RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 C10orf67Q8IYJ2 551 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 NLGN1Q8N2Q7 840 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 TMTC2Q8N394 836 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 TBC1D16Q8TBP0 767 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 WDR66Q8TBY9 1149 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 TRIM5Q9C035 493 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 PDGFDQ9GZP0 370 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 YY1AP1Q9H869 796 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 BCCIPQ9P287 314 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 ARPP21Q9UBL0 812 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 GGA1Q9UJY5 639 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 USP17L3A6NCW0 530 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 USP17L4A6NCW7 530 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 USP27XA6NNY8 438 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 C6orf229H3BNL8 230 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 TRIM66O15016 1216 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 GYS2P54840 703 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 RCSD1Q6JBY9 416 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 USP17L1Q7RTZ2 530 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 COL23A1Q86Y22 540 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 SRBD1Q8N5C6 995 aaKnown RBP13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 ERO1AQ96HE7 468 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 RTFDC1Q9BY42 306 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 IL17RBQ9NRM6 502 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 GEMIN8Q9NWZ8 242 aaKnown RBP13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 POLR3GO15318 223 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 GTF2A1P52655 376 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 STX1AQ16623 288 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 QSER1Q2KHR3 1735 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 KRBA2Q6ZNG9 492 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 RBM17Q96I25 401 aaKnown RBP13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 MXD3Q9BW11 206 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 KIAA1551Q9HCM1 1747 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 CABP5Q9NP86 173 aa13.05□□□□□ -0.32
PCDHGA9-202ENST00000616887 CCDC196A0A1B0GTZ2 297 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 ORC4O43929 436 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 CMA1P23946 247 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 BTDP43251 543 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 TFAP4Q01664 338 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 MFSD14BQ5SR56 506 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 C12orf60Q5U649 245 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 DHX40Q8IX18 779 aaKnown RBP13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 FHOD1Q9Y613 1164 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 F8W031 263 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 FOXN1O15353 648 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 PTPN14Q15678 1187 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 SPTY2D1Q68D10 685 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 TMTC3Q6ZXV5 915 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 WASF1Q92558 559 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 MTA3Q9BTC8 594 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 RNF26Q9BY78 433 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 CNTNAP5Q8WYK1 1306 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 MAST2Q6P0Q8 1798 aa13.04□□□□□ -0.32
PCDHGA9-202ENST00000616887 CTAGE5O15320 804 aa13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 SAFBQ15424 915 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 AOPEPQ8N6M6 819 aa13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 KIAA1468Q9P260 1216 aa13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 SYKP43405 635 aa13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 PDE4BQ07343 736 aa13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 NPY5RQ15761 445 aa13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 SBK1Q52WX2 424 aa13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 USP49Q70CQ1 688 aa13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 LCMT1Q9UIC8 334 aa13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 HPSEQ9Y251 543 aa13.03□□□□□ -0.32
PCDHGA9-202ENST00000616887 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 PPP6R2O75170 966 aa13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 SLU7O95391 586 aaKnown RBP13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 ATP2B4P23634 1241 aa13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 PLA2G4AP47712 749 aa13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 ZNF75DP51815 510 aa13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 GTF2IP78347 998 aa13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 PNOCQ13519 176 aa13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 ERCC6LQ2NKX8 1250 aa13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 TEX35Q5T0J7 233 aa13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 CPVLQ9H3G5 476 aa13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 TRMT1Q9NXH9 659 aaKnown RBP13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 CLIP2Q9UDT6 1046 aa13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 LAMB1P07942 1786 aa13.02□□□□□ -0.32
PCDHGA9-202ENST00000616887 CCDC88AQ3V6T2 1871 aa13.02□□□□□ -0.33
PCDHGA9-202ENST00000616887 MYO1CO00159 1063 aa13.02□□□□□ -0.33
PCDHGA9-202ENST00000616887 SLC3A2P08195 630 aaKnown RBP13.02□□□□□ -0.33
PCDHGA9-202ENST00000616887 RCAN1P53805 252 aa13.02□□□□□ -0.33
PCDHGA9-202ENST00000616887 LONRF3Q496Y0 759 aa13.02□□□□□ -0.33
PCDHGA9-202ENST00000616887 FOXP1Q9H334 677 aaPredicted RBP13.02□□□□□ -0.33
PCDHGA9-202ENST00000616887 PNMA6AP0CW24 399 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 IL1R1P14778 569 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 HOXA10P31260 410 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 ARID5BQ14865 1188 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 SLC35G1Q2M3R5 365 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 RESP18Q5W5W9 173 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 PLA2G4DQ86XP0 818 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 PHF20Q9BVI0 1012 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 GOLGA6L19H0YKK7 550 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 DDAH1O94760 285 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 SLURP2P0DP57 97 aa13.01□□□□□ -0.33
PCDHGA9-202ENST00000616887 MMP14P50281 582 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms