RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ADKP55263 362 aaKnown RBP16.08■□□□□ 0.16
PCDHGA3-202ENST00000612467 GPSM2P81274 684 aa16.08■□□□□ 0.16
PCDHGA3-202ENST00000612467 CNBD1Q8NA66 436 aa16.08■□□□□ 0.16
PCDHGA3-202ENST00000612467 ATP8A2Q9NTI2 1148 aa16.08■□□□□ 0.16
PCDHGA3-202ENST00000612467 RBM28Q9NW13 759 aaKnown RBP16.08■□□□□ 0.16
PCDHGA3-202ENST00000612467 ZNF215Q9UL58 517 aaPredicted RBP16.08■□□□□ 0.16
PCDHGA3-202ENST00000612467 DDAH1O94760 285 aa16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 SCG2P13521 617 aa16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 CDK11BP21127 795 aaKnown RBP16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 DPYDQ12882 1025 aa16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 SYT10Q6XYQ8 523 aa16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 VSTM4Q8IW00 320 aa16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 FAM177A1Q8N128 213 aaPredicted RBP16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 PAGE5Q96GU1 130 aa16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 KIAA1551Q9HCM1 1747 aa16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 C12orf60Q5U649 245 aa16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 PRDM10Q9NQV6 1147 aa16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 ARPP21Q9UBL0 812 aaPredicted RBP16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 STX8Q9UNK0 236 aa16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 CEP131Q9UPN4 1083 aa16.07■□□□□ 0.16
PCDHGA3-202ENST00000612467 SBF2Q86WG5 1849 aa16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 TOP1P11387 765 aaKnown RBP16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 PRR5LQ6MZQ0 368 aa16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 CCDC150Q8NCX0 1101 aa16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 PNMA1Q8ND90 353 aa16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 PLIN2Q99541 437 aa16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 KAT14Q9H8E8 782 aa16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 MKNK2Q9HBH9 465 aa16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 MKRN1Q9UHC7 482 aaKnown RBP16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 PP2D1A8MPX8 630 aa16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 FANCGO15287 622 aa16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 TEX33O43247 280 aa16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 GRAPQ13588 217 aa16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 ZNF579Q8NAF0 562 aaKnown RBP16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 GRAPLQ8TC17 118 aaPredicted RBP16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 COL24A1Q17RW2 1714 aa16.06■□□□□ 0.16
PCDHGA3-202ENST00000612467 CBX1P83916 185 aa16.05■□□□□ 0.16
PCDHGA3-202ENST00000612467 PDCL2Q8N4E4 241 aa16.05■□□□□ 0.16
PCDHGA3-202ENST00000612467 MAPK8IP1Q9UQF2 711 aa16.05■□□□□ 0.16
PCDHGA3-202ENST00000612467 CCDC88AQ3V6T2 1871 aa16.05■□□□□ 0.16
PCDHGA3-202ENST00000612467 CYTH3O43739 400 aa16.05■□□□□ 0.16
PCDHGA3-202ENST00000612467 UFL1O94874 794 aa16.05■□□□□ 0.16
PCDHGA3-202ENST00000612467 NT5DC1Q5TFE4 455 aa16.05■□□□□ 0.16
PCDHGA3-202ENST00000612467 FNBP4Q8N3X1 1017 aaPredicted RBP16.05■□□□□ 0.16
PCDHGA3-202ENST00000612467 ANKRD7Q92527 254 aa16.05■□□□□ 0.16
PCDHGA3-202ENST00000612467 MTRQ99707 1265 aa16.05■□□□□ 0.16
PCDHGA3-202ENST00000612467 LAMB1P07942 1786 aa16.04■□□□□ 0.16
PCDHGA3-202ENST00000612467 DLEC1Q9Y238 1755 aa16.04■□□□□ 0.16
PCDHGA3-202ENST00000612467 CALM1P0DP23 149 aa16.04■□□□□ 0.16
PCDHGA3-202ENST00000612467 CALM2P0DP24 149 aa16.04■□□□□ 0.16
PCDHGA3-202ENST00000612467 CALM3P0DP25 149 aa16.04■□□□□ 0.16
PCDHGA3-202ENST00000612467 PFKFB3Q16875 520 aaPredicted RBP16.04■□□□□ 0.16
PCDHGA3-202ENST00000612467 XDHP47989 1333 aa16.04■□□□□ 0.16
PCDHGA3-202ENST00000612467 SLURP2P0DP57 97 aa16.04■□□□□ 0.16
PCDHGA3-202ENST00000612467 ZNF18P17022 549 aa16.04■□□□□ 0.16
PCDHGA3-202ENST00000612467 SBK1Q52WX2 424 aa16.04■□□□□ 0.16
PCDHGA3-202ENST00000612467 BRMS1Q9HCU9 246 aa16.04■□□□□ 0.16
PCDHGA3-202ENST00000612467 PAXBP1Q9Y5B6 917 aa16.04■□□□□ 0.16
PCDHGA3-202ENST00000612467 TSPY3P0CV98 308 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 TSPY8P0CW00 308 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 CUL4BQ13620 913 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 PPP2R5BQ15173 497 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 CREBRFQ8IUR6 639 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 CPLX3Q8WVH0 158 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 HOOK1Q9UJC3 728 aaKnown RBP16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 SLFN14P0C7P3 912 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 BTDP43251 543 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 ATP2C1P98194 919 aaPredicted RBP16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 HEATR3Q7Z4Q2 680 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 MAP7D2Q96T17 732 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 MAD2L2Q9UI95 211 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 F8W031 263 aaPredicted RBP16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 MTF1Q14872 753 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 KARSQ15046 597 aaKnown RBP16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 CLEC10AQ8IUN9 316 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 TMEM139Q8IV31 216 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 MLKLQ8NB16 471 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 SPATA20Q8TB22 786 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 RPGRQ92834 1020 aaKnown RBP16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 DESI2Q9BSY9 194 aa16.03■□□□□ 0.16
PCDHGA3-202ENST00000612467 A0A0U1RQJ8 604 aa16.02■□□□□ 0.16
PCDHGA3-202ENST00000612467 WWC2Q6AWC2 1192 aa16.02■□□□□ 0.16
PCDHGA3-202ENST00000612467 ATRIPQ8WXE1 791 aa16.02■□□□□ 0.16
PCDHGA3-202ENST00000612467 RTFDC1Q9BY42 306 aaPredicted RBP16.02■□□□□ 0.16
PCDHGA3-202ENST00000612467 TMEM60Q9H2L4 133 aa16.02■□□□□ 0.16
PCDHGA3-202ENST00000612467 VAT1LQ9HCJ6 419 aa16.02■□□□□ 0.16
PCDHGA3-202ENST00000612467 TAF1LQ8IZX4 1826 aa16.02■□□□□ 0.16
PCDHGA3-202ENST00000612467 CBFA2T2O43439 604 aa16.02■□□□□ 0.15
PCDHGA3-202ENST00000612467 INF2Q27J81 1249 aa16.02■□□□□ 0.15
PCDHGA3-202ENST00000612467 TOGARAM2Q6ZUX3 1019 aa16.02■□□□□ 0.15
PCDHGA3-202ENST00000612467 SH3RF1Q7Z6J0 888 aa16.02■□□□□ 0.15
PCDHGA3-202ENST00000612467 ENOX1Q8TC92 643 aaKnown RBP16.02■□□□□ 0.15
PCDHGA3-202ENST00000612467 TMEM47Q9BQJ4 181 aa16.02■□□□□ 0.15
PCDHGA3-202ENST00000612467 MXD3Q9BW11 206 aa16.02■□□□□ 0.15
PCDHGA3-202ENST00000612467 CD209Q9NNX6 404 aa16.02■□□□□ 0.15
PCDHGA3-202ENST00000612467 CTNND2Q9UQB3 1225 aa16.02■□□□□ 0.15
PCDHGA3-202ENST00000612467 ZNF831Q5JPB2 1677 aa16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 RIMBP2O15034 1052 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms