RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 LBX2Q6XYB7 198 aa21.48■■□□□ 1.03
SCAMP4-213ENST00000621748 SHISA4Q96DD7 197 aa21.48■■□□□ 1.03
SCAMP4-213ENST00000621748 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.48■■□□□ 1.03
SCAMP4-213ENST00000621748 UNC93B1Q9H1C4 597 aa21.48■■□□□ 1.03
SCAMP4-213ENST00000621748 RLFQ13129 1914 aa21.47■■□□□ 1.03
SCAMP4-213ENST00000621748 GJB1P08034 283 aa21.47■■□□□ 1.03
SCAMP4-213ENST00000621748 EEF2P13639 858 aaKnown RBP21.47■■□□□ 1.03
SCAMP4-213ENST00000621748 MAPK4P31152 587 aa21.47■■□□□ 1.03
SCAMP4-213ENST00000621748 TDO2P48775 406 aa21.47■■□□□ 1.03
SCAMP4-213ENST00000621748 EVI5LQ96CN4 794 aa21.47■■□□□ 1.03
SCAMP4-213ENST00000621748 BTBD7Q9P203 1132 aa21.47■■□□□ 1.03
SCAMP4-213ENST00000621748 ROBO3Q96MS0 1386 aa21.47■■□□□ 1.03
SCAMP4-213ENST00000621748 RASA1P20936 1047 aa21.46■■□□□ 1.03
SCAMP4-213ENST00000621748 COG2Q14746 738 aa21.46■■□□□ 1.03
SCAMP4-213ENST00000621748 CCDC129Q6ZRS4 1044 aa21.46■■□□□ 1.03
SCAMP4-213ENST00000621748 SPICE1Q8N0Z3 855 aa21.46■■□□□ 1.03
SCAMP4-213ENST00000621748 VCPKMTQ9H867 229 aa21.46■■□□□ 1.03
SCAMP4-213ENST00000621748 KANSL2Q9H9L4 492 aa21.46■■□□□ 1.03
SCAMP4-213ENST00000621748 MKNK2Q9HBH9 465 aa21.46■■□□□ 1.03
SCAMP4-213ENST00000621748 GREB1LQ9C091 1923 aaPredicted RBP21.46■■□□□ 1.03
SCAMP4-213ENST00000621748 CYP2B6P20813 491 aa21.45■■□□□ 1.02
SCAMP4-213ENST00000621748 GJA8P48165 433 aa21.45■■□□□ 1.02
SCAMP4-213ENST00000621748 ATP2B2Q01814 1243 aa21.45■■□□□ 1.02
SCAMP4-213ENST00000621748 GPR142Q7Z601 462 aa21.45■■□□□ 1.02
SCAMP4-213ENST00000621748 CCAR1Q8IX12 1150 aaKnown RBP21.45■■□□□ 1.02
SCAMP4-213ENST00000621748 LPAR1Q92633 364 aa21.45■■□□□ 1.02
SCAMP4-213ENST00000621748 NUDT12Q9BQG2 462 aa21.45■■□□□ 1.02
SCAMP4-213ENST00000621748 TANGO6Q9C0B7 1094 aa21.45■■□□□ 1.02
SCAMP4-213ENST00000621748 SH2D4AQ9H788 454 aa21.45■■□□□ 1.02
SCAMP4-213ENST00000621748 FOXP2O15409 715 aa21.44■■□□□ 1.02
SCAMP4-213ENST00000621748 PLEKHH3Q7Z736 793 aa21.44■■□□□ 1.02
SCAMP4-213ENST00000621748 USP6NLQ92738 828 aa21.44■■□□□ 1.02
SCAMP4-213ENST00000621748 NACAP1Q9BZK3 213 aa21.44■■□□□ 1.02
SCAMP4-213ENST00000621748 HOXC10Q9NYD6 342 aa21.44■■□□□ 1.02
SCAMP4-213ENST00000621748 PRDM1O75626 825 aa21.43■■□□□ 1.02
SCAMP4-213ENST00000621748 CCNA1P78396 465 aa21.43■■□□□ 1.02
SCAMP4-213ENST00000621748 NUCB1Q02818 461 aa21.43■■□□□ 1.02
SCAMP4-213ENST00000621748 TRIM32Q13049 653 aa21.43■■□□□ 1.02
SCAMP4-213ENST00000621748 MORN1Q5T089 497 aa21.43■■□□□ 1.02
SCAMP4-213ENST00000621748 CHD1LQ86WJ1 897 aa21.43■■□□□ 1.02
SCAMP4-213ENST00000621748 NKX2-3Q8TAU0 364 aa21.43■■□□□ 1.02
SCAMP4-213ENST00000621748 U2AF1L4Q8WU68 220 aaKnown RBP21.43■■□□□ 1.02
SCAMP4-213ENST00000621748 SOCS4Q8WXH5 440 aa21.43■■□□□ 1.02
SCAMP4-213ENST00000621748 TRIB2Q92519 343 aa21.43■■□□□ 1.02
SCAMP4-213ENST00000621748 NAPBQ9H115 298 aa21.43■■□□□ 1.02
SCAMP4-213ENST00000621748 HMGCRP04035 888 aa21.42■■□□□ 1.02
SCAMP4-213ENST00000621748 XRCC5P13010 732 aaKnown RBP21.42■■□□□ 1.02
SCAMP4-213ENST00000621748 DSG3P32926 999 aa21.42■■□□□ 1.02
SCAMP4-213ENST00000621748 PARP14Q460N5 1801 aa21.42■■□□□ 1.02
SCAMP4-213ENST00000621748 PRPF38BQ5VTL8 546 aaKnown RBP21.42■■□□□ 1.02
SCAMP4-213ENST00000621748 PLEKHM2Q8IWE5 1019 aa21.42■■□□□ 1.02
SCAMP4-213ENST00000621748 PAK6Q9NQU5 681 aaPredicted RBP21.42■■□□□ 1.02
SCAMP4-213ENST00000621748 WDR46O15213 610 aaKnown RBP21.41■■□□□ 1.02
SCAMP4-213ENST00000621748 FLOT1O75955 427 aa21.41■■□□□ 1.02
SCAMP4-213ENST00000621748 SGPL1O95470 568 aa21.41■■□□□ 1.02
SCAMP4-213ENST00000621748 VPS53Q5VIR6 699 aa21.41■■□□□ 1.02
SCAMP4-213ENST00000621748 ZNF444Q8N0Y2 327 aaPredicted RBP21.41■■□□□ 1.02
SCAMP4-213ENST00000621748 FAM227BQ96M60 508 aa21.41■■□□□ 1.02
SCAMP4-213ENST00000621748 DEFB118Q96PH6 123 aa21.41■■□□□ 1.02
SCAMP4-213ENST00000621748 IGKV6D-41A0A0C4DH26 115 aa21.4■■□□□ 1.02
SCAMP4-213ENST00000621748 PPARAQ07869 468 aa21.4■■□□□ 1.02
SCAMP4-213ENST00000621748 WDR78Q5VTH9 848 aa21.4■■□□□ 1.02
SCAMP4-213ENST00000621748 ATG4CQ96DT6 458 aa21.4■■□□□ 1.02
SCAMP4-213ENST00000621748 ZNF287Q9HBT7 754 aa21.4■■□□□ 1.02
SCAMP4-213ENST00000621748 CWC22Q9HCG8 908 aaKnown RBP21.4■■□□□ 1.02
SCAMP4-213ENST00000621748 HELLSQ9NRZ9 838 aa21.4■■□□□ 1.02
SCAMP4-213ENST00000621748 NYAP2Q9P242 653 aa21.4■■□□□ 1.02
SCAMP4-213ENST00000621748 A0A0G2JMZ2 1700 aa21.4■■□□□ 1.02
SCAMP4-213ENST00000621748 A0A0D9SFI3 127 aa21.39■■□□□ 1.01
SCAMP4-213ENST00000621748 TRIM6-TRIM34B2RNG4 842 aa21.39■■□□□ 1.01
SCAMP4-213ENST00000621748 PTPREP23469 700 aa21.39■■□□□ 1.01
SCAMP4-213ENST00000621748 RGS2P41220 211 aa21.39■■□□□ 1.01
SCAMP4-213ENST00000621748 MAP2K5Q13163 448 aa21.39■■□□□ 1.01
SCAMP4-213ENST00000621748 CCL14Q16627 93 aa21.39■■□□□ 1.01
SCAMP4-213ENST00000621748 UBE2Q1Q7Z7E8 422 aa21.39■■□□□ 1.01
SCAMP4-213ENST00000621748 MOV10L1Q9BXT6 1211 aaKnown RBP21.39■■□□□ 1.01
SCAMP4-213ENST00000621748 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.39■■□□□ 1.017e-7■■■□□ 15.6
SCAMP4-213ENST00000621748 OSBPL3Q9H4L5 887 aa21.39■■□□□ 1.01
SCAMP4-213ENST00000621748 GOPCQ9HD26 462 aa21.39■■□□□ 1.01
SCAMP4-213ENST00000621748 FBXO28Q9NVF7 368 aa21.39■■□□□ 1.01
SCAMP4-213ENST00000621748 MYH4Q9Y623 1939 aa21.39■■□□□ 1.01
SCAMP4-213ENST00000621748 RAD21O60216 631 aa21.38■■□□□ 1.01
SCAMP4-213ENST00000621748 FAM83BQ5T0W9 1011 aa21.38■■□□□ 1.01
SCAMP4-213ENST00000621748 SAMD1Q6SPF0 538 aaPredicted RBP21.38■■□□□ 1.01
SCAMP4-213ENST00000621748 MB21D1Q8N884 522 aa21.38■■□□□ 1.01
SCAMP4-213ENST00000621748 RILPL2Q969X0 211 aa21.38■■□□□ 1.01
SCAMP4-213ENST00000621748 SPATC1LQ9H0A9 340 aa21.38■■□□□ 1.01
SCAMP4-213ENST00000621748 CLIP2Q9UDT6 1046 aa21.38■■□□□ 1.01
SCAMP4-213ENST00000621748 RPTORQ8N122 1335 aa21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 COL11A1P12107 1806 aaPredicted RBP21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 SLC15A5A6NIM6 579 aa21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 TFRCP02786 760 aaKnown RBP21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 PDE4BQ07343 736 aa21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 NMIQ13287 307 aaPredicted RBP21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 MCMDC2Q4G0Z9 681 aa21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 FAM47AQ5JRC9 791 aa21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 MAP3K21Q5TCX8 1036 aa21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 TICAM2Q86XR7 235 aa21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 CEP95Q96GE4 821 aa21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 APBA2Q99767 749 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms