RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 TAF7Q15545 349 aaPredicted RBP13.67□□□□□ -0.22
MATR3-227ENST00000618441 CHRNA2Q15822 529 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 DDX46Q7L014 1031 aaKnown RBP13.67□□□□□ -0.22
MATR3-227ENST00000618441 FAM228AQ86W67 206 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 SMYD4Q8IYR2 804 aaPredicted RBP13.67□□□□□ -0.22
MATR3-227ENST00000618441 MAP4K1Q92918 833 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 HVCN1Q96D96 273 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 FAM184BQ9ULE4 1060 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 DBN1Q16643 649 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 TTMPQ5BVD1 217 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 EZH1Q92800 747 aaPredicted RBP13.67□□□□□ -0.22
MATR3-227ENST00000618441 SPOCK3Q9BQ16 436 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 USP44Q9H0E7 712 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 DMGDHQ9UI17 866 aaKnown RBP13.67□□□□□ -0.22
MATR3-227ENST00000618441 EVI5O60447 810 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 RASSF9O75901 435 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 CTCFP49711 727 aaPredicted RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 PAPOLAP51003 745 aaKnown RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 HAND2P61296 217 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 MKRN3Q13064 507 aaKnown RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 ANO1Q5XXA6 986 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 SPATS2Q86XZ4 545 aaKnown RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 FAM210AQ96ND0 272 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 LRRC1Q9BTT6 524 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 SBNO2Q9Y2G9 1366 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 DNM1LO00429 736 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 RXRAP19793 462 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 SPRED3Q2MJR0 410 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 RRP12Q5JTH9 1297 aaKnown RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 NUTM2AQ8IVF1 878 aaPredicted RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 NME8Q8N427 588 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 TSEN2Q8NCE0 465 aaKnown RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 STAMQ92783 540 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 C19orf44Q9H6X5 657 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 GPHNQ9NQX3 736 aaPredicted RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 IQSEC3Q9UPP2 1182 aaPredicted RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 SMIM23A6NLE4 172 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 SHOX2O60902 331 aaPredicted RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 GIGYF1O75420 1035 aaPredicted RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 SETSIPP0DME0 302 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 ATF3P18847 181 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 TPP2P29144 1249 aaPredicted RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 INF2Q27J81 1249 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 ARHGEF25Q86VW2 580 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 CCDC47Q96A33 483 aaKnown RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 OSBPL1AQ9BXW6 950 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 PHAXQ9H814 394 aaKnown RBP13.66□□□□□ -0.22
MATR3-227ENST00000618441 EHD2Q9NZN4 543 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 MYO1AQ9UBC5 1043 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 TBX22Q9Y458 520 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 MAP3K19Q56UN5 1328 aa13.66□□□□□ -0.22
MATR3-227ENST00000618441 PREX1Q8TCU6 1659 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 A0A1B0GVG6 124 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 CARNS1A5YM72 827 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 PYGBP11216 843 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 TAF11Q15544 211 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 WDR93Q6P2C0 686 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 CYFIP2Q96F07 1278 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 EEF2KMTQ96G04 330 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 ZIM3Q96PE6 472 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 MAPK8IP1Q9UQF2 711 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 RCSD1Q6JBY9 416 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 NAA16Q6N069 864 aaPredicted RBP13.65□□□□□ -0.22
MATR3-227ENST00000618441 MSL3Q8N5Y2 521 aaKnown RBP13.65□□□□□ -0.22
MATR3-227ENST00000618441 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
MATR3-227ENST00000618441 TEX13AQ9BXU3 409 aaPredicted RBP13.65□□□□□ -0.22
MATR3-227ENST00000618441 CCDC113Q9H0I3 377 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 PTPRMP28827 1452 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 PHF20L1A8MW92 1017 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 SCTRP47872 440 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 KRT32Q14532 448 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 PTGISQ16647 500 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 CUL5Q93034 780 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 TSPAN18Q96SJ8 248 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 HSD3B7Q9H2F3 369 aa13.65□□□□□ -0.22
MATR3-227ENST00000618441 SETD1BQ9UPS6 1966 aaKnown RBP13.65□□□□□ -0.22
MATR3-227ENST00000618441 CASP1P29466 404 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 FXR1P51114 621 aaKnown RBP eCLIP13.64□□□□□ -0.237e-7■■□□□ 11.6
MATR3-227ENST00000618441 TUBB2AQ13885 445 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 CHP1Q99653 195 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 BPIFA3Q9BQP9 254 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 TUBB2BQ9BVA1 445 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 NUP58Q9BVL2 599 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 MYL6BP14649 208 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 VAV2P52735 878 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 IQCEQ6IPM2 695 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 ACTR5Q9H9F9 607 aaPredicted RBP13.64□□□□□ -0.23
MATR3-227ENST00000618441 BSDC1Q9NW68 430 aaPredicted RBP13.64□□□□□ -0.23
MATR3-227ENST00000618441 TAB2Q9NYJ8 693 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 RTEL1Q9NZ71 1219 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 QRICH2Q9H0J4 1663 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 RGL2O15211 777 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 ATP6V1G2O95670 118 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 ARHGEF1Q92888 912 aaKnown RBP13.64□□□□□ -0.23
MATR3-227ENST00000618441 NFU1Q9UMS0 254 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 IQGAP1P46940 1657 aa13.64□□□□□ -0.23
MATR3-227ENST00000618441 LRRD1A4D1F6 860 aa13.63□□□□□ -0.23
MATR3-227ENST00000618441 YEATS4O95619 227 aa13.63□□□□□ -0.23
MATR3-227ENST00000618441 NEXNQ0ZGT2 675 aa13.63□□□□□ -0.23
MATR3-227ENST00000618441 INCENPQ9NQS7 918 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms