RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 BMP6P22004 513 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 PTPREP23469 700 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 CDK8P49336 464 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 TMC6Q7Z403 805 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 CREBRFQ8IUR6 639 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 KIAA1524Q8TCG1 905 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 FAM205AQ6ZU69 1335 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 STX17P56962 302 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 GSTO1P78417 241 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 TCP10Q12799 353 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 NPY5RQ15761 445 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 LRRC47Q8N1G4 583 aaKnown RBP18.2■□□□□ 0.5
CTSA-214ENST00000606788 CERS5Q8N5B7 392 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 ZNF592Q92610 1267 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 DPF2Q92785 391 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 RBM28Q9NW13 759 aaKnown RBP18.2■□□□□ 0.5
CTSA-214ENST00000606788 TIAM2Q8IVF5 1701 aa18.2■□□□□ 0.5
CTSA-214ENST00000606788 LDHCP07864 332 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 FGRP09769 529 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 SYMPKQ92797 1274 aaKnown RBP18.19■□□□□ 0.5
CTSA-214ENST00000606788 FLT1P17948 1338 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 BBOX1O75936 387 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 DDAH1O94760 285 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 SBK1Q52WX2 424 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 TTC38Q5R3I4 469 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 KIAA0825Q8IV33 1275 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 BLZF1Q9H2G9 400 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 BRMS1Q9HCU9 246 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 DAGLAQ9Y4D2 1042 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 SBF2Q86WG5 1849 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 CYTH3O43739 400 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 CHRNA5P30532 468 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 RBM5P52756 815 aaKnown RBP eCLIP18.19■□□□□ 0.51e-13■■■□□ 18.6
CTSA-214ENST00000606788 SLC27A3Q5K4L6 730 aa18.19■□□□□ 0.5
CTSA-214ENST00000606788 DPP8Q6V1X1 898 aaPredicted RBP18.19■□□□□ 0.5
CTSA-214ENST00000606788 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.19■□□□□ 0.5
CTSA-214ENST00000606788 CALM1P0DP23 149 aa18.18■□□□□ 0.5
CTSA-214ENST00000606788 CALM2P0DP24 149 aa18.18■□□□□ 0.5
CTSA-214ENST00000606788 CALM3P0DP25 149 aa18.18■□□□□ 0.5
CTSA-214ENST00000606788 SHROOM1Q2M3G4 852 aaPredicted RBP18.18■□□□□ 0.5
CTSA-214ENST00000606788 CEP95Q96GE4 821 aa18.18■□□□□ 0.5
CTSA-214ENST00000606788 FANCLQ9NW38 375 aa18.18■□□□□ 0.5
CTSA-214ENST00000606788 MYH6P13533 1939 aa18.18■□□□□ 0.5
CTSA-214ENST00000606788 USP27XA6NNY8 438 aa18.18■□□□□ 0.5
CTSA-214ENST00000606788 MPHOSPH10O00566 681 aaKnown RBP18.17■□□□□ 0.5
CTSA-214ENST00000606788 SERPINC1P01008 464 aa18.17■□□□□ 0.5
CTSA-214ENST00000606788 POSTNQ15063 836 aa18.17■□□□□ 0.5
CTSA-214ENST00000606788 DDX4Q9NQI0 724 aaKnown RBP18.17■□□□□ 0.5
CTSA-214ENST00000606788 PP2D1A8MPX8 630 aa18.17■□□□□ 0.5
CTSA-214ENST00000606788 RHBDL3P58872 404 aa18.17■□□□□ 0.5
CTSA-214ENST00000606788 NCAPHQ15003 741 aa18.17■□□□□ 0.5
CTSA-214ENST00000606788 KIF5BP33176 963 aa18.17■□□□□ 0.5
CTSA-214ENST00000606788 INF2Q27J81 1249 aa18.17■□□□□ 0.5
CTSA-214ENST00000606788 MAD2L2Q9UI95 211 aa18.17■□□□□ 0.5
CTSA-214ENST00000606788 MAPK8IP1Q9UQF2 711 aa18.17■□□□□ 0.5
CTSA-214ENST00000606788 COL24A1Q17RW2 1714 aa18.16■□□□□ 0.5
CTSA-214ENST00000606788 KLRF2D3W0D1 207 aa18.16■□□□□ 0.5
CTSA-214ENST00000606788 CFAP100Q494V2 611 aa18.16■□□□□ 0.5
CTSA-214ENST00000606788 RASSF8Q8NHQ8 419 aa18.16■□□□□ 0.5
CTSA-214ENST00000606788 PDGFDQ9GZP0 370 aaPredicted RBP18.16■□□□□ 0.5
CTSA-214ENST00000606788 MAN1B1Q9UKM7 699 aa18.16■□□□□ 0.5
CTSA-214ENST00000606788 SRPRBQ9Y5M8 271 aaKnown RBP18.16■□□□□ 0.5
CTSA-214ENST00000606788 TMEM232C9JQI7 657 aa18.16■□□□□ 0.5
CTSA-214ENST00000606788 SRGNP10124 158 aa18.16■□□□□ 0.5
CTSA-214ENST00000606788 FMR1Q06787 632 aaKnown RBP eCLIP18.16■□□□□ 0.5
CTSA-214ENST00000606788 WWC2Q6AWC2 1192 aa18.16■□□□□ 0.5
CTSA-214ENST00000606788 GPCPD1Q9NPB8 672 aa18.16■□□□□ 0.5
CTSA-214ENST00000606788 RGL2O15211 777 aa18.15■□□□□ 0.5
CTSA-214ENST00000606788 IL1R1P14778 569 aa18.15■□□□□ 0.5
CTSA-214ENST00000606788 NFIAQ12857 509 aa18.15■□□□□ 0.5
CTSA-214ENST00000606788 PFKFB3Q16875 520 aaPredicted RBP18.15■□□□□ 0.5
CTSA-214ENST00000606788 GPR75-ASB3A0A0A6YYF3 556 aa18.15■□□□□ 0.5
CTSA-214ENST00000606788 USP17L5A8MUK1 530 aa18.15■□□□□ 0.5
CTSA-214ENST00000606788 SKILP12757 684 aa18.15■□□□□ 0.5
CTSA-214ENST00000606788 FANCCQ00597 558 aa18.15■□□□□ 0.5
CTSA-214ENST00000606788 ZFPM1Q8IX07 1006 aa18.15■□□□□ 0.5
CTSA-214ENST00000606788 MTA3Q9BTC8 594 aa18.15■□□□□ 0.5
CTSA-214ENST00000606788 USP40Q9NVE5 1235 aa18.15■□□□□ 0.5
CTSA-214ENST00000606788 PARP3Q9Y6F1 533 aa18.15■□□□□ 0.5
CTSA-214ENST00000606788 LY75O60449 1722 aa18.15■□□□□ 0.5
CTSA-214ENST00000606788 PDS5AQ29RF7 1337 aaKnown RBP18.15■□□□□ 0.5
CTSA-214ENST00000606788 LRRC8AQ8IWT6 810 aa18.14■□□□□ 0.5
CTSA-214ENST00000606788 SMARCE1Q969G3 411 aa18.14■□□□□ 0.5
CTSA-214ENST00000606788 CAVIN2O95810 425 aa18.14■□□□□ 0.49
CTSA-214ENST00000606788 CEP131Q9UPN4 1083 aa18.14■□□□□ 0.49
CTSA-214ENST00000606788 AKR1B1P15121 316 aa18.14■□□□□ 0.49
CTSA-214ENST00000606788 PPP4CP60510 307 aa18.14■□□□□ 0.49
CTSA-214ENST00000606788 RBM6P78332 1123 aaKnown RBP18.14■□□□□ 0.49
CTSA-214ENST00000606788 TPD52L1Q16890 204 aaPredicted RBP18.14■□□□□ 0.49
CTSA-214ENST00000606788 ATP6V0A2Q9Y487 856 aa18.14■□□□□ 0.49
CTSA-214ENST00000606788 NID2Q14112 1375 aa18.14■□□□□ 0.49
CTSA-214ENST00000606788 PCP11498 1178 aaKnown RBP18.13■□□□□ 0.49
CTSA-214ENST00000606788 CDK11BP21127 795 aaKnown RBP18.13■□□□□ 0.49
CTSA-214ENST00000606788 DHX8Q14562 1220 aaKnown RBP18.13■□□□□ 0.49
CTSA-214ENST00000606788 IL17AQ16552 155 aa18.13■□□□□ 0.49
CTSA-214ENST00000606788 ZSCAN29Q8IWY8 852 aaPredicted RBP18.13■□□□□ 0.49
CTSA-214ENST00000606788 BLIDQ8IZY5 108 aa18.13■□□□□ 0.49
CTSA-214ENST00000606788 HSD3B7Q9H2F3 369 aa18.13■□□□□ 0.49
CTSA-214ENST00000606788 TUBE1Q9UJT0 475 aa18.13■□□□□ 0.49
CTSA-214ENST00000606788 CCDC88AQ3V6T2 1871 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms