RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 AATFQ9NY61 560 aaKnown RBP eCLIP16.98■□□□□ 0.31
SRRT-217ENST00000618411 MYO5AQ9Y4I1 1855 aaKnown RBP16.98■□□□□ 0.31
SRRT-217ENST00000618411 AFMP43652 599 aa16.98■□□□□ 0.31
SRRT-217ENST00000618411 DPYDQ12882 1025 aa16.98■□□□□ 0.31
SRRT-217ENST00000618411 ALS2CLQ60I27 953 aa16.98■□□□□ 0.31
SRRT-217ENST00000618411 YTHDF3Q7Z739 585 aaKnown RBP16.98■□□□□ 0.31
SRRT-217ENST00000618411 CAGE1Q8TC20 777 aa16.98■□□□□ 0.31
SRRT-217ENST00000618411 IGDCC4Q8TDY8 1250 aa16.98■□□□□ 0.31
SRRT-217ENST00000618411 JPH2Q9BR39 696 aaPredicted RBP16.98■□□□□ 0.31
SRRT-217ENST00000618411 GNL3LQ9NVN8 582 aaKnown RBP16.98■□□□□ 0.31
SRRT-217ENST00000618411 SAMM50Q9Y512 469 aa16.98■□□□□ 0.31
SRRT-217ENST00000618411 H7C1W4 665 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 CHUKO15111 745 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 KRT86O43790 486 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 CIAO1O76071 339 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 IFNAR1P17181 557 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 KRT83P78385 493 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 SLC39A6Q13433 755 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 NFXL1Q6ZNB6 911 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 SND1Q7KZF4 910 aaKnown RBP eCLIP16.97■□□□□ 0.31
SRRT-217ENST00000618411 KCNH5Q8NCM2 988 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 PAGR1Q9BTK6 254 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 VPS16Q9H269 839 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 C5P01031 1676 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 ZEB2O60315 1214 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 MICALCLQ6ZW33 695 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 MMGT1Q8N4V1 131 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 SENP2Q9HC62 589 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 DENND2AQ9ULE3 1009 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 IQSEC3Q9UPP2 1182 aaPredicted RBP16.97■□□□□ 0.31
SRRT-217ENST00000618411 TBX22Q9Y458 520 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 BCL9LQ86UU0 1499 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 ADAMTS7Q9UKP4 1686 aa16.97■□□□□ 0.31
SRRT-217ENST00000618411 HERVK_113P62684 666 aa16.96■□□□□ 0.31
SRRT-217ENST00000618411 TTF1Q15361 905 aaPredicted RBP16.96■□□□□ 0.31
SRRT-217ENST00000618411 LRRC24Q50LG9 513 aa16.96■□□□□ 0.31
SRRT-217ENST00000618411 RABEP2Q9H5N1 569 aa16.96■□□□□ 0.31
SRRT-217ENST00000618411 UBE2Q2LH0YL09 131 aa16.96■□□□□ 0.31
SRRT-217ENST00000618411 PDE2AO00408 941 aaPredicted RBP16.96■□□□□ 0.31
SRRT-217ENST00000618411 ITIH3Q06033 890 aa16.96■□□□□ 0.31
SRRT-217ENST00000618411 TBC1D10CQ8IV04 446 aa16.96■□□□□ 0.31
SRRT-217ENST00000618411 SMYD4Q8IYR2 804 aaPredicted RBP16.96■□□□□ 0.31
SRRT-217ENST00000618411 DNAJC7Q99615 494 aa16.96■□□□□ 0.31
SRRT-217ENST00000618411 CTNND2Q9UQB3 1225 aa16.96■□□□□ 0.31
SRRT-217ENST00000618411 LIFRP42702 1097 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 NEDD9Q14511 834 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 TCP11X2Q5H9J9 407 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 GIMAP7Q8NHV1 300 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 LY9Q9HBG7 655 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 RWDD2AQ9UIY3 292 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 A0A087X0B3 334 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 MYO1FO00160 1098 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 RDXP35241 583 aaKnown RBP16.95■□□□□ 0.3
SRRT-217ENST00000618411 TSR1Q2NL82 804 aaKnown RBP16.95■□□□□ 0.3
SRRT-217ENST00000618411 TAB2Q9NYJ8 693 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 CEP126Q9P2H0 1117 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 KCNJ14Q9UNX9 436 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 LUC7L2Q9Y383 392 aaKnown RBP16.95■□□□□ 0.3
SRRT-217ENST00000618411 PHRF1Q9P1Y6 1649 aaKnown RBP16.95■□□□□ 0.3
SRRT-217ENST00000618411 TRIM22Q8IYM9 498 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 PLBD2Q8NHP8 589 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 NKX2-3Q8TAU0 364 aa16.95■□□□□ 0.3
SRRT-217ENST00000618411 ABCC12Q96J65 1359 aa16.94■□□□□ 0.3
SRRT-217ENST00000618411 B4E1Z4 1266 aa16.94■□□□□ 0.3
SRRT-217ENST00000618411 MYCNP04198 464 aaPredicted RBP16.94■□□□□ 0.3
SRRT-217ENST00000618411 TMEM67Q5HYA8 995 aa16.94■□□□□ 0.3
SRRT-217ENST00000618411 EMBQ6PCB8 327 aa16.94■□□□□ 0.3
SRRT-217ENST00000618411 KIAA1328Q86T90 577 aa16.94■□□□□ 0.3
SRRT-217ENST00000618411 FNBP4Q8N3X1 1017 aaPredicted RBP16.94■□□□□ 0.3
SRRT-217ENST00000618411 SLC12A7Q9Y666 1083 aa16.94■□□□□ 0.3
SRRT-217ENST00000618411 TTC26A0AVF1 554 aa16.94■□□□□ 0.3
SRRT-217ENST00000618411 KCNJ18B7U540 433 aa16.94■□□□□ 0.3
SRRT-217ENST00000618411 EPHB4P54760 987 aa16.94■□□□□ 0.3
SRRT-217ENST00000618411 KCNJ12Q14500 433 aa16.94■□□□□ 0.3
SRRT-217ENST00000618411 RUFY1Q96T51 708 aa16.94■□□□□ 0.3
SRRT-217ENST00000618411 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
SRRT-217ENST00000618411 CASP1P29466 404 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 GUCY1A2P33402 732 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 UBXN1Q04323 297 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 ZNF572Q7Z3I7 529 aaPredicted RBP16.93■□□□□ 0.3
SRRT-217ENST00000618411 ZNF496Q96IT1 587 aaPredicted RBP16.93■□□□□ 0.3
SRRT-217ENST00000618411 EPSTI1Q96J88 318 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 MYL10Q9BUA6 226 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 SLC52A2Q9HAB3 445 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 EID1Q9Y6B2 187 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 ARFGEF2Q9Y6D5 1785 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 HSF2BPO75031 334 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 SMTNP53814 917 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 C2orf54Q08AI8 447 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 PDCLQ13371 301 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 PLCB4Q15147 1175 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 HSP90AB3PQ58FF7 597 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 TTC19Q6DKK2 380 aaPredicted RBP16.93■□□□□ 0.3
SRRT-217ENST00000618411 ZKSCAN4Q969J2 545 aaPredicted RBP16.93■□□□□ 0.3
SRRT-217ENST00000618411 AIDAQ96BJ3 306 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 ARL8AQ96BM9 186 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 GGA2Q9UJY4 613 aa16.93■□□□□ 0.3
SRRT-217ENST00000618411 ZNF185O15231 689 aa16.92■□□□□ 0.3
SRRT-217ENST00000618411 PAK1Q13153 545 aa16.92■□□□□ 0.3
SRRT-217ENST00000618411 NR5A1Q13285 461 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms