RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 ATP8A2Q9NTI2 1148 aa26.36■■□□□ 1.81
TMEM248-207ENST00000607045 SLC15A5A6NIM6 579 aa26.35■■□□□ 1.81
TMEM248-207ENST00000607045 GLRX3O76003 335 aaKnown RBP26.35■■□□□ 1.81
TMEM248-207ENST00000607045 C12orf60Q5U649 245 aa26.35■■□□□ 1.81
TMEM248-207ENST00000607045 HOXC10Q9NYD6 342 aa26.35■■□□□ 1.81
TMEM248-207ENST00000607045 SWAP70Q9UH65 585 aa26.35■■□□□ 1.81
TMEM248-207ENST00000607045 USP17L12C9JPN9 530 aa26.34■■□□□ 1.81
TMEM248-207ENST00000607045 USP17L21D6R901 530 aa26.34■■□□□ 1.81
TMEM248-207ENST00000607045 UBE3CQ15386 1083 aa26.34■■□□□ 1.81
TMEM248-207ENST00000607045 TMEM179Q6ZVK1 233 aa26.34■■□□□ 1.81
TMEM248-207ENST00000607045 NPLOC4Q8TAT6 608 aa26.34■■□□□ 1.81
TMEM248-207ENST00000607045 LRRCC1Q9C099 1032 aa26.34■■□□□ 1.81
TMEM248-207ENST00000607045 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.34■■□□□ 1.81
TMEM248-207ENST00000607045 PUS7LQ9H0K6 701 aaKnown RBP26.34■■□□□ 1.81
TMEM248-207ENST00000607045 PFASO15067 1338 aa26.34■■□□□ 1.81
TMEM248-207ENST00000607045 SYN1P17600 705 aa26.33■■□□□ 1.81
TMEM248-207ENST00000607045 CDK8P49336 464 aa26.33■■□□□ 1.81
TMEM248-207ENST00000607045 MOV10L1Q9BXT6 1211 aaKnown RBP26.33■■□□□ 1.81
TMEM248-207ENST00000607045 TANGO6Q9C0B7 1094 aa26.33■■□□□ 1.81
TMEM248-207ENST00000607045 ATP2B2Q01814 1243 aa26.32■■□□□ 1.8
TMEM248-207ENST00000607045 GRB14Q14449 540 aa26.32■■□□□ 1.8
TMEM248-207ENST00000607045 SPICE1Q8N0Z3 855 aa26.32■■□□□ 1.8
TMEM248-207ENST00000607045 GDF15Q99988 308 aa26.32■■□□□ 1.8
TMEM248-207ENST00000607045 SLC4A4Q9Y6R1 1079 aa26.32■■□□□ 1.8
TMEM248-207ENST00000607045 IVNS1ABPQ9Y6Y0 642 aa26.32■■□□□ 1.8
TMEM248-207ENST00000607045 DDX60LQ5H9U9 1706 aaKnown RBP26.31■■□□□ 1.8
TMEM248-207ENST00000607045 SOX1O00570 391 aaPredicted RBP26.31■■□□□ 1.8
TMEM248-207ENST00000607045 HOXC6P09630 235 aa26.31■■□□□ 1.8
TMEM248-207ENST00000607045 COL6A1P12109 1028 aa26.31■■□□□ 1.8
TMEM248-207ENST00000607045 CYP2C19P33261 490 aa26.31■■□□□ 1.8
TMEM248-207ENST00000607045 MFSD14CQ5VZR4 134 aa26.31■■□□□ 1.8
TMEM248-207ENST00000607045 TMX2Q9Y320 296 aa26.31■■□□□ 1.8
TMEM248-207ENST00000607045 ALPK3Q96L96 1907 aa26.3■■□□□ 1.8
TMEM248-207ENST00000607045 DSG3P32926 999 aa26.3■■□□□ 1.8
TMEM248-207ENST00000607045 CTR9Q6PD62 1173 aa26.3■■□□□ 1.8
TMEM248-207ENST00000607045 SPATC1LQ9H0A9 340 aa26.3■■□□□ 1.8
TMEM248-207ENST00000607045 ICA1Q05084 483 aa26.29■■□□□ 1.8
TMEM248-207ENST00000607045 TRPV1Q8NER1 839 aa26.29■■□□□ 1.8
TMEM248-207ENST00000607045 NAV1Q8NEY1 1877 aa26.29■■□□□ 1.8
TMEM248-207ENST00000607045 IGHA2P01877 340 aa26.28■■□□□ 1.8
TMEM248-207ENST00000607045 ERCC3P19447 782 aa26.28■■□□□ 1.8
TMEM248-207ENST00000607045 CNGA1P29973 690 aa26.28■■□□□ 1.8
TMEM248-207ENST00000607045 SAMD1Q6SPF0 538 aaPredicted RBP26.28■■□□□ 1.8
TMEM248-207ENST00000607045 C16orf86Q6ZW13 317 aa26.28■■□□□ 1.8
TMEM248-207ENST00000607045 DPP9Q86TI2 863 aa26.28■■□□□ 1.8
TMEM248-207ENST00000607045 ATG4CQ96DT6 458 aa26.28■■□□□ 1.8
TMEM248-207ENST00000607045 CCDC17Q96LX7 622 aa26.28■■□□□ 1.8
TMEM248-207ENST00000607045 VCPKMTQ9H867 229 aa26.28■■□□□ 1.8
TMEM248-207ENST00000607045 ARHGEF10LQ9HCE6 1279 aa26.28■■□□□ 1.8
TMEM248-207ENST00000607045 A0A1W2PPC1 479 aa26.27■■□□□ 1.8
TMEM248-207ENST00000607045 COBLO75128 1261 aa26.27■■□□□ 1.8
TMEM248-207ENST00000607045 FLOT1O75955 427 aa26.27■■□□□ 1.8
TMEM248-207ENST00000607045 EEF2P13639 858 aaKnown RBP26.27■■□□□ 1.8
TMEM248-207ENST00000607045 ADORA2AP29274 412 aa26.27■■□□□ 1.8
TMEM248-207ENST00000607045 PLS1Q14651 629 aa26.27■■□□□ 1.8
TMEM248-207ENST00000607045 LRRC26Q2I0M4 334 aa26.27■■□□□ 1.8
TMEM248-207ENST00000607045 TSHZ3Q63HK5 1081 aa26.27■■□□□ 1.8
TMEM248-207ENST00000607045 ZSCAN25Q6NSZ9 544 aa26.27■■□□□ 1.8
TMEM248-207ENST00000607045 LRCH3Q96II8 777 aa26.27■■□□□ 1.8
TMEM248-207ENST00000607045 DCTPP1Q9H773 170 aa26.27■■□□□ 1.8
TMEM248-207ENST00000607045 ECHDC1Q9NTX5 307 aa26.27■■□□□ 1.8
TMEM248-207ENST00000607045 LAMA2P24043 3122 aaKnown RBP26.26■■□□□ 1.79
TMEM248-207ENST00000607045 A0A0C4DFX4 3053 aa26.26■■□□□ 1.79
TMEM248-207ENST00000607045 STRNO43815 780 aa26.26■■□□□ 1.79
TMEM248-207ENST00000607045 BMP8BP34820 402 aa26.26■■□□□ 1.79
TMEM248-207ENST00000607045 LPAR1Q92633 364 aa26.26■■□□□ 1.79
TMEM248-207ENST00000607045 STRBPQ96SI9 672 aaKnown RBP26.26■■□□□ 1.79
TMEM248-207ENST00000607045 DDX20Q9UHI6 824 aaKnown RBP26.26■■□□□ 1.79
TMEM248-207ENST00000607045 COL6A3P12111 3177 aa26.26■■□□□ 1.79
TMEM248-207ENST00000607045 MAGEA10P43363 369 aaPredicted RBP26.25■■□□□ 1.79
TMEM248-207ENST00000607045 AMOTL1Q8IY63 956 aa26.25■■□□□ 1.79
TMEM248-207ENST00000607045 STK11IPQ8N1F8 1099 aa26.25■■□□□ 1.79
TMEM248-207ENST00000607045 SHCBP1Q8NEM2 672 aa26.25■■□□□ 1.79
TMEM248-207ENST00000607045 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.25■■□□□ 1.79
TMEM248-207ENST00000607045 NCAPG2Q86XI2 1143 aa26.24■■□□□ 1.79
TMEM248-207ENST00000607045 DDRGK1Q96HY6 314 aa26.24■■□□□ 1.79
TMEM248-207ENST00000607045 SENP6Q9GZR1 1112 aaPredicted RBP26.24■■□□□ 1.79
TMEM248-207ENST00000607045 KANSL2Q9H9L4 492 aa26.24■■□□□ 1.79
TMEM248-207ENST00000607045 FBXO28Q9NVF7 368 aa26.24■■□□□ 1.79
TMEM248-207ENST00000607045 BAZ2AQ9UIF9 1905 aaKnown RBP26.24■■□□□ 1.79
TMEM248-207ENST00000607045 GSG1L2A8MUP6 293 aa26.23■■□□□ 1.79
TMEM248-207ENST00000607045 TMEM132BQ14DG7 1078 aa26.23■■□□□ 1.79
TMEM248-207ENST00000607045 PRAMEF19Q5SWL8 479 aa26.23■■□□□ 1.79
TMEM248-207ENST00000607045 MB21D1Q8N884 522 aa26.23■■□□□ 1.79
TMEM248-207ENST00000607045 OSBP2Q969R2 916 aa26.23■■□□□ 1.79
TMEM248-207ENST00000607045 SH2D4AQ9H788 454 aa26.23■■□□□ 1.79
TMEM248-207ENST00000607045 WDR46O15213 610 aaKnown RBP26.22■■□□□ 1.79
TMEM248-207ENST00000607045 CYBAP13498 195 aa26.22■■□□□ 1.79
TMEM248-207ENST00000607045 MROH8Q9H579 483 aa26.22■■□□□ 1.79
TMEM248-207ENST00000607045 ADAMTS5Q9UNA0 930 aa26.22■■□□□ 1.79
TMEM248-207ENST00000607045 RLFQ13129 1914 aa26.22■■□□□ 1.79
TMEM248-207ENST00000607045 ANO1Q5XXA6 986 aa26.21■■□□□ 1.79
TMEM248-207ENST00000607045 OLFML2BQ68BL8 750 aa26.21■■□□□ 1.79
TMEM248-207ENST00000607045 KBTBD3Q8NAB2 608 aa26.21■■□□□ 1.79
TMEM248-207ENST00000607045 RAD21O60216 631 aa26.2■■□□□ 1.78
TMEM248-207ENST00000607045 MINDY4BA8MYZ0 360 aa26.19■■□□□ 1.78
TMEM248-207ENST00000607045 RNF113AO15541 343 aaKnown RBP26.19■■□□□ 1.78
TMEM248-207ENST00000607045 ATN1P54259 1190 aaPredicted RBP26.19■■□□□ 1.78
TMEM248-207ENST00000607045 SBK1Q52WX2 424 aa26.19■■□□□ 1.78
TMEM248-207ENST00000607045 GJC2Q5T442 439 aaPredicted RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms