJ6 419 aa24.9■■□□□ 1.58
CHRNA7-228ENST00000637519 TTLL1O95922 423 aa24.89■■□□□ 1.58
CHRNA7-228ENST00000637519 PFKFB1P16118 471 aa24.89■■□□□ 1.58
CHRNA7-228ENST00000637519 TYRO3Q06418 890 aa24.89■■□□□ 1.58
CHRNA7-228ENST00000637519 SPECC1Q5M775 1068 aa24.89■■□□□ 1.58
CHRNA7-228ENST00000637519 RASGRP4Q8TDF6 673 aa24.89■■□□□ 1.58
CHRNA7-228ENST00000637519 BRMS1Q9HCU9 246 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms