RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 RASA1P20936 1047 aa12.9□□□□□ -0.34
CHD2-217ENST00000629136 TDO2P48775 406 aa12.9□□□□□ -0.34
CHD2-217ENST00000629136 IFNL3Q8IZI9 196 aa12.9□□□□□ -0.34
CHD2-217ENST00000629136 STK11IPQ8N1F8 1099 aa12.9□□□□□ -0.34
CHD2-217ENST00000629136 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.9□□□□□ -0.34
CHD2-217ENST00000629136 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
CHD2-217ENST00000629136 BTBD7Q9P203 1132 aa12.9□□□□□ -0.34
CHD2-217ENST00000629136 BIN2Q9UBW5 565 aaPredicted RBP12.9□□□□□ -0.34
CHD2-217ENST00000629136 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
CHD2-217ENST00000629136 SUPT16HQ9Y5B9 1047 aaKnown RBP12.9□□□□□ -0.34
CHD2-217ENST00000629136 MINDY4BA8MYZ0 360 aa12.89□□□□□ -0.35
CHD2-217ENST00000629136 PATL2C9JE40 543 aaKnown RBP12.89□□□□□ -0.35
CHD2-217ENST00000629136 MAPK4P31152 587 aa12.89□□□□□ -0.35
CHD2-217ENST00000629136 B4GALNT3Q6L9W6 998 aa12.89□□□□□ -0.35
CHD2-217ENST00000629136 CCDC129Q6ZRS4 1044 aa12.89□□□□□ -0.35
CHD2-217ENST00000629136 GPR142Q7Z601 462 aa12.89□□□□□ -0.35
CHD2-217ENST00000629136 LPAR1Q92633 364 aa12.89□□□□□ -0.35
CHD2-217ENST00000629136 EVI5LQ96CN4 794 aa12.89□□□□□ -0.35
CHD2-217ENST00000629136 UNC93B1Q9H1C4 597 aa12.89□□□□□ -0.35
CHD2-217ENST00000629136 RWDD1Q9H446 243 aaPredicted RBP12.89□□□□□ -0.35
CHD2-217ENST00000629136 SH2D4AQ9H788 454 aa12.89□□□□□ -0.35
CHD2-217ENST00000629136 VCPKMTQ9H867 229 aa12.89□□□□□ -0.35
CHD2-217ENST00000629136 RABGAP1Q9Y3P9 1069 aa12.89□□□□□ -0.35
CHD2-217ENST00000629136 GJB1P08034 283 aa12.88□□□□□ -0.35
CHD2-217ENST00000629136 EEF2P13639 858 aaKnown RBP12.88□□□□□ -0.35
CHD2-217ENST00000629136 GJA8P48165 433 aa12.88□□□□□ -0.35
CHD2-217ENST00000629136 TRIM32Q13049 653 aa12.88□□□□□ -0.35
CHD2-217ENST00000629136 SPICE1Q8N0Z3 855 aa12.88□□□□□ -0.35
CHD2-217ENST00000629136 SOCS4Q8WXH5 440 aa12.88□□□□□ -0.35
CHD2-217ENST00000629136 TRIB2Q92519 343 aa12.88□□□□□ -0.35
CHD2-217ENST00000629136 USP6NLQ92738 828 aa12.88□□□□□ -0.35
CHD2-217ENST00000629136 TANGO6Q9C0B7 1094 aa12.88□□□□□ -0.35
CHD2-217ENST00000629136 RNF208Q9H0X6 261 aa12.88□□□□□ -0.35
CHD2-217ENST00000629136 PLIN4Q96Q06 1357 aa12.88□□□□□ -0.35
CHD2-217ENST00000629136 IGKV6D-41A0A0C4DH26 115 aa12.87□□□□□ -0.35
CHD2-217ENST00000629136 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
CHD2-217ENST00000629136 PRDM1O75626 825 aa12.87□□□□□ -0.35
CHD2-217ENST00000629136 HMGCRP04035 888 aa12.87□□□□□ -0.35
CHD2-217ENST00000629136 APPP05067 770 aa12.87□□□□□ -0.35
CHD2-217ENST00000629136 COG2Q14746 738 aa12.87□□□□□ -0.35
CHD2-217ENST00000629136 MORN1Q5T089 497 aa12.87□□□□□ -0.35
CHD2-217ENST00000629136 PRPF38BQ5VTL8 546 aaKnown RBP12.87□□□□□ -0.35
CHD2-217ENST00000629136 CHD1LQ86WJ1 897 aa12.87□□□□□ -0.35
CHD2-217ENST00000629136 U2AF1L4Q8WU68 220 aaKnown RBP12.87□□□□□ -0.35
CHD2-217ENST00000629136 NUDT12Q9BQG2 462 aa12.87□□□□□ -0.35
CHD2-217ENST00000629136 NAPBQ9H115 298 aa12.87□□□□□ -0.35
CHD2-217ENST00000629136 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
CHD2-217ENST00000629136 PAK6Q9NQU5 681 aaPredicted RBP12.87□□□□□ -0.35
CHD2-217ENST00000629136 A0A0D9SFI3 127 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 CYP2B6P20813 491 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 DSG3P32926 999 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 CCNA1P78396 465 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 ATP2B2Q01814 1243 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 NUCB1Q02818 461 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 VPS53Q5VIR6 699 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 PLEKHH3Q7Z736 793 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 UBE2Q1Q7Z7E8 422 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 PLEKHM2Q8IWE5 1019 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 ATG4CQ96DT6 458 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 FAM227BQ96M60 508 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 NACAP1Q9BZK3 213 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 OSBPL3Q9H4L5 887 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 MKNK2Q9HBH9 465 aa12.86□□□□□ -0.35
CHD2-217ENST00000629136 FLOT1O75955 427 aa12.85□□□□□ -0.35
CHD2-217ENST00000629136 SGPL1O95470 568 aa12.85□□□□□ -0.35
CHD2-217ENST00000629136 XRCC5P13010 732 aaKnown RBP12.85□□□□□ -0.35
CHD2-217ENST00000629136 PPARAQ07869 468 aa12.85□□□□□ -0.35
CHD2-217ENST00000629136 CCL14Q16627 93 aa12.85□□□□□ -0.35
CHD2-217ENST00000629136 MAP3K21Q5TCX8 1036 aa12.85□□□□□ -0.35
CHD2-217ENST00000629136 APBA2Q99767 749 aa12.85□□□□□ -0.35
CHD2-217ENST00000629136 SPATC1LQ9H0A9 340 aa12.85□□□□□ -0.35
CHD2-217ENST00000629136 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.85□□□□□ -0.351e-7■■□□□ 12.5
CHD2-217ENST00000629136 HELLSQ9NRZ9 838 aa12.85□□□□□ -0.35
CHD2-217ENST00000629136 NYAP2Q9P242 653 aa12.85□□□□□ -0.35
CHD2-217ENST00000629136 PTPREP23469 700 aa12.84□□□□□ -0.35
CHD2-217ENST00000629136 RGS2P41220 211 aa12.84□□□□□ -0.35
CHD2-217ENST00000629136 IRX6P78412 446 aaPredicted RBP12.84□□□□□ -0.35
CHD2-217ENST00000629136 MAP2K5Q13163 448 aa12.84□□□□□ -0.35
CHD2-217ENST00000629136 NMIQ13287 307 aaPredicted RBP12.84□□□□□ -0.35
CHD2-217ENST00000629136 GRB14Q14449 540 aa12.84□□□□□ -0.35
CHD2-217ENST00000629136 FAM83BQ5T0W9 1011 aa12.84□□□□□ -0.35
CHD2-217ENST00000629136 ZNF589Q86UQ0 364 aaPredicted RBP12.84□□□□□ -0.35
CHD2-217ENST00000629136 CCAR1Q8IX12 1150 aaKnown RBP12.84□□□□□ -0.35
CHD2-217ENST00000629136 CEP95Q96GE4 821 aa12.84□□□□□ -0.35
CHD2-217ENST00000629136 DEFB118Q96PH6 123 aa12.84□□□□□ -0.35
CHD2-217ENST00000629136 MOV10L1Q9BXT6 1211 aaKnown RBP12.84□□□□□ -0.35
CHD2-217ENST00000629136 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
CHD2-217ENST00000629136 FBXO28Q9NVF7 368 aa12.84□□□□□ -0.35
CHD2-217ENST00000629136 HOXC10Q9NYD6 342 aa12.84□□□□□ -0.35
CHD2-217ENST00000629136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
CHD2-217ENST00000629136 TACC3Q9Y6A5 838 aa12.84□□□□□ -0.35
CHD2-217ENST00000629136 RPTORQ8N122 1335 aa12.84□□□□□ -0.35
CHD2-217ENST00000629136 SLC15A5A6NIM6 579 aa12.83□□□□□ -0.36
CHD2-217ENST00000629136 TRIM6-TRIM34B2RNG4 842 aa12.83□□□□□ -0.36
CHD2-217ENST00000629136 ZKSCAN1P17029 563 aaPredicted RBP12.83□□□□□ -0.36
CHD2-217ENST00000629136 CTDSPL2Q05D32 466 aa12.83□□□□□ -0.36
CHD2-217ENST00000629136 WDR78Q5VTH9 848 aa12.83□□□□□ -0.36
CHD2-217ENST00000629136 TICAM2Q86XR7 235 aa12.83□□□□□ -0.36
CHD2-217ENST00000629136 MB21D1Q8N884 522 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms