RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 RAPGEF1Q13905 1077 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 DALRD3Q5D0E6 543 aaKnown RBP5.36□□□□□ -1.55
LINC01109-201ENST00000603837 CCDC30Q5VVM6 783 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 ERAP2Q6P179 960 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 CCDC73Q6ZRK6 1079 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 SH3RF1Q7Z6J0 888 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 CATIPQ7Z7H3 387 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 MYLK4Q86YV6 388 aaPredicted RBP5.36□□□□□ -1.55
LINC01109-201ENST00000603837 WDR63Q8IWG1 891 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 VPS52Q8N1B4 723 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 GOLGA1Q92805 767 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 HVCN1Q96D96 273 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 OSBPL2Q9H1P3 480 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 UBAP1Q9NZ09 502 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 PKD2L1Q9P0L9 805 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 BLMP54132 1417 aaPredicted RBP5.36□□□□□ -1.55
LINC01109-201ENST00000603837 ZNF518AQ6AHZ1 1483 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 PRPF3O43395 683 aaKnown RBP5.36□□□□□ -1.55
LINC01109-201ENST00000603837 MYO1BO43795 1136 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 GDF9O60383 454 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 GPR37L1O60883 481 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 RPS6KA5O75582 802 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 CDKL5O76039 1030 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 CYP2E1P05181 493 aaPredicted RBP5.36□□□□□ -1.55
LINC01109-201ENST00000603837 VARSP26640 1264 aaKnown RBP5.36□□□□□ -1.55
LINC01109-201ENST00000603837 CDKN1CP49918 316 aaPredicted RBP5.36□□□□□ -1.55
LINC01109-201ENST00000603837 SH3BGRP55822 239 aaPredicted RBP5.36□□□□□ -1.55
LINC01109-201ENST00000603837 NUCB1Q02818 461 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 SPHKAPQ2M3C7 1700 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 C4orf48Q5BLP8 95 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 HHATQ5VTY9 493 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 ZBTB33Q86T24 672 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 TMEM110Q86TL2 294 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 NLRP13Q86W25 1043 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 MRFAP1L1Q96HT8 127 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 NACA2Q9H009 215 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 FAM107BQ9H098 131 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 ARNT2Q9HBZ2 717 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 CUEDC1Q9NWM3 386 aaPredicted RBP5.36□□□□□ -1.55
LINC01109-201ENST00000603837 BLOC1S6Q9UL45 172 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 ZNF652Q9Y2D9 606 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 GPSM3Q9Y4H4 160 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 MYOM1P52179 1685 aa5.36□□□□□ -1.55
LINC01109-201ENST00000603837 CEP152O94986 1710 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 FAM221BA6H8Z2 402 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 PALM3A6NDB9 673 aaPredicted RBP5.35□□□□□ -1.55
LINC01109-201ENST00000603837 ATP8B1O43520 1251 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 B3GALNT1O75752 331 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 SLC4A1P02730 911 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 PTGS1P23219 599 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 SCRN1Q12765 414 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 SMC1AQ14683 1233 aaKnown RBP5.35□□□□□ -1.55
LINC01109-201ENST00000603837 PLEKHO1Q53GL0 409 aaPredicted RBP5.35□□□□□ -1.55
LINC01109-201ENST00000603837 FOXR1Q6PIV2 292 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 FBXO33Q7Z6M2 555 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 NCAPG2Q86XI2 1143 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 PARD3BQ8TEW8 1205 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 USP33Q8TEY7 942 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 C17orf50Q8WW18 174 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 POLR3CQ9BUI4 534 aaPredicted RBP5.35□□□□□ -1.55
LINC01109-201ENST00000603837 UBXN6Q9BZV1 441 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 CLIP2Q9UDT6 1046 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 ADAM21Q9UKJ8 722 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.35□□□□□ -1.55
LINC01109-201ENST00000603837 IKBKGQ9Y6K9 419 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 PARD3Q8TEW0 1356 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 PRAG1Q86YV5 1406 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 STRCQ7RTU9 1775 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 ZBBXA8MT70 800 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 RASA4O43374 803 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 IMPDH2P12268 514 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 TNFAIP3P21580 790 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 PRPHP41219 470 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 SNX1Q13596 522 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 GALNT17Q6IS24 598 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 SYNE3Q6ZMZ3 975 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 TRIM67Q6ZTA4 783 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 FAM47EQ6ZV65 393 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 METTL16Q86W50 562 aaKnown RBP5.35□□□□□ -1.55
LINC01109-201ENST00000603837 DCLK2Q8N568 766 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 KAT2BQ92831 832 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 GPR101Q96P66 508 aaPredicted RBP5.35□□□□□ -1.55
LINC01109-201ENST00000603837 MMTAG2Q9BU76 263 aaKnown RBP5.35□□□□□ -1.55
LINC01109-201ENST00000603837 PPP1R12CQ9BZL4 782 aa5.35□□□□□ -1.55
LINC01109-201ENST00000603837 A0A1B0GUA9 196 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 PYGLP06737 847 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 HCLS1P14317 486 aaPredicted RBP5.34□□□□□ -1.55
LINC01109-201ENST00000603837 PECAM1P16284 738 aaPredicted RBP5.34□□□□□ -1.55
LINC01109-201ENST00000603837 GPTP24298 496 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 SEC13P55735 322 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 ERCC6LQ2NKX8 1250 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 ANO1Q5XXA6 986 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 FAAH2Q6GMR7 532 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 MILR1Q7Z6M3 343 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 E2F7Q96AV8 911 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 DDX11Q96FC9 970 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 MAP3K14Q99558 947 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 KIF9Q9HAQ2 790 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 RIC8AQ9NPQ8 531 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 C9orf78Q9NZ63 289 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms