RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 EPB41L4AQ9HCS5 686 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-210ENST00000635776 SLIT2O94813 1529 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 MFSD14BQ5SR56 506 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 CTR9Q6PD62 1173 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 TFCP2L1Q9NZI6 479 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 MYO1AQ9UBC5 1043 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 STK17AQ9UEE5 414 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 NFE2L3Q9Y4A8 694 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 KDM3AQ9Y4C1 1321 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 RXRAP19793 462 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 HEATR3Q7Z4Q2 680 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 ZSCAN29Q8IWY8 852 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 SDR42E1Q8WUS8 393 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 EEF1GP26641 437 aaKnown RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 IQCB1Q15051 598 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 CCDC84Q86UT8 332 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 RAB11FIP4Q86YS3 637 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 FOXP4Q8IVH2 680 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 REXO1Q8N1G1 1221 aaKnown RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 SLC4A9Q96Q91 983 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 PHF20Q9BVI0 1012 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 HPSEQ9Y251 543 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 RABGAP1Q9Y3P9 1069 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 POLR2DO15514 142 aaKnown RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 LMOD1P29536 600 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 BTDP43251 543 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 C12orf60Q5U649 245 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 NEK8Q86SG6 692 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 ENAHQ8N8S7 591 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 ARHGEF1Q92888 912 aaKnown RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 ZKSCAN3Q9BRR0 538 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 PCDHA5Q9Y5H7 936 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 MARF1Q9Y4F3 1742 aaKnown RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 AKR1B15C9JRZ8 316 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 KRT18P05783 430 aaKnown RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 PAK1Q13153 545 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 PIK3AP1Q6ZUJ8 805 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 SV2BQ7L1I2 683 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 SERTAD1Q9UHV2 236 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 COL18A1P39060 1754 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 PRKAB2O43741 272 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 EIF3JO75822 258 aaKnown RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 HOXA10P31260 410 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 EPS15P42566 896 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 PPP2R3AQ06190 1150 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 CEP112Q8N8E3 955 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 BAG1Q99933 345 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 CD209Q9NNX6 404 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 PODXL2Q9NZ53 605 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 TBC1D9BQ66K14 1250 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 HOOK2Q96ED9 719 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 SYNRGQ9UMZ2 1314 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 KLRF2D3W0D1 207 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 GNA14O95837 355 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 CDC27P30260 824 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 HDLBPQ00341 1268 aaKnown RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 IKQ13123 557 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 SEC23AQ15436 765 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 CCDC96Q2M329 555 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 AXDND1Q5T1B0 1012 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 SEPT12Q8IYM1 358 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 STK11IPQ8N1F8 1099 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 C16orf45Q96MC5 204 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-210ENST00000635776 VPS54Q9P1Q0 977 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 KCNJ14Q9UNX9 436 aa5.14□□□□□ -1.59
SCN1A-210ENST00000635776 ATP2C1P98194 919 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-210ENST00000635776 NTRK3Q16288 839 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 KRT27Q7Z3Y8 459 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 LINC00116Q8NCU8 138 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 DHTKD1Q96HY7 919 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-210ENST00000635776 TRIM47Q96LD4 638 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 PRDM1O75626 825 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 CASQ1P31415 396 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 XPO4Q9C0E2 1151 aaKnown RBP5.13□□□□□ -1.59
SCN1A-210ENST00000635776 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.13□□□□□ -1.59
SCN1A-210ENST00000635776 TAF6LQ9Y6J9 622 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 KAT6BQ8WYB5 2073 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 H0YIN7 160 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 OR52Z1P0C646 297 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 SPA17Q15506 151 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 RPGRIP1Q96KN7 1286 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 MYL10Q9BUA6 226 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-210ENST00000635776 VWA3AA6NCI4 1184 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 CCDC172P0C7W6 258 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 PSMD2Q13200 908 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 TMCO3Q6UWJ1 677 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 SYNE4Q8N205 404 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 OGFOD1Q8N543 542 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 CCDC43Q96MW1 224 aaKnown RBP5.13□□□□□ -1.59
SCN1A-210ENST00000635776 SYNPO2Q9UMS6 1093 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 GPR75-ASB3A0A0A6YYF3 556 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 PPEF1O14829 653 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-210ENST00000635776 GTF2F1P35269 517 aaKnown RBP eCLIP5.13□□□□□ -1.59
SCN1A-210ENST00000635776 CKAP4Q07065 602 aaKnown RBP5.13□□□□□ -1.59
SCN1A-210ENST00000635776 TROAPQ12815 778 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 VPS36Q86VN1 386 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 MASTLQ96GX5 879 aa5.13□□□□□ -1.59
SCN1A-210ENST00000635776 VSTM4Q8IW00 320 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms