RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 BICDL2A1A5D9 508 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 ZYXQ15942 572 aaKnown RBP11.64□□□□□ -0.55
COL25A1-209ENST00000622134 TDRD12Q587J7 1177 aaKnown RBP11.64□□□□□ -0.55
COL25A1-209ENST00000622134 CDC37L1Q7L3B6 337 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 FCHSD1Q86WN1 690 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 RNF168Q8IYW5 571 aaPredicted RBP11.64□□□□□ -0.55
COL25A1-209ENST00000622134 PAGR1Q9BTK6 254 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 AKR1B15C9JRZ8 316 aaPredicted RBP11.63□□□□□ -0.55
COL25A1-209ENST00000622134 CCDC38Q502W7 563 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 ADD3Q9UEY8 706 aaKnown RBP11.63□□□□□ -0.55
COL25A1-209ENST00000622134 LUC7L2Q9Y383 392 aaKnown RBP11.63□□□□□ -0.55
COL25A1-209ENST00000622134 LMTK2Q8IWU2 1503 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 TCP10L2B9ZVM9 353 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 LRMPQ12912 555 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 PPFIBP2Q8ND30 876 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 TNNQ9UQP3 1299 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 ZNF532Q9HCE3 1301 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 KIF5AQ12840 1032 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 STRN3Q13033 797 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 RILPL1Q5EBL4 403 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 RC3H1Q5TC82 1133 aaKnown RBP11.63□□□□□ -0.55
COL25A1-209ENST00000622134 TSHZ3Q63HK5 1081 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 ISM2Q6H9L7 571 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 TRIM6Q9C030 488 aaPredicted RBP11.63□□□□□ -0.55
COL25A1-209ENST00000622134 COPRSQ9NQ92 184 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 ZBTB7BO15156 539 aaPredicted RBP11.63□□□□□ -0.55
COL25A1-209ENST00000622134 PCK1P35558 622 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 BTDP43251 543 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 ICA1Q05084 483 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 RSPH3Q86UC2 560 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 HOOK3Q86VS8 718 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 MICAL1Q8TDZ2 1067 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 SPAG5Q96R06 1193 aa11.63□□□□□ -0.55
COL25A1-209ENST00000622134 FEZ2Q9UHY8 353 aaPredicted RBP11.63□□□□□ -0.55
COL25A1-209ENST00000622134 H0YCG3 227 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 PRPHP41219 470 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 TSNAXIP1Q2TAA8 658 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 APOBEC3FQ8IUX4 373 aaKnown RBP11.62□□□□□ -0.55
COL25A1-209ENST00000622134 USP31Q70CQ4 1352 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 MYCLP12524 364 aaPredicted RBP11.62□□□□□ -0.55
COL25A1-209ENST00000622134 ABCB5Q2M3G0 1257 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 PODNQ7Z5L7 613 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 DDX12PQ92771 950 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 DSCC1Q9BVC3 393 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 AP5M1Q9H0R1 490 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 RTEL1Q9NZ71 1219 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 ODF2LQ9ULJ1 636 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 PPFIA4O75335 1185 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 LUC7L3O95232 432 aaKnown RBP11.62□□□□□ -0.55
COL25A1-209ENST00000622134 TFAP4Q01664 338 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 NONOQ15233 471 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL25A1-209ENST00000622134 WHAMMP3Q1A5X7 153 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 OTUD6AQ7L8S5 288 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 KRT26Q7Z3Y9 468 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 DPP9Q86TI2 863 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 ANKRD35Q8N283 1001 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 JPH2Q9BR39 696 aaPredicted RBP11.62□□□□□ -0.55
COL25A1-209ENST00000622134 ARHGEF35A5YM69 484 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 KIF3CO14782 793 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 SPTLC2O15270 562 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 PNMA6AP0CW24 399 aaPredicted RBP11.62□□□□□ -0.55
COL25A1-209ENST00000622134 GBP1P32455 592 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 FAM182BQ5T319 152 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 IQUBQ8NA54 791 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 LLPHQ9BRT6 129 aaKnown RBP11.62□□□□□ -0.55
COL25A1-209ENST00000622134 TRIM7Q9C029 511 aa11.62□□□□□ -0.55
COL25A1-209ENST00000622134 GEMIN8Q9NWZ8 242 aaKnown RBP11.62□□□□□ -0.55
COL25A1-209ENST00000622134 AKR1B10O60218 316 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 CHMLP26374 656 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 ZAP70P43403 619 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 FANCCQ00597 558 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 SNCBQ16143 134 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 E2F4Q16254 413 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 FBXO38Q6PIJ6 1188 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 NLRP10Q86W26 655 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 BCAS4Q8TDM0 211 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 FBXO41Q8TF61 875 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 IWS1Q96ST2 819 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 RNF181Q9P0P0 153 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 GOLGA8KD6RF30 607 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 FOSP01100 380 aaPredicted RBP11.61□□□□□ -0.55
COL25A1-209ENST00000622134 USP17L8P0C7I0 530 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 SEPT6Q14141 434 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 ELMSAN1Q6PJG2 1045 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 DAAM2Q86T65 1068 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 CCDC97Q96F63 343 aaPredicted RBP11.61□□□□□ -0.55
COL25A1-209ENST00000622134 BRIP1Q9BX63 1249 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 RABGAP1Q9Y3P9 1069 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 ZBTB7AO95365 584 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 CLCN6P51797 869 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 UBE3CQ15386 1083 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 AKNAD1Q5T1N1 836 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 RAB11FIP4Q86YS3 637 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 MLXIPQ9HAP2 919 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 STIM2Q9P246 746 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 GUCA1BQ9UMX6 200 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 CCDC151A5D8V7 595 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 SP4Q02446 784 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 SH2D4BQ5SQS7 431 aa11.61□□□□□ -0.55
COL25A1-209ENST00000622134 GPATCH4Q5T3I0 446 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms