RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 CCNA1P78396 465 aa20.35■□□□□ 0.85
TARDBP-225ENST00000621715 MFSD14CQ5VZR4 134 aa20.35■□□□□ 0.85
TARDBP-225ENST00000621715 ANO1Q5XXA6 986 aa20.35■□□□□ 0.85
TARDBP-225ENST00000621715 MYH8P13535 1937 aa20.35■□□□□ 0.85
TARDBP-225ENST00000621715 SPTBN5Q9NRC6 3674 aaKnown RBP20.34■□□□□ 0.85
TARDBP-225ENST00000621715 COBLO75128 1261 aa20.34■□□□□ 0.85
TARDBP-225ENST00000621715 CNGA1P29973 690 aa20.34■□□□□ 0.85
TARDBP-225ENST00000621715 ATP2B2Q01814 1243 aa20.34■□□□□ 0.85
TARDBP-225ENST00000621715 LCORLQ8N3X6 602 aa20.34■□□□□ 0.85
TARDBP-225ENST00000621715 LPAR1Q92633 364 aa20.34■□□□□ 0.85
TARDBP-225ENST00000621715 COL11A1P12107 1806 aaPredicted RBP20.34■□□□□ 0.85
TARDBP-225ENST00000621715 ZNFX1Q9P2E3 1918 aaKnown RBP20.33■□□□□ 0.85
TARDBP-225ENST00000621715 ZNF532Q9HCE3 1301 aa20.33■□□□□ 0.85
TARDBP-225ENST00000621715 GLRX3O76003 335 aaKnown RBP20.33■□□□□ 0.85
TARDBP-225ENST00000621715 POLR3DP05423 398 aaPredicted RBP20.33■□□□□ 0.85
TARDBP-225ENST00000621715 ADORA2AP29274 412 aa20.33■□□□□ 0.85
TARDBP-225ENST00000621715 GJC2Q5T442 439 aaPredicted RBP20.33■□□□□ 0.85
TARDBP-225ENST00000621715 SLC9C2Q5TAH2 1124 aa20.33■□□□□ 0.85
TARDBP-225ENST00000621715 CERS3Q8IU89 383 aa20.33■□□□□ 0.85
TARDBP-225ENST00000621715 DYNLL2Q96FJ2 89 aa20.33■□□□□ 0.85
TARDBP-225ENST00000621715 GUCD1Q96NT3 240 aa20.33■□□□□ 0.85
TARDBP-225ENST00000621715 CABP5Q9NP86 173 aa20.33■□□□□ 0.85
TARDBP-225ENST00000621715 DCP1AQ9NPI6 582 aaPredicted RBP20.33■□□□□ 0.85
TARDBP-225ENST00000621715 MCM9Q9NXL9 1143 aa20.33■□□□□ 0.85
TARDBP-225ENST00000621715 SMCHD1A6NHR9 2005 aa20.32■□□□□ 0.84
TARDBP-225ENST00000621715 PRKAB2O43741 272 aa20.32■□□□□ 0.84
TARDBP-225ENST00000621715 PRAMEF19Q5SWL8 479 aa20.32■□□□□ 0.84
TARDBP-225ENST00000621715 RHPN1Q8TCX5 695 aa20.32■□□□□ 0.84
TARDBP-225ENST00000621715 CYP2D7A0A087X1C5 515 aa20.31■□□□□ 0.84
TARDBP-225ENST00000621715 POTEB2H3BUK9 544 aa20.31■□□□□ 0.84
TARDBP-225ENST00000621715 DNM1LO00429 736 aa20.31■□□□□ 0.84
TARDBP-225ENST00000621715 GOLIM4O00461 696 aa20.31■□□□□ 0.84
TARDBP-225ENST00000621715 MPHOSPH10O00566 681 aaKnown RBP20.31■□□□□ 0.84
TARDBP-225ENST00000621715 ERCC3P19447 782 aa20.31■□□□□ 0.84
TARDBP-225ENST00000621715 RTP1P59025 263 aa20.31■□□□□ 0.84
TARDBP-225ENST00000621715 COG2Q14746 738 aa20.31■□□□□ 0.84
TARDBP-225ENST00000621715 SIRT2Q8IXJ6 389 aa20.31■□□□□ 0.84
TARDBP-225ENST00000621715 SPATC1LQ9H0A9 340 aa20.31■□□□□ 0.84
TARDBP-225ENST00000621715 IVNS1ABPQ9Y6Y0 642 aa20.31■□□□□ 0.84
TARDBP-225ENST00000621715 APBB1O00213 710 aa20.3■□□□□ 0.84
TARDBP-225ENST00000621715 AKR1B1P15121 316 aa20.3■□□□□ 0.84
TARDBP-225ENST00000621715 HNRNPUQ00839 825 aaKnown RBP eCLIP20.3■□□□□ 0.84
TARDBP-225ENST00000621715 SPICE1Q8N0Z3 855 aa20.3■□□□□ 0.84
TARDBP-225ENST00000621715 FAM161BQ96MY7 647 aa20.3■□□□□ 0.84
TARDBP-225ENST00000621715 DNAJC2Q99543 621 aaKnown RBP20.3■□□□□ 0.84
TARDBP-225ENST00000621715 CRNKL1Q9BZJ0 848 aaKnown RBP20.3■□□□□ 0.84
TARDBP-225ENST00000621715 TANGO6Q9C0B7 1094 aa20.3■□□□□ 0.84
TARDBP-225ENST00000621715 ARMT1Q9H993 441 aa20.3■□□□□ 0.84
TARDBP-225ENST00000621715 OLFML2BQ68BL8 750 aa20.29■□□□□ 0.84
TARDBP-225ENST00000621715 ERC1Q8IUD2 1116 aa20.29■□□□□ 0.84
TARDBP-225ENST00000621715 ATG4CQ96DT6 458 aa20.29■□□□□ 0.84
TARDBP-225ENST00000621715 MSCO60682 206 aa20.28■□□□□ 0.84
TARDBP-225ENST00000621715 DSG3P32926 999 aa20.28■□□□□ 0.84
TARDBP-225ENST00000621715 TMED8Q6PL24 325 aaPredicted RBP20.28■□□□□ 0.84
TARDBP-225ENST00000621715 DPP9Q86TI2 863 aa20.28■□□□□ 0.84
TARDBP-225ENST00000621715 BCL11AQ9H165 835 aa20.28■□□□□ 0.84
TARDBP-225ENST00000621715 ATP11BQ9Y2G3 1177 aa20.28■□□□□ 0.84
TARDBP-225ENST00000621715 TTF1Q15361 905 aaPredicted RBP20.27■□□□□ 0.84
TARDBP-225ENST00000621715 C9orf50Q5SZB4 431 aa20.27■□□□□ 0.84
TARDBP-225ENST00000621715 SLC39A5Q6ZMH5 540 aa20.27■□□□□ 0.84
TARDBP-225ENST00000621715 TMEM179Q6ZVK1 233 aa20.27■□□□□ 0.84
TARDBP-225ENST00000621715 SH3RF1Q7Z6J0 888 aa20.27■□□□□ 0.84
TARDBP-225ENST00000621715 HOXC10Q9NYD6 342 aa20.27■□□□□ 0.84
TARDBP-225ENST00000621715 PLXNA1Q9UIW2 1896 aa20.26■□□□□ 0.83
TARDBP-225ENST00000621715 MYH7P12883 1935 aa20.26■□□□□ 0.83
TARDBP-225ENST00000621715 TMEM132BQ14DG7 1078 aa20.26■□□□□ 0.83
TARDBP-225ENST00000621715 SHHQ15465 462 aa20.26■□□□□ 0.83
TARDBP-225ENST00000621715 TRIM60Q495X7 471 aa20.26■□□□□ 0.83
TARDBP-225ENST00000621715 FAM47AQ5JRC9 791 aa20.26■□□□□ 0.83
TARDBP-225ENST00000621715 SHCBP1Q8NEM2 672 aa20.26■□□□□ 0.83
TARDBP-225ENST00000621715 FBXO28Q9NVF7 368 aa20.26■□□□□ 0.83
TARDBP-225ENST00000621715 TMX2Q9Y320 296 aa20.26■□□□□ 0.83
TARDBP-225ENST00000621715 SEPT4O43236 478 aa20.25■□□□□ 0.83
TARDBP-225ENST00000621715 STRNO43815 780 aa20.25■□□□□ 0.83
TARDBP-225ENST00000621715 FLOT1O75955 427 aa20.25■□□□□ 0.83
TARDBP-225ENST00000621715 MBD4O95243 580 aa20.25■□□□□ 0.83
TARDBP-225ENST00000621715 ADD2P35612 726 aa20.25■□□□□ 0.83
TARDBP-225ENST00000621715 PLS1Q14651 629 aa20.25■□□□□ 0.83
TARDBP-225ENST00000621715 SNX17Q15036 470 aa20.25■□□□□ 0.83
TARDBP-225ENST00000621715 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
TARDBP-225ENST00000621715 NCAPG2Q86XI2 1143 aa20.25■□□□□ 0.83
TARDBP-225ENST00000621715 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.25■□□□□ 0.83
TARDBP-225ENST00000621715 FERMT2Q96AC1 680 aa20.25■□□□□ 0.83
TARDBP-225ENST00000621715 MAML3Q96JK9 1138 aa20.25■□□□□ 0.83
TARDBP-225ENST00000621715 LBHD1Q9BQE6 289 aaPredicted RBP20.25■□□□□ 0.83
TARDBP-225ENST00000621715 TRIM43BA6NCK2 446 aa20.24■□□□□ 0.83
TARDBP-225ENST00000621715 MYCNP04198 464 aaPredicted RBP20.24■□□□□ 0.83
TARDBP-225ENST00000621715 ITGB8P26012 769 aa20.24■□□□□ 0.83
TARDBP-225ENST00000621715 ADCYAP1R1P41586 468 aa20.24■□□□□ 0.83
TARDBP-225ENST00000621715 ICA1Q05084 483 aa20.24■□□□□ 0.83
TARDBP-225ENST00000621715 LRRC41Q15345 812 aa20.24■□□□□ 0.83
TARDBP-225ENST00000621715 FAM109BQ6ICB4 259 aaPredicted RBP20.24■□□□□ 0.83
TARDBP-225ENST00000621715 TRIM43Q96BQ3 446 aaPredicted RBP20.24■□□□□ 0.83
TARDBP-225ENST00000621715 COL25A1Q9BXS0 654 aaPredicted RBP20.24■□□□□ 0.83
TARDBP-225ENST00000621715 BOLA2Q9H3K6 86 aa20.24■□□□□ 0.83
TARDBP-225ENST00000621715 VCPKMTQ9H867 229 aa20.24■□□□□ 0.83
TARDBP-225ENST00000621715 PDLIM7Q9NR12 457 aa20.24■□□□□ 0.83
TARDBP-225ENST00000621715 GREB1LQ9C091 1923 aaPredicted RBP20.23■□□□□ 0.83
TARDBP-225ENST00000621715 PGK2P07205 417 aa20.23■□□□□ 0.83
TARDBP-225ENST00000621715 TAL1P17542 331 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms