RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 MYH4Q9Y623 1939 aa11.55□□□□□ -0.56
AL353770.3-201ENST00000616253 TOP1P11387 765 aaKnown RBP11.55□□□□□ -0.56
AL353770.3-201ENST00000616253 SCG2P13521 617 aa11.55□□□□□ -0.56
AL353770.3-201ENST00000616253 NOVP48745 357 aa11.55□□□□□ -0.56
AL353770.3-201ENST00000616253 GNAQP50148 359 aa11.55□□□□□ -0.56
AL353770.3-201ENST00000616253 CAMK4Q16566 473 aa11.55□□□□□ -0.56
AL353770.3-201ENST00000616253 NIM1KQ8IY84 436 aa11.55□□□□□ -0.56
AL353770.3-201ENST00000616253 SYT17Q9BSW7 474 aa11.55□□□□□ -0.56
AL353770.3-201ENST00000616253 EHD4Q9H223 541 aa11.55□□□□□ -0.56
AL353770.3-201ENST00000616253 VPS33BQ9H267 617 aa11.55□□□□□ -0.56
AL353770.3-201ENST00000616253 CLSTN2Q9H4D0 955 aa11.55□□□□□ -0.56
AL353770.3-201ENST00000616253 TDRD3Q9H7E2 651 aaKnown RBP11.55□□□□□ -0.56
AL353770.3-201ENST00000616253 DDTLA6NHG4 134 aaPredicted RBP11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 VIL1P09327 827 aaKnown RBP11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 SLURP2P0DP57 97 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 KRT2P35908 639 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 SLC39A14Q15043 492 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 PFKFB3Q16875 520 aaPredicted RBP11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 ADALQ6DHV7 355 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 CCDC73Q6ZRK6 1079 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 KLHL34Q8N239 644 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 FSIP1Q8NA03 581 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 MRPS27Q92552 414 aaKnown RBP11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 DHX36Q9H2U1 1008 aaKnown RBP11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 DNAJC18Q9H819 358 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 MTMR4Q9NYA4 1195 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 IGKV6D-41A0A0C4DH26 115 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 A0A1W2PQ27 194 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 A0A1W2PQ64 194 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 A0A1W2PQD8 194 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 PALM3A6NDB9 673 aaPredicted RBP11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 NPM3O75607 178 aaKnown RBP11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 GOLGA8HP0CJ92 632 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 PTPAQ15257 358 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 MAP3K11Q16584 847 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 SLC35G1Q2M3R5 365 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 SH3BP5LQ7L8J4 393 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 CLEC10AQ8IUN9 316 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 ZSCAN29Q8IWY8 852 aaPredicted RBP11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 PRMT6Q96LA8 375 aaPredicted RBP11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 GMLQ99445 158 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 TNMDQ9H2S6 317 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 ZNRF3Q9ULT6 936 aa11.54□□□□□ -0.56
AL353770.3-201ENST00000616253 PARP1P09874 1014 aaKnown RBP11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 VEGFAP15692 232 aaPredicted RBP11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 MARCKSP29966 332 aaPredicted RBP11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 TOB1P50616 345 aaPredicted RBP11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 EIF6P56537 245 aaKnown RBP11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 FAM160A1Q05DH4 1040 aa11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 LRRC47Q8N1G4 583 aaKnown RBP11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 FUCA2Q9BTY2 467 aa11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 TAOK3Q9H2K8 898 aa11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 BRMS1Q9HCU9 246 aa11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 PI4KBQ9UBF8 816 aa11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 HDAC9Q9UKV0 1011 aa11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
AL353770.3-201ENST00000616253 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 FAM196BA6NMK8 535 aa11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 MPHOSPH10O00566 681 aaKnown RBP11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 CYTH3O43739 400 aa11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 SPDYE6P0CI01 402 aa11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 SNW1Q13573 536 aaKnown RBP11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 NPY5RQ15761 445 aa11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 RILPL1Q5EBL4 403 aa11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 USP17L2Q6R6M4 530 aa11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 CKAP2LQ8IYA6 745 aa11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 JMYQ8N9B5 988 aa11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 RNF214Q8ND24 703 aa11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 GPKOWQ92917 476 aaPredicted RBP eCLIP11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 LZTS2Q9BRK4 669 aa11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 TRIM34Q9BYJ4 488 aa11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 FHDC1Q9C0D6 1143 aaPredicted RBP11.52□□□□□ -0.56
AL353770.3-201ENST00000616253 COL2A1P02458 1487 aaPredicted RBP11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 ATRNL1Q5VV63 1379 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 FAM205CA6NFA0 338 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 USP17L5A8MUK1 530 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 KLRF2D3W0D1 207 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 PPP6R2O75170 966 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 ENTPD3O75355 529 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 TTLL1O95922 423 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 NLRP5P59047 1200 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 AXDND1Q5T1B0 1012 aaPredicted RBP11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 ENGASEQ8NFI3 743 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 SPZ1Q9BXG8 430 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 CPVLQ9H3G5 476 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 CABP5Q9NP86 173 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 TMOD2Q9NZR1 351 aa11.52□□□□□ -0.57
AL353770.3-201ENST00000616253 A0A1B0GVL5 298 aa11.51□□□□□ -0.57
AL353770.3-201ENST00000616253 KINO60870 393 aaKnown RBP11.51□□□□□ -0.57
AL353770.3-201ENST00000616253 PDHBP11177 359 aa11.51□□□□□ -0.57
AL353770.3-201ENST00000616253 DLGAP5Q15398 846 aa11.51□□□□□ -0.57
AL353770.3-201ENST00000616253 EARS2Q5JPH6 523 aaKnown RBP11.51□□□□□ -0.57
AL353770.3-201ENST00000616253 RBM43Q6ZSC3 357 aaKnown RBP11.51□□□□□ -0.57
AL353770.3-201ENST00000616253 OGFOD1Q8N543 542 aa11.51□□□□□ -0.57
AL353770.3-201ENST00000616253 TNFRSF25Q93038 417 aa11.51□□□□□ -0.57
AL353770.3-201ENST00000616253 CCDC17Q96LX7 622 aa11.51□□□□□ -0.57
AL353770.3-201ENST00000616253 CLIP2Q9UDT6 1046 aa11.51□□□□□ -0.57
AL353770.3-201ENST00000616253 CD2APQ9Y5K6 639 aa11.51□□□□□ -0.57
AL353770.3-201ENST00000616253 CLRN2A0PK11 232 aa11.5□□□□□ -0.57
AL353770.3-201ENST00000616253 NFKBIEO00221 500 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms